CK939394

Overview
NameCK939394
Unique NameCK939394
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK939394_ssr63 microsatellite CK939394_ssr63:63..72. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7012 contig Csv1_Contig7012:1..787. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK939394 vs. ExPASy Swiss-Prot
Match: KSG8_ARATH (Shaggy-related protein kinase theta OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=3)

HSP 1 Score: 194.512 bits (493), Expect = 4.835e-61
Identity = 93/117 (79.49%), Postives = 106/117 (90.60%), Query Frame = 2
Query:  458 KNVNHDDKDLEPSIVNGNGTEAGQVIATTVGGRNGQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELXXNLV 808
            +N N +DKD+E ++VNG+GTE GQVI TTVGGR+G+PKQTISYMA+RVVGTGSFGVVFQAKCLETG+ VAIKKVLQDKRYKNRELQIMRL +HPNVV L+H FFSTT+KDEL  NLV
Sbjct:   96 RNANREDKDMETTVVNGSGTETGQVITTTVGGRDGKPKQTISYMAQRVVGTGSFGVVFQAKCLETGEQVAIKKVLQDKRYKNRELQIMRLQDHPNVVRLRHSFFSTTDKDELYLNLV 212          

HSP 2 Score: 62.003 bits (149), Expect = 4.835e-61
Identity = 43/98 (43.88%), Postives = 56/98 (57.14%), Query Frame = 3
Query:  171 MNVMRRLKSIASGRTXXXXXXXXXXXXKRAKVDKELE-VNGEANLVERSASSLEQHMASTSLEPVASTSEAATVARTERSGFDQLPKEMNEMRIRDEK 461
            MNVMRRLKSIASGRT            KRAK+D+E + +  +   V++++S  E      S E VA TS    V  +E+   DQLP  M EM+IRDE+
Sbjct:    1 MNVMRRLKSIASGRTSISSDPGGDYALKRAKLDQENDNLCVDPMQVDQNSSCFEMKADVLSQESVAGTSNVPAV--SEKPVDDQLPDVMIEMKIRDER 96          
BLAST of CK939394 vs. ExPASy Swiss-Prot
Match: KSGT_BRANA (Shaggy-related protein kinase theta OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 1.154e-56
Identity = 94/116 (81.03%), Postives = 103/116 (88.79%), Query Frame = 2
Query:  461 NVNHDDKDLEPSIVNGNGTEAGQVIATTVGGRNGQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELXXNLV 808
            N   +DKD+EP IVNG GTE GQVI TTVGGR+G+PKQTISYMA+RVVGTGSFGVVFQAKCLETG+ VAIKKVLQDKRYKNRELQIMRL +HPNVV L+H FFSTT+KDEL  NLV
Sbjct:   93 NRGEEDKDMEPPIVNGCGTETGQVITTTVGGRDGKPKQTISYMAQRVVGTGSFGVVFQAKCLETGEQVAIKKVLQDKRYKNRELQIMRLQDHPNVVRLRHSFFSTTDKDELYLNLV 208          

HSP 2 Score: 50.447 bits (119), Expect = 1.154e-56
Identity = 37/101 (36.63%), Postives = 50/101 (49.50%), Query Frame = 3
Query:  171 MNVMRRLKSIASGRTXXXXXXXXXXXXKRAKVDKELEVNGEANLVERSASSLE----QHMASTSLEPVASTSEAATVARTERSGFDQLPKEMNEMRIRDEK 461
            MNVMRRLKSIASGRT            KR K+D++ +     NL  R    ++      M   S + VA TS             DQLP+ MN+MR+R+++
Sbjct:    1 MNVMRRLKSIASGRTSISSDPGVDSSLKRPKLDQDND-----NLSSRGDDPMQVDQSTDMVVVSQDTVAGTSNVPPPP-------DQLPEVMNDMRLREDE 89          
BLAST of CK939394 vs. ExPASy Swiss-Prot
Match: MSK1_TOBAC (Shaggy-related protein kinase NtK-1 OS=Nicotiana tabacum GN=NTK-1 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.526e-53
Identity = 91/112 (81.25%), Postives = 103/112 (91.96%), Query Frame = 2
Query:  473 DDKDLEPSIVNGNGTEAGQVIATTVGGRNGQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELXXNLV 808
            DDK++E +IV+GNGTE G +I TT+GGR+GQPKQTISYMAER+VG GSFGVVFQAKCLETG++VAIKKVLQDKRYKNRELQ MRLL+HPNVV LKHCFFSTTEKDE+  NLV
Sbjct:   36 DDKEIEAAIVDGNGTETGHIIVTTIGGRHGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVCLKHCFFSTTEKDEVYLNLV 147          

HSP 2 Score: 38.1206 bits (87), Expect = 2.526e-53
Identity = 20/48 (41.67%), Postives = 29/48 (60.42%), Query Frame = 3
Query:  336 MASTSLEPVASTSEAATVARTERSGFDQLPKEMNEMRIRDEKMLTMMI 479
            M S  L PV+   E+++       G D+LP+EMN+MRIRD+K +   I
Sbjct:    1 MTSVGLAPVSGLRESSS----HSVGVDRLPEEMNDMRIRDDKEIEAAI 44          
BLAST of CK939394 vs. ExPASy Swiss-Prot
Match: KSG1_ARATH (Shaggy-related protein kinase alpha OS=Arabidopsis thaliana GN=ASK1 PE=2 SV=3)

HSP 1 Score: 196.052 bits (497), Expect = 2.526e-53
Identity = 93/112 (83.04%), Postives = 104/112 (92.86%), Query Frame = 2
Query:  473 DDKDLEPSIVNGNGTEAGQVIATTVGGRNGQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELXXNLV 808
            DDK++E ++V+GNGTE G +I TT+GGRNGQPKQTISYMAERVVG GSFGVVFQAKCLETG++VAIKKVLQD+RYKNRELQ MRLL+HPNVVSLKHCFFSTTEKDEL  NLV
Sbjct:   32 DDKEMEATVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDRRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLV 143          

HSP 2 Score: 34.6538 bits (78), Expect = 2.526e-53
Identity = 15/34 (44.12%), Postives = 23/34 (67.65%), Query Frame = 3
Query:  360 VASTSEAATVARTERSGFDQLPKEMNEMRIRDEK 461
            +AS   A      + +G D+LP+EMN+M+IRD+K
Sbjct:    1 MASVGIAPNPGARDSTGVDKLPEEMNDMKIRDDK 34          
BLAST of CK939394 vs. ExPASy Swiss-Prot
Match: KSG3_ARATH (Shaggy-related protein kinase gamma OS=Arabidopsis thaliana GN=ASK3 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.665e-52
Identity = 94/112 (83.93%), Postives = 103/112 (91.96%), Query Frame = 2
Query:  473 DDKDLEPSIVNGNGTEAGQVIATTVGGRNGQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELXXNLV 808
            DDK++E +IVNGN TE G +I TT+GGRNGQPKQTISYMAERVVG GSFGVVFQAKCLETG++VAIKKVLQD+RYKNRELQ MRLL+HPNVVSLKHCFFSTTEKDEL  NLV
Sbjct:   36 DDKEMEATIVNGNVTETGHIIVTTIGGRNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDRRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLV 147          

HSP 2 Score: 31.5722 bits (70), Expect = 4.665e-52
Identity = 17/48 (35.42%), Postives = 28/48 (58.33%), Query Frame = 3
Query:  336 MASTSLEPVASTSEAATVARTERSGFDQLPKEMNEMRIRDEKMLTMMI 479
            MAS  +EP A+  E+        +  D+LP+EM +M+I+D+K +   I
Sbjct:    1 MASVGIEPSAAVRESTGNV----TDADRLPEEMKDMKIQDDKEMEATI 44          
BLAST of CK939394 vs. ExPASy Swiss-Prot
Match: MSK1_MEDSA (Glycogen synthase kinase-3 homolog MsK-1 OS=Medicago sativa GN=MSK-1 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 6.607e-51
Identity = 93/112 (83.04%), Postives = 104/112 (92.86%), Query Frame = 2
Query:  473 DDKDLEPSIVNGNGTEAGQVIATTVGGRNGQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELXXNLV 808
            DD+++E ++V+GNGTE G +I TT+GGRNGQPKQTISYMAERVVG GSFGVVFQAKCLETG++VAIKKVLQDKRYKNRELQ MRLL+HPNVVSLKHCFFSTTEKDEL  NLV
Sbjct:   38 DDREMEATVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLV 149          

HSP 2 Score: 26.5646 bits (57), Expect = 6.607e-51
Identity = 15/42 (35.71%), Postives = 24/42 (57.14%), Query Frame = 3
Query:  336 MASTSLEPVASTSEAATVARTERSGFDQLPKEMNEMRIRDEK 461
            MAS  + P +   E   +   E    D LP+EM++M+IRD++
Sbjct:    1 MASVGVAPTSGFREV--LGDGEIGVDDILPEEMSDMKIRDDR 40          
BLAST of CK939394 vs. ExPASy Swiss-Prot
Match: MSK3_MEDSA (Glycogen synthase kinase-3 homolog MsK-3 OS=Medicago sativa GN=MSK-3 PE=2 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 8.612e-51
Identity = 94/113 (83.19%), Postives = 104/113 (92.04%), Query Frame = 2
Query:  473 DDKDLEPS-IVNGNGTEAGQVIATTVGGRNGQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELXXNLV 808
            DDK++E + IV+GNGTE G +I TT+GG+NGQPKQTISYMAERVVG GSFGVVFQAKCLETG++VAIKKVLQDKRYKNRELQ MRLL+HPNVVSLKHCFFSTTEKDEL  NLV
Sbjct:   36 DDKEMEAATIVDGNGTETGHIIVTTIGGKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLV 148          

HSP 2 Score: 30.4166 bits (67), Expect = 8.612e-51
Identity = 11/18 (61.11%), Postives = 17/18 (94.44%), Query Frame = 3
Query:  408 GFDQLPKEMNEMRIRDEK 461
            G ++LP+EMN+M+IRD+K
Sbjct:   21 GVEKLPEEMNDMKIRDDK 38          
BLAST of CK939394 vs. ExPASy Swiss-Prot
Match: KSG5_ARATH (Shaggy-related protein kinase epsilon OS=Arabidopsis thaliana GN=ASK5 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.486e-50
Identity = 91/112 (81.25%), Postives = 104/112 (92.86%), Query Frame = 2
Query:  473 DDKDLEPSIVNGNGTEAGQVIATTVGGRNGQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELXXNLV 808
            DDK++E ++V+GNGTE G +I TT+GG+NGQPKQTISYMAER+VG GSFG+VFQAKCLETG++VAIKKVLQDKRYKNRELQ MRLL+HPNVVSLKHCFFSTTEKDEL  NLV
Sbjct:   37 DDKEMEAAVVDGNGTETGHIIVTTIGGKNGQPKQTISYMAERIVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLV 148          

HSP 2 Score: 25.0238 bits (53), Expect = 2.486e-50
Identity = 15/42 (35.71%), Postives = 23/42 (54.76%), Query Frame = 3
Query:  336 MASTSLEPVASTSEAATVARTERSGFDQLPKEMNEMRIRDEK 461
            MAS    P +S    AT         ++LP+ +NEM+I+D+K
Sbjct:    1 MASVGTLPASSM---ATKQSNASICAEKLPEGINEMKIKDDK 39          
BLAST of CK939394 vs. ExPASy Swiss-Prot
Match: MSK2_MEDSA (Glycogen synthase kinase-3 homolog MsK-2 OS=Medicago sativa GN=MSK-2 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.700e-49
Identity = 92/112 (82.14%), Postives = 102/112 (91.07%), Query Frame = 2
Query:  473 DDKDLEPSIVNGNGTEAGQVIATTVGGRNGQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELXXNLV 808
            DDK++E  +V+GN TEAG VI TT+GG+NGQPKQTISYMAER VG GSFGVVFQAKCLETG++VAIKKVLQDKRYKNRELQ MRLL+HPNVV+LKHCFFSTTEKDEL  NLV
Sbjct:   37 DDKEMEAHVVDGNSTEAGHVIVTTIGGKNGQPKQTISYMAERAVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVTLKHCFFSTTEKDELYLNLV 148          

HSP 2 Score: 24.6386 bits (52), Expect = 2.700e-49
Identity = 13/34 (38.24%), Postives = 18/34 (52.94%), Query Frame = 3
Query:  360 VASTSEAATVARTERSGFDQLPKEMNEMRIRDEK 461
            VA  S    V  +     D+LP E+  MRI+D+K
Sbjct:    6 VAPASGIVDVNASSAIAVDKLPDEILGMRIKDDK 39          
BLAST of CK939394 vs. ExPASy Swiss-Prot
Match: KSG6_ARATH (Shaggy-related protein kinase zeta OS=Arabidopsis thaliana GN=ASK6 PE=1 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 1.755e-45
Identity = 86/123 (69.92%), Postives = 107/123 (86.99%), Query Frame = 2
Query:  440 DENKR*KNVNHDDKDLEPSIVNGNGTEAGQVIATTVGGRNGQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELXXNLV 808
            D  KR  ++++D K++  +++ GN    G +I+TT+GG+NG+PKQTISYMAERVVGTGSFG+VFQAKCLETG+SVAIKKVLQD+RYKNRELQ+MRL++HPNVVSLKHCFFSTT +DEL  NLV
Sbjct:   25 DSLKRRPDIDND-KEMSAAVIEGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGESVAIKKVLQDRRYKNRELQLMRLMDHPNVVSLKHCFFSTTTRDELFLNLV 146          
The following BLAST results are available for this feature:
BLAST of CK939394 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
KSG8_ARATH4.835e-6179.49Shaggy-related protein kinase theta OS=Arabidopsis... [more]
KSGT_BRANA1.154e-5681.03Shaggy-related protein kinase theta OS=Brassica na... [more]
MSK1_TOBAC2.526e-5381.25Shaggy-related protein kinase NtK-1 OS=Nicotiana t... [more]
KSG1_ARATH2.526e-5383.04Shaggy-related protein kinase alpha OS=Arabidopsis... [more]
KSG3_ARATH4.665e-5283.93Shaggy-related protein kinase gamma OS=Arabidopsis... [more]
MSK1_MEDSA6.607e-5183.04Glycogen synthase kinase-3 homolog MsK-1 OS=Medica... [more]
MSK3_MEDSA8.612e-5183.19Glycogen synthase kinase-3 homolog MsK-3 OS=Medica... [more]
KSG5_ARATH2.486e-5081.25Shaggy-related protein kinase epsilon OS=Arabidops... [more]
MSK2_MEDSA2.700e-4982.14Glycogen synthase kinase-3 homolog MsK-2 OS=Medica... [more]
KSG6_ARATH1.755e-4569.92Shaggy-related protein kinase zeta OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004751_B03 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IIIF_B03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939394 ID=CK939394; Name=CK939394; organism=Citrus sinensis; type=EST; length=809bp
GGGGGTGTTTGTATTTTCTGTTTTTTAATTTCCTTTTGGGTCGCCGAGGA
AGAGAGAGAAATTCTCTCTCTCCTTTTGAAGCAATACCGTTCTTTTGAAT
TTGGCGTTGGATTTGTTCATTCTTTCATTTTTGAAGTGGAGAATCAATTA
GGGTTTCGTTTTCAGAAACAATGAATGTCATGCGCCGTCTCAAGAGCATT
GCTTCTGGTCGCACTTCTATTTCTTCTGATCCGGGTGGAGATTCTGGCAT
AAAGAGGGCAAAGGTCGATAAAGAATTAGAGGTAAATGGGGAAGCAAATT
TGGTTGAAAGAAGTGCCTCCAGTCTAGAGCAGCATATGGCTTCTACATCT
CTGGAGCCTGTTGCAAGCACGTCCGAAGCAGCCACAGTTGCTAGAACTGA
AAGATCAGGTTTTGATCAACTGCCTAAGGAAATGAATGAGATGAGAATAA
GAGATGAAAAAATGTTAACCATGATGATAAGGATTTGGAACCCTCAATTG
TCAATGGCAATGGAACAGAAGCAGGTCAAGTCATTGCTACTACAGTAGGT
GGTCGAAATGGACAACCAAAGCAGACAATCTCCTATATGGCAGAACGTGT
GGTGGGGACTGGTTCCTTTGGTGTTGTCTTCCAAGCTAAGTGCCTTGAAA
CAGGGGACTCTGTTGCAATAAAGAAGGTGCTCCAGGATAAGAGATACAAG
AATAGGGAACTCCAAATTATGCGTTTACTTAACCATCCTAATGTTGTTTC
TCTGAAACATTGTTTCTTTTCAACTACTGAGAAAGATGAGCTTTNNNTTA
ACCTTGTCT
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