CK939370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939370 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 8.256e-63 Identity = 133/259 (51.35%), Postives = 171/259 (66.02%), Query Frame = 3 Query: 126 TRKNNSSNTNDEXXXXXXXXXXXPVIRSSCSATLYPELCFXXXXXXXXXXXXKVNSPKDVIRLSLNLTITAVQHNYFATKKLITTRKSTLTKREKTSLHDCLEMVDETLDELYKTEHELQGYPAAANNKSIAEQADELKILVSAAMTNQETCLDGFSHERADKKIREELMEGQMHVFHMCSNALAMIKNMTDGDIGKDIVDHYSKARRLDDETK----WPEWLSAGDRRLLQXXXXXXXXXXXXXGSGNYLTVAAAVAA 890 +RKN+ N N+ +++SSCS+T YP+LCF KV S KDVI +SLN+T TAV+HNYF +KL+ +++ LTKREK +LHDCLE +DETLDEL+K +L+ YP N KS+++ AD+LK L+SAAMTNQ TCLDGFSH+ A+K +R+ L +GQ+HV MCSNALAMIKNMTD D+ ++ S R+L +ET WP WLS GDRRLLQ GSGN+ TVAAAVAA Sbjct: 53 SRKNSGDNGNEPHHA---------ILKSSCSSTRYPDLCFSAIAAVPEASK-KVTSQKDVIEMSLNITTTAVEHNYFGIQKLL--KRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYP---NKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDM---MIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSSVTPNAVVAADGSGNFKTVAAAVAA 293
BLAST of CK939370 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 2.402e-62 Identity = 132/259 (50.97%), Postives = 171/259 (66.02%), Query Frame = 3 Query: 126 TRKNNSSNTNDEXXXXXXXXXXXPVIRSSCSATLYPELCFXXXXXXXXXXXXKVNSPKDVIRLSLNLTITAVQHNYFATKKLITTRKSTLTKREKTSLHDCLEMVDETLDELYKTEHELQGYPAAANNKSIAEQADELKILVSAAMTNQETCLDGFSHERADKKIREELMEGQMHVFHMCSNALAMIKNMTDGDIGKDIVDHYSKARRLDDETK----WPEWLSAGDRRLLQXXXXXXXXXXXXXGSGNYLTVAAAVAA 890 +RKN+ N N+ +++SSCS+T YP+LCF KV S KDVI +SLN+T TAV+HNYF +KL+ +++ LTKREK +LHDCLE +DETLDEL+K +L+ YP N KS+++ AD+LK L+SAAMTNQ TCLDGFSH+ A+K +R+ L +GQ+HV MCSNALAMIKNMTD D+ ++ S R+L +ET WP WLS GDRRLLQ GSGN+ TVAA+VAA Sbjct: 53 SRKNSGDNGNEPHHA---------ILKSSCSSTRYPDLCFSAIAAVPEASK-KVTSQKDVIEMSLNITTTAVEHNYFGIQKLL--KRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYP---NKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDM---MIMRTSNNRKLIEETSTVDGWPAWLSTGDRRLLQSSSVTPNVVVAADGSGNFKTVAASVAA 293
BLAST of CK939370 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 4.530e-61 Identity = 128/253 (50.59%), Postives = 168/253 (66.40%), Query Frame = 3 Query: 132 KNNSSNTNDEXXXXXXXXXXXPVIRSSCSATLYPELCFXXXXXXXXXXXXKVNSPKDVIRLSLNLTITAVQHNYFATKKLITTRKSTLTKREKTSLHDCLEMVDETLDELYKTEHELQGYPAAANNKSIAEQADELKILVSAAMTNQETCLDGFSHERADKKIREELMEGQMHVFHMCSNALAMIKNMTDGDIGKDI-VDHYSKARRL-DDETKWPEWLSAGDRRLLQXXXXXXXXXXXXXGSGNYLTVAAAV 884 K++S N++D +++S+CS TL+PELC+ KV S KDVI LSLN+T+ AV+ NY+A K+LI TRK LT REK +LHDCLE +DETLDEL+ +L+ YP N KS+ E ++LK L+S+A+TNQETCLDGFSH+ ADKK+R+ L++GQ HV MCSNALAMI NMTD DI ++ + + R+L +D +WPEWLSAGDRRLLQ GSG+Y TV+ AV Sbjct: 43 KSHSKNSDDHADIMAISSSAHAIVKSACSNTLHPELCYSAIVNVSDFSK-KVTSQKDVIELSLNITVKAVRRNYYAVKELIKTRKG-LTPREKVALHDCLETMDETLDELHTAVEDLELYP---NKKSLKEHVEDLKTLISSAITNQETCLDGFSHDEADKKVRKVLLKGQKHVEKMCSNALAMICNMTDTDIANEMKLSAPANNRKLVEDNGEWPEWLSAGDRRLLQSSTVTPDVVVAADGSGDYKTVSEAV 290
BLAST of CK939370 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2) HSP 1 Score: 233.032 bits (593), Expect = 1.722e-60 Identity = 132/251 (52.59%), Postives = 160/251 (63.75%), Query Frame = 3 Query: 198 VIRSSCSATLYPELCFXXXXXXXXXXXXKVNSPKDVIRLSLNLTITAVQHNYFATKKLITTRKSTLTKREKTSLHDCLEMVDETLDELYKTEHELQGYPAAANNKSIAEQADELKILVSAAMTNQETCLDGFSHERADKKIREELMEGQMHVFHMCSNALAMIKNMTDGDIGK-----DIVDHYSKARRLDDETK---------------WPEWLSAGDRRLLQXXXXXXXXXXXXXGSGNYLTVAAAVAA 890 V+RSSCS+T YPELC ++ S KDVI S+NLTITAV+HNYF KKLI RK LT REKT+LHDCLE +DETLDEL++T +L YP K++ E A +LK L+S+A+TNQETCLDGFSH+ ADK++R+ L++GQ+HV HMCSNALAMIKNMTD DI I + K + + ET WP WLSAGDRRLLQ GSG + TVAAAVAA Sbjct: 58 VLRSSCSSTRYPELCISAVVTAGGV---ELTSQKDVIEASVNLTITAVEHNYFTVKKLIKKRKG-LTPREKTALHDCLETIDETLDELHETVEDLHLYPT---KKTLREHAGDLKTLISSAITNQETCLDGFSHDDADKQVRKALLKGQIHVEHMCSNALAMIKNMTDTDIANFEQKAKITSNNRKLKEENQETTVAVDIAGAGELDSEGWPTWLSAGDRRLLQGSGVKADATVAADGSGTFKTVAAAVAA 301
BLAST of CK939370 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2) HSP 1 Score: 222.631 bits (566), Expect = 2.327e-57 Identity = 125/243 (51.44%), Postives = 157/243 (64.61%), Query Frame = 3 Query: 198 VIRSSCSATLYPELCFXXXXXXXXXXXXKVNSPKDVIRLSLNLTITAVQHNYFATKKLITTRKSTLTKREKTSLHDCLEMVDETLDELYKTEHELQGYPAAANNKSIAEQADELKILVSAAMTNQETCLDGFSHERADKKIREELMEGQMHVFHMCSNALAMIKNMTDGDIG------KDIVDHYSKARRLD------DETKWPEWLSAGDRRLLQXXXXXXXXXXXXXGSGNYLTVAAAVAA 890 +++S CS+TLYPELCF ++ S K+VI SLNLT AV+HNYFA KKLI RK LT RE T+LHDCLE +DETLDEL+ +L YP KS+ + AD+LK L+S+A+TNQ TCLDGFS++ AD+K+R+ L++GQ+HV HMCSNALAMIKNMT+ DI K + R+L D WP+WLS GDRRLLQ GSG++ TVAAAVAA Sbjct: 61 ILKSVCSSTLYPELCFSAVAATGGK---ELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKG-LTPREVTALHDCLETIDETLDELHVAVEDLHQYP---KQKSLRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAMIKNMTETDIANFELRDKSSTFTNNNNRKLKEVTGDLDSDGWPKWLSVGDRRLLQGSTIKADATVADDGSGDFTTVAAAVAA 296
BLAST of CK939370 vs. ExPASy Swiss-Prot
Match: 21KD_DAUCA (21 kDa protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.428e-14 Identity = 48/164 (29.27%), Postives = 88/164 (53.66%), Query Frame = 3 Query: 201 IRSSCSATLYPELCFXXXXXXXXXXXXKVNSPKDVIRLSLNLTITAVQHNYFATKKLITTRKSTLTKREKTSLHDCLEMVDETLDELYKTEHELQGYPAAANNKSIAEQADELKILVSAAMTNQETCLDGFSHERADKKIREELMEGQMHVFHMCSNALAMIKN 692 I++SC+ T YP +C N+P+++ +L +++T Q K+L + L R+ ++HDCLE V+++LD + ++ E++ A N + ++ VSAA+T++ TC+DGF+ + D KI+E + + V + SNALA++ N Sbjct: 29 IKTSCTLTTYPAVCEQSLSAYAKTIQ---NNPQELASTALQVSLTRTQQAQTFMKRL--NKFKGLKARQYAAIHDCLEEVEDSLDRVSRSCDEMKNLSHAKGN-DFTFRMSNVETWVSAALTDETTCMDGFAGKGMDGKIKESVRAQVVAVARVTSNALALVNN 186
BLAST of CK939370 vs. ExPASy Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.181e-14 Identity = 58/209 (27.75%), Postives = 99/209 (47.37%), Query Frame = 3 Query: 300 DVIRLSLNLTITAVQHNYFATKKLITTRKSTLTKREKTSLHDCLEMVDETLDELYKTEHELQGYPAAANNKSIAEQADELKILVSAAMTNQETCLDGFSHERADKK----------IREELMEGQMHVFHMCSNALAMIKNMTDGDIGKDIVDHYSKARRLDDETKWPEWLSAGDRRLLQ--XXXXXXXXXXXXXGSGNYLTVAAAVAA 890 +++ +LN TI+ V + L+ S L+ R+ + DCLE++D+T+ +L +L+ + +N +K+L+SAAMTN TCLDGF+ D+ + E L E ++ S++LAM++N+ GK + ++ +P W+S DR LLQ G+GNY T+ A++A Sbjct: 39 ELVVTALNQTISNVNLSSSNFSDLLQRLGSNLSHRDLCAFDDCLELLDDTVFDLTTAISKLRSHSPELHN---------VKMLLSAAMTNTRTCLDGFASSDNDENLNNNDNKTYGVAESLKESLFNISSHVSDSLAMLENIPGHIPGK-----------VKEDVGFPMWVSGSDRNLLQDPVDETKVNLVVAQNGTGNYTTIGEAISA 227
BLAST of CK939370 vs. ExPASy Swiss-Prot
Match: PME45_ARATH (Putative pectinesterase/pectinesterase inhibitor 45 OS=Arabidopsis thaliana GN=PME45 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.132e-11 Identity = 68/241 (28.22%), Postives = 112/241 (46.47%), Query Frame = 3 Query: 198 VIRSSCSATLYPELCFXXXXXXXXXXXXKVNSPKDVIRLSLNLTITAVQHNYFATKKLITTRKSTLTKREKTSLHDCLEMVDETLDELYKTEHELQGYPAAANNKSIAEQADELKILVSAAMTNQETCLDGFSHERADKKIREELMEGQMHVFHMCSNALAMIKNMTDGDIG-------KDIVDHYSKARRLDDETKWPEWLSAGDRRLLQ---XXXXXXXXXXXXXGSGNYLTVAAAVAA 890 +I++ C++TLY C K ++P+ R L I AV + K + + K T K +K ++ C +VDE +EL + + + NN A+ +L +SA M+ QETC+DGF + +IR+ Q+ + SN+LAMIK++ DG + + +++ S A+ D T WLS +RR+L+ GSGN+ T+ AA+ A Sbjct: 94 IIQTLCNSTLYKPTC-----QNTLKNETKKDTPQTDPRSLLKSAIVAVNDDLDQVFKRVLSLK-TENKDDKDAIAQCKLLVDEAKEELGTSMKRIND--SEVNN--FAKIVPDLDSWLSAVMSYQETCVDGFEEGKLKTEIRKNFNSSQV----LTSNSLAMIKSL-DGYLSSVPKVKTRLLLEARSSAKETDHIT---SWLSNKERRMLKAVDVKALKPNATVAKDGSGNFTTINAALKA 316
BLAST of CK939370 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.292e-11 Identity = 50/207 (24.15%), Postives = 98/207 (47.34%), Query Frame = 3 Query: 201 IRSSCSATLYPELCFXXXXXXXXXXXXKVNSPKDVIRLSLNLTITAVQHNYFATKKLITTRKSTLTKREKTSLHDCLEMVDETLDELYKTEHELQGYPAAANNKSIAEQADELKILVSAAMTNQETCLDGFSHERADKKIREELMEGQMHVFHMCSNALAMIKNMTDGDIGKDIVDHYSKARRL----DDETKWPEWLSAGDRRLLQ 809 I +C T +PELC +S KD+I +++N+T+ H +++ L + R +++ C+E++D+++D L + A ++ S + + ++ +SAA+TN +TC +GF D +++ + ++ + SN LA+ DGD D + RRL + E K+P W+ +R +L+ Sbjct: 87 ISKACELTRFPELCVDSLMDFPGSLA--ASSSKDLIHVTVNMTLHHFSHALYSSASLSFV---DMPPRARSAYDSCVELLDDSVDALSR---------ALSSVVSSSAKPQDVTTWLSAALTNHDTCTEGFDGV-DDGGVKDHMTAALQNLSELVSNCLAIFSASHDGD---DFAGVPIQNRRLLGVEEREEKFPRWMRPKEREILE 275
BLAST of CK939370 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11 Identity = 55/231 (23.81%), Postives = 102/231 (44.16%), Query Frame = 3 Query: 201 IRSSCSATLYPELCFXXXXXXXXXXXXKVNSPKDVIRLSLNLTITAVQHNYFATKKLITTRKSTLTKREKTSLHDCLEMVDETLDELYKTEHELQGYPAAANNKSIAEQADELKILVSAAMTNQETCLDGFSH-ERADKKIREELMEGQMHVFHMCSNALAMIKNMTDGDIGKDIVDHYSKARRLDDETKWPEWLSAGDRRLL--QXXXXXXXXXXXXXGSGNYLTVAAAV 884 I +CS +LYP LC N ++I +S N T+ + + + T+ + R +++ CLE++D+++D L + L + ++S ++ + +S+AMTN +TC DGF E +++++++ + M SN LA+ G +V++ K ++ + P WL DR LL GSG + T+A A+ Sbjct: 75 ISRTCSKSLYPNLCIDTLLDFPGSLTADEN---ELIHISFNATLQKFSKALYTSSTITYTQ---MPPRVRSAYDSCLELLDDSVDALTRA---LSSVVVVSGDESHSD----VMTWLSSAMTNHDTCTDGFDEIEGQGGEVKDQVIGAVKDLSEMVSNCLAIFAGKVKDLSGVPVVNN-RKLLGTEETEELPNWLKREDRELLGTPTSAIQADITVSKDGSGTFKTIAEAI 291 The following BLAST results are available for this feature:
BLAST of CK939370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK939370 ID=CK939370; Name=CK939370; organism=Citrus sinensis; type=EST; length=890bpback to top |