CX675663
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675663 vs. ExPASy Swiss-Prot
Match: RL37A_GOSHI (60S ribosomal protein L37a OS=Gossypium hirsutum GN=RPL37A PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 7.163e-40 Identity = 78/80 (97.50%), Postives = 79/80 (98.75%), Query Frame = 2 Query: 2 KYGTRYGASLRKQIKKMEVSQHSRYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 241 KYGTRYGASLRKQIKKMEVSQHS+YFCEFCGKYAVKRKAVGIWGCK CGKVKAGGAYTLNTASAVTVRSTIRRLREQTES Sbjct: 13 KYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKACGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 92
BLAST of CX675663 vs. ExPASy Swiss-Prot
Match: RL37A_ORYSJ (60S ribosomal protein L37a OS=Oryza sativa subsp. japonica GN=Os01g0679700 PE=1 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 9.356e-40 Identity = 76/80 (95.00%), Postives = 80/80 (100.00%), Query Frame = 2 Query: 2 KYGTRYGASLRKQIKKMEVSQHSRYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 241 KYGTRYGASLRKQIKKMEVSQHS+YFCEFCGK+AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+ Sbjct: 13 KYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTEA 92
BLAST of CX675663 vs. ExPASy Swiss-Prot
Match: R37A1_ARATH (Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana GN=RPL37AB PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 2.084e-39 Identity = 75/80 (93.75%), Postives = 79/80 (98.75%), Query Frame = 2 Query: 2 KYGTRYGASLRKQIKKMEVSQHSRYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 241 KYGTRYGASLRKQIKKMEVSQH++YFCEFCGKY+VKRK VGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTES Sbjct: 13 KYGTRYGASLRKQIKKMEVSQHNKYFCEFCGKYSVKRKVVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTES 92
BLAST of CX675663 vs. ExPASy Swiss-Prot
Match: RL37A_PSEMZ (60S ribosomal protein L37a OS=Pseudotsuga menziesii GN=RPL37A PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 7.920e-39 Identity = 75/79 (94.94%), Postives = 78/79 (98.73%), Query Frame = 2 Query: 2 KYGTRYGASLRKQIKKMEVSQHSRYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 238 KYGTRYGASLRKQIKKMEVSQHS++FCEFCGK+AVKRKAVGIWGCKDCGKVKAGGAYTLNT SAVTVRSTIRRLREQTE Sbjct: 13 KYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTPSAVTVRSTIRRLREQTE 91
BLAST of CX675663 vs. ExPASy Swiss-Prot
Match: R37A2_ARATH (60S ribosomal protein L37a-2 OS=Arabidopsis thaliana GN=RPL37AC PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.034e-38 Identity = 74/79 (93.67%), Postives = 77/79 (97.47%), Query Frame = 2 Query: 2 KYGTRYGASLRKQIKKMEVSQHSRYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 238 KYGTRYGAS+RKQIKKMEVSQHS+YFCEFCGKY VKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQ E Sbjct: 13 KYGTRYGASIRKQIKKMEVSQHSKYFCEFCGKYGVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQIE 91
BLAST of CX675663 vs. ExPASy Swiss-Prot
Match: RL37A_BRARA (60S ribosomal protein L37a OS=Brassica rapa GN=RPL37A PE=3 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 2.548e-37 Identity = 74/80 (92.50%), Postives = 77/80 (96.25%), Query Frame = 2 Query: 2 KYGTRYGASLRKQIKKMEVSQHSRYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRS-TIRRLREQTE 238 KYGTRYGAS+RKQIKKMEVSQHS+YFCEFCGKY VKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRS TIRRLREQ E Sbjct: 13 KYGTRYGASIRKQIKKMEVSQHSKYFCEFCGKYGVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSHTIRRLREQIE 92
BLAST of CX675663 vs. ExPASy Swiss-Prot
Match: RL37A_OSTLU (60S ribosomal protein L37a OS=Ostreococcus lucimarinus (strain CCE9901) GN=RPL37a PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 4.209e-32 Identity = 62/79 (78.48%), Postives = 69/79 (87.34%), Query Frame = 2 Query: 2 KYGTRYGASLRKQIKKMEVSQHSRYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 238 KYGTRYGASLRK +KK EVSQHS++FC+FCGKY +KRKAVGIW CK C K KAGGAY+LNT +VTVRSTIRRLRE TE Sbjct: 13 KYGTRYGASLRKVVKKQEVSQHSKFFCDFCGKYGMKRKAVGIWSCKGCNKTKAGGAYSLNTGGSVTVRSTIRRLREATE 91
BLAST of CX675663 vs. ExPASy Swiss-Prot
Match: RL37A_OSTTA (60S ribosomal protein L37a OS=Ostreococcus tauri GN=RPL37a PE=3 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 3.563e-31 Identity = 61/79 (77.22%), Postives = 69/79 (87.34%), Query Frame = 2 Query: 2 KYGTRYGASLRKQIKKMEVSQHSRYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 238 KYGTRYGASLRK +KK EVSQHS++FC+FCGKY +KR+AVGIW CK C K KAGGAY+LNT +VTVRSTIRRLRE TE Sbjct: 13 KYGTRYGASLRKVVKKTEVSQHSKFFCDFCGKYGMKRQAVGIWCCKGCNKTKAGGAYSLNTGGSVTVRSTIRRLREATE 91
BLAST of CX675663 vs. ExPASy Swiss-Prot
Match: RL37A_CRYST (60S ribosomal protein L37a OS=Cryptochiton stelleri GN=RPL37A PE=3 SV=3) HSP 1 Score: 125.561 bits (314), Expect = 1.267e-28 Identity = 57/80 (71.25%), Postives = 68/80 (85.00%), Query Frame = 2 Query: 2 KYGTRYGASLRKQIKKMEVSQHSRYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 241 KYGTRYGASLRK +KKME++QHS+Y C+FCGK A+KR+AVGIWGCK C KV AGGA+ +T +AVTVRS +RRLRE ES Sbjct: 13 KYGTRYGASLRKTVKKMEITQHSKYTCQFCGKDAMKRQAVGIWGCKSCRKVVAGGAWVYSTMAAVTVRSAVRRLREMKES 92
BLAST of CX675663 vs. ExPASy Swiss-Prot
Match: RL43_ASHGO (60S ribosomal protein L43 OS=Ashbya gossypii GN=RPL43 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 4.077e-27 Identity = 55/80 (68.75%), Postives = 63/80 (78.75%), Query Frame = 2 Query: 2 KYGTRYGASLRKQIKKMEVSQHSRYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 241 KYG RYG+SLR+Q+KK+EV QH+RY C FCGK AVKR A GIW C C K AGGAYT +TA+A TVRSTIRRLRE E+ Sbjct: 13 KYGVRYGSSLRRQVKKLEVQQHARYDCSFCGKKAVKRGAAGIWNCSSCKKTVAGGAYTFSTAAAATVRSTIRRLREMAEA 92 The following BLAST results are available for this feature:
BLAST of CX675663 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675663 ID=CX675663; Name=CX675663; organism=Citrus sinensis; type=EST; length=498bpback to top |