CX675660

Overview
NameCX675660
Unique NameCX675660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675660 vs. ExPASy Swiss-Prot
Match: MCFW_DICDI (Mitochondrial substrate carrier family protein W OS=Dictyostelium discoideum GN=mcfW PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.543e-18
Identity = 43/87 (49.43%), Postives = 60/87 (68.97%), Query Frame = -2
Query:  362 IMIASSIAKVLASVITYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPGFYRGCATNLLRTTPSAVITFTSYEIIQSFL 622
            IMIASS++K++ASV+ YPHEV+R+R Q+   +         ++   K++ ++EG+ G YRG   NLLR TPS VITFTSYE I+ FL
Sbjct:  236 IMIASSVSKIIASVVAYPHEVLRARSQDSSPDSPNRTYRGNIIQMFKQIVREEGWRGLYRGMGVNLLRVTPSCVITFTSYEYIKKFL 322          
BLAST of CX675660 vs. ExPASy Swiss-Prot
Match: MFTC_MOUSE (Mitochondrial folate transporter/carrier OS=Mus musculus GN=Slc25a32 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.437e-15
Identity = 43/109 (39.45%), Postives = 65/109 (59.63%), Query Frame = -2
Query:  362 ILKLSDDTDVDKLNPGSIMIA-----SSIAKVLASVITYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPGFYRGCATNLLRTTPSAVITFTSYEIIQSFL 673
            +LKL  +  +++L    +  A     ++++K+ A   TYP++VVR+RLQ+Q       V Y GV D + K ++KEG  GFY+G A NL+R TP+  ITF  YE +  FL
Sbjct:  205 LLKLKYNKHINRLPEAQLSTAEYISVAALSKIFAVAATYPYQVVRARLQDQ------HVSYGGVTDVITKTWRKEGIGGFYKGIAPNLIRVTPACCITFVVYENVSHFL 307          
BLAST of CX675660 vs. ExPASy Swiss-Prot
Match: MFTC_MACFA (Mitochondrial folate transporter/carrier OS=Macaca fascicularis GN=SLC25A32 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.489e-15
Identity = 42/110 (38.18%), Postives = 68/110 (61.82%), Query Frame = -2
Query:  359 ILKLSDDTDVDKLNPGSI-----MIASSIAKVLASVITYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPGFYRGCATNLLRTTPSAVITFTSYEIIQSFLL 673
            +LKL  +  +++L    +     +  ++++K+ A   TYP++VVR+RLQ+Q       + Y+GV+D + K ++KEG  GFY+G A NL+R TP+  ITF  YE +  FLL
Sbjct:  205 LLKLKYNQHINRLPEAQLSTVEYISVAALSKIFAVAATYPYQVVRARLQDQ------HMFYSGVIDVITKTWRKEGIGGFYKGIAPNLIRVTPACCITFVVYENVSHFLL 308          
BLAST of CX675660 vs. ExPASy Swiss-Prot
Match: MFTC_HUMAN (Mitochondrial folate transporter/carrier OS=Homo sapiens GN=SLC25A32 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.863e-15
Identity = 42/110 (38.18%), Postives = 68/110 (61.82%), Query Frame = -2
Query:  359 ILKLSDDTDVDKLNPGSI-----MIASSIAKVLASVITYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPGFYRGCATNLLRTTPSAVITFTSYEIIQSFLL 673
            +LKL  +  +++L    +     +  ++++K+ A   TYP++VVR+RLQ+Q       + Y+GV+D + K ++KEG  GFY+G A NL+R TP+  ITF  YE +  FLL
Sbjct:  205 LLKLKYNQHINRLPEAQLSTVEYISVAALSKIFAVAATYPYQVVRARLQDQ------HMFYSGVIDVITKTWRKEGVGGFYKGIAPNLIRVTPACCITFVVYENVSHFLL 308          
BLAST of CX675660 vs. ExPASy Swiss-Prot
Match: YEA6_YEAST (Probable mitochondrial carrier YEL006W OS=Saccharomyces cerevisiae GN=YEL006W PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.306e-14
Identity = 38/97 (39.18%), Postives = 65/97 (67.01%), Query Frame = -2
Query:  362 TDVDKLNPGSIMIASSIAKVLASVITYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPGFYRGCATNLLRTTPSAVITFTSYEIIQSFL 652
            TDV   N   +++AS ++K++AS +TYPHE++R+R+Q +        ++  ++  +K  +++EGF GFY G ATNL+RT P+AV+T  S+E  + +L
Sbjct:  236 TDVTSSNFQKLILASMLSKMVASTVTYPHEILRTRMQLKSDLPNTVQRH--LLPLIKITYRQEGFAGFYSGFATNLVRTVPAAVVTLVSFEYSKKYL 330          
BLAST of CX675660 vs. ExPASy Swiss-Prot
Match: MCFM_DICDI (Mitochondrial substrate carrier family protein M OS=Dictyostelium discoideum GN=mcfM PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.361e-13
Identity = 41/94 (43.62%), Postives = 55/94 (58.51%), Query Frame = -2
Query:  371 VDKLNPGSIMIASSIAKVLASVITYPHEVVRSRLQEQGQ--NRKVDVQYAGVVDCVKKVFQKEGFPGFYRGCATNLLRTTPSAVITFTSYEIIQ 646
            +D LN   I IASSI+K LAS I YP +VV++RLQ++    N+     Y G  D + K+ + EG  GFYRG   N L+  P+  IT   YE I+
Sbjct:  204 LDSLNASEIFIASSISKFLASTILYPFQVVKTRLQDERNIPNQNNVRVYNGTKDVIFKILKNEGIIGFYRGLVPNTLKVIPNTSITLLLYEEIK 297          
BLAST of CX675660 vs. ExPASy Swiss-Prot
Match: YKQ9_SCHPO (Uncharacterized mitochondrial carrier C688.09 OS=Schizosaccharomyces pombe GN=SPAC688.09 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.223e-12
Identity = 41/99 (41.41%), Postives = 60/99 (60.61%), Query Frame = -2
Query:  362 DTDVDK-LNPGSIMIASSIAKVLASVITYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPGFYRGCATNLLRTTPSAVITFTSYEIIQSFL 655
            +T  DK L+ G  +  + IAK +A+ I YPHEVVR+RL+ Q  +     +Y G++ C K V+ ++G  G Y G   +LLR  P+A I F SYE+I  F+
Sbjct:  263 ETIYDKVLDWGGKLGGAGIAKFMAAGIAYPHEVVRTRLR-QSPSINGTPKYTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVVPNACILFGSYEVIMHFI 360          
BLAST of CX675660 vs. ExPASy Swiss-Prot
Match: YIA6_YEAST (Uncharacterized mitochondrial carrier YIL006W OS=Saccharomyces cerevisiae GN=YIL006W PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.557e-12
Identity = 35/100 (35.00%), Postives = 62/100 (62.00%), Query Frame = -2
Query:  362 SDDTDVDKLNPGSIMIASSIAKVLASVITYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPGFYRGCATNLLRTTPSAVITFTSYEIIQSFL 661
            S + + + +N   +++ASS++K++AS +TYPHE++R+R+Q +      D     +   +K  + +EG  GFY G  TNL+RT P++ IT  S+E  ++ L
Sbjct:  268 SRENNTNSINLQRLIMASSVSKMIASAVTYPHEILRTRMQLKSD--IPDSIQRRLFPLIKATYAQEGLKGFYSGFTTNLVRTIPASAITLVSFEYFRNRL 365          
BLAST of CX675660 vs. ExPASy Swiss-Prot
Match: S2540_DICDI (Mitochondrial substrate carrier family protein H OS=Dictyostelium discoideum GN=mcfH PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.035e-11
Identity = 37/102 (36.27%), Postives = 64/102 (62.75%), Query Frame = -2
Query:  362 SDDTDVDKLNPGSIMIASSIAKVLASVITYPHEVVRSRLQEQGQNRKVDVQYA--GVVDCVKKVFQKEGFPGFYRGCATNLLRTTPSAVITFTSYEIIQSFL 661
            ++D+++ K N   +M+AS    +++S+I  P +VV++RLQ Q     ++ ++   G +D  KK+++ EG   F+RG   +LL T PSA I FTSYE ++ +L
Sbjct:   22 NNDSNIHK-NVKKLMVASIFGGIMSSLIVTPLDVVKTRLQTQNTGSHINQKHVFKGTLDAFKKIYKNEGPLTFWRGVTPSLLMTIPSATIYFTSYEYLKEYL 122          
BLAST of CX675660 vs. ExPASy Swiss-Prot
Match: S2533_BOVIN (Solute carrier family 25 member 33 OS=Bos taurus GN=SLC25A33 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.035e-11
Identity = 34/96 (35.42%), Postives = 58/96 (60.42%), Query Frame = -2
Query:  374 SDDTDVDKLNPGSIMIASSIAKVLASVITYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPGFYRGCATNLLRTTPSAVITFTSYEII 661
            ++ T+ +  N   +M A++++K  AS + YPHEV+R+RL+E+G       +Y   V   + VF++EG+  FYRG    L+R  P+  I  ++YE+I
Sbjct:  223 TNGTEKNSTNFFGLMAAAALSKGCASCVAYPHEVIRTRLREEGS------KYKSFVQTARLVFREEGYLAFYRGLFAQLIRQIPNTAIVLSTYELI 312          
The following BLAST results are available for this feature:
BLAST of CX675660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
MCFW_DICDI2.543e-1849.43Mitochondrial substrate carrier family protein W O... [more]
MFTC_MOUSE3.437e-1539.45Mitochondrial folate transporter/carrier OS=Mus mu... [more]
MFTC_MACFA4.489e-1538.18Mitochondrial folate transporter/carrier OS=Macaca... [more]
MFTC_HUMAN5.863e-1538.18Mitochondrial folate transporter/carrier OS=Homo s... [more]
YEA6_YEAST1.306e-1439.18Probable mitochondrial carrier YEL006W OS=Saccharo... [more]
MCFM_DICDI9.361e-1343.62Mitochondrial substrate carrier family protein M O... [more]
YKQ9_SCHPO1.223e-1241.41Uncharacterized mitochondrial carrier C688.09 OS=S... [more]
YIA6_YEAST3.557e-1235.00Uncharacterized mitochondrial carrier YIL006W OS=S... [more]
S2540_DICDI1.035e-1136.27Mitochondrial substrate carrier family protein H O... [more]
S2533_BOVIN1.035e-1135.42Solute carrier family 25 member 33 OS=Bos taurus G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_63G12_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-63G12-M23-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675660 ID=CX675660; Name=CX675660; organism=Citrus sinensis; type=EST; length=719bp
TTTTTTTTTTTTTTTTTGATAATGGAAAAAAATATCGAACAAAGGGAATT
AAAAAGAACAATTAATTTTATTAAACTTACAGCAAAATTCAATTTTATGG
AAAATTTCCCCAACAGGGAAGATGGAAAATTTCCCCAACAGGGAAGTTGG
AAAAGAAAAAAGCCGGTCAGTGTCTCGCGGTTAGCTGATCCTTACTTCCG
AGAGGAATTGAGGGAGTCAGTTTGTTTGATTGGATTTGTGATTGCCGCAA
AGTATCGTTTTCTTCAGCCCCAGCTTCATCGATTTTCTGCTGAGGCTTGA
CATGCTCACCAAATTTAGGCTGGATTTGTGAATGATTCTTGTCCGGAGGT
AGAACTCGCAGCAAGAAGCTCTGTATTATCTCATAACTGGTAAACGTAAT
TACAGCAGATGGAGTTGTTCTCAATAGATTTGTCGCACAGCCACGGTAAA
AGCCAGGGAAACCTTCCTTTTGGAATACCTTCTTGACACAATCAACAACG
CCTGCATATTGTACATCAACCTTTCTGTTCTGCCCTTGCTCTTGAAGCCT
TGAACGTACAACCTCATGTGGGTAAGTAATTACAGAGGCAAGTACTTTTG
CTATTGAAGAAGCAATCATAATACTTCCAGGATTTAGCTTATCAACATCT
GTGTCATCTGATAACTTCAAAATTAACATGATTAGCAAAGAATAAATGTT
ACATATCATCTATTTAATT
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