CX675659

Overview
NameCX675659
Unique NameCX675659
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5893 contig Csv1_Contig5893:50..892. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX675659 vs. ExPASy Swiss-Prot
Match: MFTC_MOUSE (Mitochondrial folate transporter/carrier OS=Mus musculus GN=Slc25a32 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.092e-18
Identity = 43/109 (39.45%), Postives = 65/109 (59.63%), Query Frame = 1
Query:  280 ILKLSDDTDVDKLNPGSIMIA-----SSIAKVLASVITYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPGFYRGCATNLLRTTPSAVITFTSYEIIQSFL 591
            +LKL  +  +++L    +  A     ++++K+ A   TYP++VVR+RLQ+Q       V Y GV D + K ++KEG  GFY+G A NL+R TP+  ITF  YE +  FL
Sbjct:  205 LLKLKYNKHINRLPEAQLSTAEYISVAALSKIFAVAATYPYQVVRARLQDQ------HVSYGGVTDVITKTWRKEGIGGFYKGIAPNLIRVTPACCITFVVYENVSHFL 307          

HSP 2 Score: 30.4166 bits (67), Expect = 3.092e-18
Identity = 13/23 (56.52%), Postives = 16/23 (69.57%), Query Frame = 2
Query:  110 GILPSLAGVSHVAIQFPAYERIK 178
            G +P L G SH A+QF AYE +K
Sbjct:  185 GFVPGLFGTSHGALQFMAYELLK 207          
BLAST of CX675659 vs. ExPASy Swiss-Prot
Match: MCFW_DICDI (Mitochondrial substrate carrier family protein W OS=Dictyostelium discoideum GN=mcfW PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.329e-18
Identity = 43/87 (49.43%), Postives = 60/87 (68.97%), Query Frame = 1
Query:  331 IMIASSIAKVLASVITYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPGFYRGCATNLLRTTPSAVITFTSYEIIQSFL 591
            IMIASS++K++ASV+ YPHEV+R+R Q+   +         ++   K++ ++EG+ G YRG   NLLR TPS VITFTSYE I+ FL
Sbjct:  236 IMIASSVSKIIASVVAYPHEVLRARSQDSSPDSPNRTYRGNIIQMFKQIVREEGWRGLYRGMGVNLLRVTPSCVITFTSYEYIKKFL 322          
BLAST of CX675659 vs. ExPASy Swiss-Prot
Match: MFTC_MACFA (Mitochondrial folate transporter/carrier OS=Macaca fascicularis GN=SLC25A32 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.021e-18
Identity = 42/110 (38.18%), Postives = 68/110 (61.82%), Query Frame = 1
Query:  280 ILKLSDDTDVDKLNPGSI-----MIASSIAKVLASVITYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPGFYRGCATNLLRTTPSAVITFTSYEIIQSFLL 594
            +LKL  +  +++L    +     +  ++++K+ A   TYP++VVR+RLQ+Q       + Y+GV+D + K ++KEG  GFY+G A NL+R TP+  ITF  YE +  FLL
Sbjct:  205 LLKLKYNQHINRLPEAQLSTVEYISVAALSKIFAVAATYPYQVVRARLQDQ------HMFYSGVIDVITKTWRKEGIGGFYKGIAPNLIRVTPACCITFVVYENVSHFLL 308          

HSP 2 Score: 30.4166 bits (67), Expect = 4.021e-18
Identity = 13/23 (56.52%), Postives = 16/23 (69.57%), Query Frame = 2
Query:  110 GILPSLAGVSHVAIQFPAYERIK 178
            G +P L G SH A+QF AYE +K
Sbjct:  185 GFVPGLFGTSHGALQFMAYELLK 207          
BLAST of CX675659 vs. ExPASy Swiss-Prot
Match: MFTC_HUMAN (Mitochondrial folate transporter/carrier OS=Homo sapiens GN=SLC25A32 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.228e-18
Identity = 42/110 (38.18%), Postives = 68/110 (61.82%), Query Frame = 1
Query:  280 ILKLSDDTDVDKLNPGSI-----MIASSIAKVLASVITYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPGFYRGCATNLLRTTPSAVITFTSYEIIQSFLL 594
            +LKL  +  +++L    +     +  ++++K+ A   TYP++VVR+RLQ+Q       + Y+GV+D + K ++KEG  GFY+G A NL+R TP+  ITF  YE +  FLL
Sbjct:  205 LLKLKYNQHINRLPEAQLSTVEYISVAALSKIFAVAATYPYQVVRARLQDQ------HMFYSGVIDVITKTWRKEGVGGFYKGIAPNLIRVTPACCITFVVYENVSHFLL 308          

HSP 2 Score: 30.4166 bits (67), Expect = 5.228e-18
Identity = 13/23 (56.52%), Postives = 16/23 (69.57%), Query Frame = 2
Query:  110 GILPSLAGVSHVAIQFPAYERIK 178
            G +P L G SH A+QF AYE +K
Sbjct:  185 GFVPGLFGTSHGALQFMAYELLK 207          
BLAST of CX675659 vs. ExPASy Swiss-Prot
Match: YIA6_YEAST (Uncharacterized mitochondrial carrier YIL006W OS=Saccharomyces cerevisiae GN=YIL006W PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.577e-16
Identity = 35/100 (35.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query:  292 SDDTDVDKLNPGSIMIASSIAKVLASVITYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPGFYRGCATNLLRTTPSAVITFTSYEIIQSFL 591
            S + + + +N   +++ASS++K++AS +TYPHE++R+R+Q +      D     +   +K  + +EG  GFY G  TNL+RT P++ IT  S+E  ++ L
Sbjct:  268 SRENNTNSINLQRLIMASSVSKMIASAVTYPHEILRTRMQLKSD--IPDSIQRRLFPLIKATYAQEGLKGFYSGFTTNLVRTIPASAITLVSFEYFRNRL 365          

HSP 2 Score: 34.6538 bits (78), Expect = 1.577e-16
Identity = 14/24 (58.33%), Postives = 19/24 (79.17%), Query Frame = 2
Query:  107 SGILPSLAGVSHVAIQFPAYERIK 178
            +G++PSL G+ HVAI FP YE +K
Sbjct:  238 AGLVPSLLGLFHVAIHFPIYEDLK 261          
BLAST of CX675659 vs. ExPASy Swiss-Prot
Match: MCFM_DICDI (Mitochondrial substrate carrier family protein M OS=Dictyostelium discoideum GN=mcfM PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.222e-15
Identity = 41/94 (43.62%), Postives = 55/94 (58.51%), Query Frame = 1
Query:  307 VDKLNPGSIMIASSIAKVLASVITYPHEVVRSRLQEQGQ--NRKVDVQYAGVVDCVKKVFQKEGFPGFYRGCATNLLRTTPSAVITFTSYEIIQ 582
            +D LN   I IASSI+K LAS I YP +VV++RLQ++    N+     Y G  D + K+ + EG  GFYRG   N L+  P+  IT   YE I+
Sbjct:  204 LDSLNASEIFIASSISKFLASTILYPFQVVKTRLQDERNIPNQNNVRVYNGTKDVIFKILKNEGIIGFYRGLVPNTLKVIPNTSITLLLYEEIK 297          

HSP 2 Score: 27.335 bits (59), Expect = 6.222e-15
Identity = 12/27 (44.44%), Postives = 16/27 (59.26%), Query Frame = 2
Query:  110 GILPSLAGVSHVAIQFPAYERIKHYMA 190
            G++PSL    H  IQ  +YE IK Y +
Sbjct:  171 GVIPSLWLTFHGGIQMSSYEHIKFYFS 197          
BLAST of CX675659 vs. ExPASy Swiss-Prot
Match: YEA6_YEAST (Probable mitochondrial carrier YEL006W OS=Saccharomyces cerevisiae GN=YEL006W PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.710e-14
Identity = 38/97 (39.18%), Postives = 65/97 (67.01%), Query Frame = 1
Query:  301 TDVDKLNPGSIMIASSIAKVLASVITYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPGFYRGCATNLLRTTPSAVITFTSYEIIQSFL 591
            TDV   N   +++AS ++K++AS +TYPHE++R+R+Q +        ++  ++  +K  +++EGF GFY G ATNL+RT P+AV+T  S+E  + +L
Sbjct:  236 TDVTSSNFQKLILASMLSKMVASTVTYPHEILRTRMQLKSDLPNTVQRH--LLPLIKITYRQEGFAGFYSGFATNLVRTVPAAVVTLVSFEYSKKYL 330          
BLAST of CX675659 vs. ExPASy Swiss-Prot
Match: YKQ9_SCHPO (Uncharacterized mitochondrial carrier C688.09 OS=Schizosaccharomyces pombe GN=SPAC688.09 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.294e-14
Identity = 41/99 (41.41%), Postives = 60/99 (60.61%), Query Frame = 1
Query:  298 DTDVDK-LNPGSIMIASSIAKVLASVITYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPGFYRGCATNLLRTTPSAVITFTSYEIIQSFL 591
            +T  DK L+ G  +  + IAK +A+ I YPHEVVR+RL+ Q  +     +Y G++ C K V+ ++G  G Y G   +LLR  P+A I F SYE+I  F+
Sbjct:  263 ETIYDKVLDWGGKLGGAGIAKFMAAGIAYPHEVVRTRLR-QSPSINGTPKYTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVVPNACILFGSYEVIMHFI 360          

HSP 2 Score: 25.7942 bits (55), Expect = 2.294e-14
Identity = 11/27 (40.74%), Postives = 16/27 (59.26%), Query Frame = 2
Query:  110 GILPSLAGVSHVAIQFPAYERIKHYMA 190
            G+  SL GV    +Q+  YE+ KH +A
Sbjct:  224 GLSASLLGVGESTLQWVLYEKFKHAVA 250          
BLAST of CX675659 vs. ExPASy Swiss-Prot
Match: S2533_DANRE (Solute carrier family 25 member 33 OS=Danio rerio GN=slc25a33 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.972e-13
Identity = 40/100 (40.00%), Postives = 55/100 (55.00%), Query Frame = 1
Query:  298 DTDVDKLNPG--SIMIASSIAKVLASVITYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPGFYRGCATNLLRTTPSAVITFTSYEIIQSFL 591
            DTD DK       +M A++ AK  AS I YPHEV+R+RL+E+G   K   Q A      + V  +EG+  FYRG    L+R  P+  I  ++YE+I   L
Sbjct:  216 DTDNDKGASDFLGLMFAAAFAKGCASCIAYPHEVIRTRLREEGSKYKYFFQTA------RLVAVEEGYAAFYRGLIPQLIRQIPNTAIVLSTYELIVHLL 309          

HSP 2 Score: 27.335 bits (59), Expect = 8.972e-13
Identity = 12/28 (42.86%), Postives = 17/28 (60.71%), Query Frame = 2
Query:  110 GILPSLAGVSHVAIQFPAYERIKHYMAK 193
            G+  S AG+S   I F  YE +K Y+A+
Sbjct:  182 GLTASYAGISETMICFLIYETLKKYLAQ 209          
BLAST of CX675659 vs. ExPASy Swiss-Prot
Match: S2540_DICDI (Mitochondrial substrate carrier family protein H OS=Dictyostelium discoideum GN=mcfH PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.355e-11
Identity = 37/102 (36.27%), Postives = 64/102 (62.75%), Query Frame = 1
Query:  292 SDDTDVDKLNPGSIMIASSIAKVLASVITYPHEVVRSRLQEQGQNRKVDVQYA--GVVDCVKKVFQKEGFPGFYRGCATNLLRTTPSAVITFTSYEIIQSFL 591
            ++D+++ K N   +M+AS    +++S+I  P +VV++RLQ Q     ++ ++   G +D  KK+++ EG   F+RG   +LL T PSA I FTSYE ++ +L
Sbjct:   22 NNDSNIHK-NVKKLMVASIFGGIMSSLIVTPLDVVKTRLQTQNTGSHINQKHVFKGTLDAFKKIYKNEGPLTFWRGVTPSLLMTIPSATIYFTSYEYLKEYL 122          
The following BLAST results are available for this feature:
BLAST of CX675659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
MFTC_MOUSE3.092e-1839.45Mitochondrial folate transporter/carrier OS=Mus mu... [more]
MCFW_DICDI3.329e-1849.43Mitochondrial substrate carrier family protein W O... [more]
MFTC_MACFA4.021e-1838.18Mitochondrial folate transporter/carrier OS=Macaca... [more]
MFTC_HUMAN5.228e-1838.18Mitochondrial folate transporter/carrier OS=Homo s... [more]
YIA6_YEAST1.577e-1635.00Uncharacterized mitochondrial carrier YIL006W OS=S... [more]
MCFM_DICDI6.222e-1543.62Mitochondrial substrate carrier family protein M O... [more]
YEA6_YEAST1.710e-1439.18Probable mitochondrial carrier YEL006W OS=Saccharo... [more]
YKQ9_SCHPO2.294e-1441.41Uncharacterized mitochondrial carrier C688.09 OS=S... [more]
S2533_DANRE8.972e-1340.00Solute carrier family 25 member 33 OS=Danio rerio ... [more]
S2540_DICDI1.355e-1136.27Mitochondrial substrate carrier family protein H O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_63G12_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-63G12-M23-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675659 ID=CX675659; Name=CX675659; organism=Citrus sinensis; type=EST; length=843bp
TTGCAAACATTGTTTCTACAATTTTTGTTTGACATAACTTTGATCTTCAA
ATTTTATTTTCCTTCAATTCTTTTGGTCGCTTAATGTTGCTTCCATGCTT
TGAAATAGTGGCATTCTGCCTTCGTTGGCTGGAGTTAGTCATGTTGCTAT
TCAGTTTCCTGCATATGAGAGAATCAAGCATTACATGGCCAAAAAGGGTA
AAATGATCGCTGTACCATTTTGCTCTTTTTTTCAATTAAATAGATGATAT
GTAACATTTATTCTTTGCTAATCATGTTAATTTTGAAGTTATCAGATGAC
ACAGATGTTGATAAGCTAAATCCTGGAAGTATTATGATTGCTTCTTCAAT
AGCAAAAGTACTTGCCTCTGTAATTACTTACCCACATGAGGTTGTACGTT
CAAGGCTTCAAGAGCAAGGGCAGAACAGAAAGGTTGATGTACAATATGCA
GGCGTTGTTGATTGTGTCAAGAAGGTATTCCAAAAGGAAGGTTTCCCTGG
CTTTTACCGTGGCTGTGCGACAAATCTATTGAGAACAACTCCATCTGCTG
TAATTACGTTTACCAGTTATGAGATAATACAGAGCTTCTTGCTGCGAGTT
CTACCTCCGGACAAGAATCATTCACAAATCCAGCCTAAATCTGGTGAGCA
TGTCAAGCCTCAGCAGAAAATCGATGAAGCTGGGGCTGAAGAAAACGATA
CTTTGCGGCAATCACAAATCCAATCAAACAAACTGACTCCCTCAATTCCT
CTCGGAAGTAAGGATCAGCTAACCGCGAGACACTGACCGGCTTTTTTCTT
TTCCAACTTCCCTGTTGGGGAAATTTTCCATCTTCCCTGTTGG
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