CK939399

Overview
NameCK939399
Unique NameCK939399
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length254
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1117 contig Csv1_Contig1117:59..312. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK939399 vs. ExPASy Swiss-Prot
Match: GSTF3_ARATH (Glutathione S-transferase ERD13 OS=Arabidopsis thaliana GN=ERD13 PE=1 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 1.698e-15
Identity = 35/61 (57.38%), Postives = 48/61 (78.69%), Query Frame = 2 
Query:   65 MVVKVYGPAYASPKLVILCLVDKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDF 247
            MV+ +Y P +AS K  ++ LV+K + FETV VDL+KGEQR PEYL +QPFG++PV+ DGD+
Sbjct:    1 MVLTIYAPLFASSKRAVVTLVEKGVSFETVNVDLMKGEQRQPEYLAIQPFGKIPVLVDGDY 61
[Close]
BLAST of CK939399 vs. ExPASy Swiss-Prot
Match: GSTF7_ARATH (Glutathione S-transferase OS=Arabidopsis thaliana GN=At3g03190 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.719e-12
Identity = 33/60 (55.00%), Postives = 46/60 (76.67%), Query Frame = 2 
Query:   65 MVVKVYGPAYAS-PKLVILCLVDKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDG 241
            MVVKVYG   A+ P+ V+LC ++K+IEFE + VDL K EQ+ P++L  QPFG++P I+DG
Sbjct:    1 MVVKVYGQIKAANPQRVLLCFLEKDIEFEVIHVDLDKLEQKKPQHLLRQPFGQVPAIEDG 60
The following BLAST results are available for this feature:
BLAST of CK939399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
GSTF3_ARATH1.698e-1557.38Glutathione S-transferase ERD13 OS=Arabidopsis tha... [more]
GSTF7_ARATH8.719e-1255.00Glutathione S-transferase OS=Arabidopsis thaliana ... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004751_B09 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IIIF_B09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939399 ID=CK939399; Name=CK939399; organism=Citrus sinensis; type=EST; length=254bp
GGGGATTACTATCACNNNCTCACTTGCTGCTTTTTATCGACANANAAAGT
TAACACCAGCAACGATGGTGGTCAAGGTGTACGGTCCGGCTTATGCTTCT
CCCAAACTAGTGATTTTGTGCTTGGTTGATAAGGAAATCGAATTTGAAAC
TGTCCCCGTTGATCTCATCAAAGGAGAGCAGAGAAGTCCTGAGTACCTCA
AATTACAGCCTTTTGGAGAGCTTCCTGTCATTCAAGATGGAGATTTTATT
TTAT
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