CK939415

Overview
NameCK939415
Unique NameCK939415
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK939415_ssr813 microsatellite CK939415_ssr813:813..824. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1117 contig Csv1_Contig1117:62..926. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK939415 vs. ExPASy Swiss-Prot
Match: GSTF3_ARATH (Glutathione S-transferase ERD13 OS=Arabidopsis thaliana GN=ERD13 PE=1 SV=3)

HSP 1 Score: 289.656 bits (740), Expect = 1.481e-77
Identity = 133/207 (64.25%), Postives = 172/207 (83.09%), Query Frame = 2
Query:   62 MVVKVYGPAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDWKHVSAWWDDISNRPSWKKV 682
            MV+ +Y P +AS KR ++ LVEK + FETV VDL+KGEQR PEYL +QPFG++PV+ DGD+ ++ESRAIMRY AEKYRSQG +LLGKTIEERG VEQWL+VEA +Y+P +  LT+ ++F+   G P DEK++KES+EKL + LDVYE +LSK++YLAGDF SLADL+H+PFT YLVGP+G+ H+I+D KHVSAWWD IS+R +WK+V
Sbjct:    1 MVLTIYAPLFASSKRAVVTLVEKGVSFETVNVDLMKGEQRQPEYLAIQPFGKIPVLVDGDYKIFESRAIMRYIAEKYRSQGPDLLGKTIEERGQVEQWLDVEATSYHPPLLALTLNIVFAPLMGFPADEKVIKESEEKLAEVLDVYEAQLSKNEYLAGDFVSLADLAHLPFTEYLVGPIGKAHLIKDRKHVSAWWDKISSRAAWKEV 207          
BLAST of CK939415 vs. ExPASy Swiss-Prot
Match: GSTF7_ARATH (Glutathione S-transferase OS=Arabidopsis thaliana GN=At3g03190 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.220e-55
Identity = 105/211 (49.76%), Postives = 148/211 (70.14%), Query Frame = 2
Query:   62 MVVKVYGPAYAS-PKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDWKHVSAWWDDISNRPSWKKVLEL 691
            MVVKVYG   A+ P+RV+LC +EK+IEFE + VDL K EQ+ P++L  QPFG++P I+DG   L+ESRAI RYYA KY  QGT+LLGKT+E R +V+QW+EVE + +      L + ++F  K G+P D  LV+E   K  K LDVYE RL+ ++YL GD F+LADLSH+P   Y++       ++   ++++ WW++IS RP+WKK++EL
Sbjct:    1 MVVKVYGQIKAANPQRVLLCFLEKDIEFEVIHVDLDKLEQKKPQHLLRQPFGQVPAIEDGYLKLFESRAIARYYATKYADQGTDLLGKTLEGRAIVDQWVEVENNYFYAVALPLVMNVVFKPKSGKPCDVALVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLSHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARPAWKKLMEL 211          
BLAST of CK939415 vs. ExPASy Swiss-Prot
Match: GSTF1_ORYSJ (Probable glutathione S-transferase GSTF1 OS=Oryza sativa subsp. japonica GN=GSTF1 PE=1 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 7.419e-45
Identity = 96/208 (46.15%), Postives = 132/208 (63.46%), Query Frame = 2
Query:   68 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGK-TIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKF-GRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDWKHVSAWWDDISNRPSWKKV 682
            VKV+GPA ++   RV+LCL E   E+E V VD    E +SPE+LK  PFG++P  QDGD  L+ESRAI +Y   KY+++  +LL +  + E  +V+ W EVE H YN AI  +  + + +    G P ++K+V ES EKL K L+VYE RLS+S YLAGDF S ADL+H P+T Y +G      +   + HV AWW+ +  RPS KK+
Sbjct:    4 VKVFGPAQSTNVARVLLCLEEVGAEYEVVNVDFTVMEHKSPEHLKRNPFGQIPAFQDGDLYLFESRAIGKYILRKYKTREADLLREGNLREAAMVDVWTEVETHQYNSAISPIVYECIINPAMRGIPTNQKVVDESAEKLKKVLEVYEARLSQSTYLAGDFVSFADLNHFPYTFYFMG-TPYASLFDSYPHVKAWWERLMARPSVKKL 210          
BLAST of CK939415 vs. ExPASy Swiss-Prot
Match: GSTF_HYOMU (Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.280e-44
Identity = 88/210 (41.90%), Postives = 131/210 (62.38%), Query Frame = 2
Query:   62 MVVKVYGPAYA-SPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDWKHVSAWWDDISNRPSWKKVLE 688
            M +K++GPA + +  RVI  L EK+++FE VPV++  G+ +   ++ L PFG++P  +DGD  L+ESRAI +Y A  Y  +G +LL    ++  ++  W+EVE+  ++P   +LT +++     G   D+  V E++EKLGK LDVYE RL  SKYL GD F+LADL H P  +YL+G   +  +     HVSAW  DI  RP+W K +E
Sbjct:    1 MGMKLHGPAMSPAVMRVIATLKEKDLDFELVPVNMQAGDHKKEPFITLNPFGQVPAFEDGDLKLFESRAITQYIAHTYADKGNQLLANDPKKMAIMSVWMEVESQKFDPVASKLTFEIVIKPMLGMVTDDAAVAENEEKLGKVLDVYESRLKDSKYLGGDSFTLADLHHAPAMNYLMGTKVKS-LFDSRPHVSAWCADILARPAWSKAIE 209          
BLAST of CK939415 vs. ExPASy Swiss-Prot
Match: GSTF_SILCU (Glutathione S-transferase OS=Silene cucubalus GN=GST PE=1 SV=3)

HSP 1 Score: 176.407 bits (446), Expect = 1.827e-43
Identity = 93/216 (43.06%), Postives = 135/216 (62.50%), Query Frame = 2
Query:   62 MVVKVYG-PAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRY--YAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYL-AGDFFSLADLSHIPFTHYLVGPMGRQHMIRDWKHVSAWWDDISNRPSWKKVLELCK 697
            M +KV+G P   + +RV++ L EK +EFE VP+D+  G  + P YL L PFG++P ++DG+  L+ESRAI +Y  Y   ++++GT L+ K   E      W EVEAH ++P   +L  +L+F   FG   D  +V+E++ KL K LDVYE RL++S+YL A D F+L DL H+P   YL+G   ++ +  +  HVSAW   I  RPSW+K L L K
Sbjct:    1 MTIKVHGNPRSTATQRVLVALYEKHLEFEFVPIDMGAGGHKQPSYLALNPFGQVPALEDGEIKLFESRAITKYLAYTHDHQNEGTSLIHKEKHEMAAQLVWEEVEAHQFDPVASKLAWELVFKGIFGMQTDTTVVEENEAKLAKVLDVYEARLTESEYLGANDSFTLVDLHHLPLLGYLMGTQVKK-LFEERAHVSAWCKKILARPSWEKTLALQK 215          
BLAST of CK939415 vs. ExPASy Swiss-Prot
Match: GSTF2_TOBAC (Glutathione S-transferase APIC OS=Nicotiana tabacum GN=APIC PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.184e-42
Identity = 89/210 (42.38%), Postives = 128/210 (60.95%), Query Frame = 2
Query:   62 MVVKVYG-PAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDWKHVSAWWDDISNRPSWKKVLE 688
            M +KV+G P   +  RV  CL+EK+++FE VPVD++ GE +   YL L PFG++P  +DGD  L+ESRAI +Y A  Y   G +L+ +  ++  ++  W+EVE   + P   +LT +L      G   D+  VKES+ +L K LD+YE RL++SKYL GD F+L DL HIP  +YL+    ++ +      VSAW  DI  RP+W K LE
Sbjct:    1 MAIKVHGSPMSTATMRVAACLIEKDLDFELVPVDMVSGEHKKHPYLSLNPFGQVPAFEDGDLKLFESRAITQYIAHVYADNGYQLILQDPKKMPIMSVWMEVEGQKFEPHASKLTWELGIKPIIGMTTDDDAVKESEVQLSKVLDIYETRLAESKYLGGDSFTLVDLHHIPNIYYLMSTKVKE-VFDSRPRVSAWCADILARPAWVKGLE 209          
BLAST of CK939415 vs. ExPASy Swiss-Prot
Match: GSTF2_ORYSJ (Probable glutathione S-transferase GSTF2 OS=Oryza sativa subsp. japonica GN=GSTF2 PE=1 SV=3)

HSP 1 Score: 170.629 bits (431), Expect = 1.003e-41
Identity = 92/214 (42.99%), Postives = 133/214 (62.15%), Query Frame = 2
Query:   68 VKVYGPAYA-SPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQ-LLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDWKHVSAWWDDISNRPSWKKVLELCKTP 703
            +K+YG   + +  R +  L E   E+E VP+D  KGE ++P++L   PFG++P +QDGD  L+ESRAI +Y   K + +   L    ++E  +V+ WLEVE++ Y PA+  +  Q L+    FG P DEK+V+E+ EKL K L+VYE RL+K KYLAGD+ S+ADLSH+  T   +G      ++  + HV AWW D+  RPS +KV  L K P
Sbjct:    4 MKLYGSTLSWNVTRCVAVLEEAGAEYEIVPLDFSKGEHKAPDHLARNPFGQVPALQDGDLFLWESRAICKYVCRKNKPE--LLKDGDLKESAMVDVWLEVESNQYTPALNPILFQCLIRPMMFGAPPDEKVVEENLEKLKKVLEVYEARLTKCKYLAGDYISVADLSHVAGT-VCLGATPHASVLDAYPHVKAWWTDLMARPSSQKVASLMKPP 214          
BLAST of CK939415 vs. ExPASy Swiss-Prot
Match: GSTF1_TOBAC (Glutathione S-transferase PARB OS=Nicotiana tabacum GN=PARB PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.003e-41
Identity = 89/210 (42.38%), Postives = 126/210 (60.00%), Query Frame = 2
Query:   62 MVVKVYG-PAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDWKHVSAWWDDISNRPSWKKVLE 688
            M +KV+G P   +  RV  CL+EKE++FE VPVD+  GE +   YL L PFG++P  +DGD  L+ESRAI +Y A  Y   G +L+ +  ++   +  W+EVE   + P   +LT +L      G   D+  VKES+ +L K LD+YE +L++SKYL GD F+L DL HIP  +YL+    ++ +      VSAW  DI  RP+W K LE
Sbjct:    1 MAIKVHGSPMSTATMRVAACLIEKELDFEFVPVDMASGEHKKHPYLSLNPFGQVPAFEDGDLKLFESRAITQYIAHVYADNGYQLILQDPKKMPSMSVWMEVEGQKFEPPATKLTWELGIKPIIGMTTDDAAVKESEAQLSKVLDIYETQLAESKYLGGDSFTLVDLHHIPNIYYLMSSKVKE-VFDSRPRVSAWCADILARPAWVKGLE 209          
BLAST of CK939415 vs. ExPASy Swiss-Prot
Match: GSTF6_ARATH (Glutathione S-transferase 6, chloroplastic OS=Arabidopsis thaliana GN=GST6 PE=1 SV=3)

HSP 1 Score: 170.244 bits (430), Expect = 1.310e-41
Identity = 87/212 (41.04%), Postives = 131/212 (61.79%), Query Frame = 2
Query:   68 VKVYG-PAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEE-RGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDWKHVSAWWDDISNRPSWKKVLELCK 697
            +KV+G P   +  RV+  L EK+++FE +PVD+  G  +   +L L PFG++P ++DGD  L+ESRAI +Y AE+Y  +G +L+ +  ++ +     WL+VE   ++P   +L  + +F   FG   D   V+E + KL K LDVYE RL+KS++LAGD F+LADL H+P  HYL+G   +  +      VS W   IS RP+W KV++L K
Sbjct:   52 IKVHGVPMSTATMRVLATLYEKDLQFELIPVDMRAGAHKQEAHLALNPFGQIPALEDGDLTLFESRAITQYLAEEYSEKGEKLISQDCKKVKATTNVWLQVEGQQFDPNASKLAFERVFKGMFGMTTDPAAVQELEGKLQKVLDVYEARLAKSEFLAGDSFTLADLHHLPAIHYLLGTDSKV-LFDSRPKVSEWIKKISARPAWAKVIDLQK 262          
BLAST of CK939415 vs. ExPASy Swiss-Prot
Match: GSTF3_MAIZE (Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE=1 SV=4)

HSP 1 Score: 166.777 bits (421), Expect = 1.448e-40
Identity = 91/213 (42.72%), Postives = 126/213 (59.15%), Query Frame = 2
Query:   68 VKVYG-PAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDWKHVSAWWDDISNRPSWKKVLELCKTP 703
            +K+YG P   +  RV   L EK ++FE VPVDL  G  + P++L L PFG++P + DGD +L+ESRAI RY A KY S+GT+LL  T     L E WLEVE+H+++P    L  QLL     G   D  +V++  E+L K LDVYE  L+++KYLAGD F+LAD +H            R   +    HV AWW+ I+ RP+++K +     P
Sbjct:    4 LKLYGMPLSPNVVRVATVLNEKGLDFEIVPVDLTTGAHKQPDFLALNPFGQIPALVDGDEVLFESRAINRYIASKYASEGTDLLPATASAAKL-EVWLEVESHHFHPNASPLVFQLLVRPLLGGAPDAAVVEKHAEQLAKVLDVYEAHLARNKYLAGDEFTLADANHALLPALTSARPPRPGCVAARPHVKAWWEAIAARPAFQKTVAAIPLP 215          
The following BLAST results are available for this feature:
BLAST of CK939415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
GSTF3_ARATH1.481e-7764.25Glutathione S-transferase ERD13 OS=Arabidopsis tha... [more]
GSTF7_ARATH1.220e-5549.76Glutathione S-transferase OS=Arabidopsis thaliana ... [more]
GSTF1_ORYSJ7.419e-4546.15Probable glutathione S-transferase GSTF1 OS=Oryza ... [more]
GSTF_HYOMU6.280e-4441.90Glutathione S-transferase OS=Hyoscyamus muticus PE... [more]
GSTF_SILCU1.827e-4343.06Glutathione S-transferase OS=Silene cucubalus GN=G... [more]
GSTF2_TOBAC1.184e-4242.38Glutathione S-transferase APIC OS=Nicotiana tabacu... [more]
GSTF2_ORYSJ1.003e-4142.99Probable glutathione S-transferase GSTF2 OS=Oryza ... [more]
GSTF1_TOBAC1.003e-4142.38Glutathione S-transferase PARB OS=Nicotiana tabacu... [more]
GSTF6_ARATH1.310e-4141.04Glutathione S-transferase 6, chloroplastic OS=Arab... [more]
GSTF3_MAIZE1.448e-4042.72Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004750_H09 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IIF_H09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939415 ID=CK939415; Name=CK939415; organism=Citrus sinensis; type=EST; length=865bp
GGGGACGATCACAAGCTCACTTGCTGCTTTTTATCGACAGAAAAAGTTAA
CACCAGCAACGATGGTGGTCAAGGTGTACGGTCCGGCTTATGCTTCTCCC
AAACGAGTGATTTTGTGCTTGGTTGAGAAGGAAATCGAATTTGAAACTGT
CCCCGTTGATCTCATCAAAGGAGAGCAGAGAAGTCCTGAGTACCTCAAAT
TACAGCCTTTTGGAGAGCTTCCTGTCATTCAAGATGGAGATTTTATTTTA
TACGAGTCGCGAGCTATCATGAGGTACTACGCTGAAAAGTACAGGTCTCA
AGGAACCGAACTTCTGGGTAAAACAATTGAAGAAAGAGGCCTGGTGGAAC
AGTGGCTAGAAGTAGAGGCACACAACTACAACCCAGCAATTTACGAGCTG
ACCATCCAACTTTTATTTTCCTCCAAGTTTGGACGTCCCGTTGATGAAAA
ATTGGTGAAGGAGAGTGACGAAAAGCTTGGAAAAACGCTCGACGTTTACG
AGGAGAGGCTGTCGAAGAGCAAGTATTTGGCTGGTGATTTCTTCAGCCTG
GCTGATCTGAGTCACATTCCATTTACCCACTACTTGGTTGGGCCGATGGG
GAGACAGCATATGATTAGAGACTGGAAGCATGTGAGTGCCTGGTGGGATG
ATATTAGCAACAGGCCGTCCTGGAAGAAAGTCCTTGAGCTCTGTAAGACT
CCTTTCGGCTGAGCTTGATTGTATGTGTTTCAATTTTCGGGCTTGTGTTT
TACTTCTCTACTACTTGGTTTGTTTCTGTCTGTGGGATATGTTTCTTNNN
NNTGTGTGTTTCAAATAAATAAATGTTTGGAGTTGGAGCTTAAAAAAAAA
AAAAAAAAAAAAAAA
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