CK939326

Overview
NameCK939326
Unique NameCK939326
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4803 contig Csv1_Contig4803:51..756. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK939326 vs. ExPASy Swiss-Prot
Match: PPA2_ARATH (Probable inactive purple acid phosphatase 2 OS=Arabidopsis thaliana GN=PAP2 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.074e-49
Identity = 96/182 (52.75%), Postives = 122/182 (67.03%), Query Frame = 3
Query:    6 RYXXFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRLVATKEKLTLSYVGNHDGEVHDMVEILASGQVLSGGVAASVKESETTXXXXXXXXXXPRGELTKSTFSWFVQGASILVLGAFVGYVIGYISHTKKAATSGRSWTPVKTNE 551
            RY  FCP++N TCG+           PVH+VIGMAGQDWQPIWQPRP+HPD P+FPQP +S+YR GEFGYTRLVA KEKLT+S+VGNHDGEVHD VE+LASG V+SG      KES                  ++S   W+ +GA ++V+G  +G++IG+ +  KK ++SG  W PVK  E
Sbjct:  486 RYERFCPISNNTCGTQWQGN------PVHLVIGMAGQDWQPIWQPRPNHPDLPIFPQPEQSMYRTGEFGYTRLVANKEKLTVSFVGNHDGEVHDTVEMLASGVVISGS-----KESTKIPNLKTVPASATLMGKSESNALWYAKGAGLMVVGVLLGFIIGFFTRGKK-SSSGNRWIPVKNEE 655          
BLAST of CK939326 vs. ExPASy Swiss-Prot
Match: PPA9_ARATH (Probable inactive purple acid phosphatase 9 OS=Arabidopsis thaliana GN=PAP9 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.099e-45
Identity = 93/185 (50.27%), Postives = 119/185 (64.32%), Query Frame = 3
Query:    6 RYXXFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRLVATKEKLTLSYVGNHDGEVHDMVEILASGQVLSGGVAASVKESETTXXXXXXXXXXPRGELTKSTFSWFVQGASILVLGAFVGYVIGYISHTKK---AATSGRSWTPVKTNE 551
            RY  FC ++N TCG      E  +  PVH+VIGMAG+D QP+W+PR +H D P+FPQP  S+YRGGEFGY RLVA KE+LTLSYVGNHDGEVHD+VEILASG+V+SG      K+S               G  +     W+++GAS++V+G   GY +G++S  KK     +S RSW  VK  E
Sbjct:  486 RYERFCAISNNTCG------ERWQGNPVHLVIGMAGKDSQPMWEPRANHEDVPIFPQPANSMYRGGEFGYIRLVANKERLTLSYVGNHDGEVHDVVEILASGEVISGS-DDGTKDSNF-------------GSESDFAVLWYIEGASVMVVGVIFGYFVGFLSRKKKESGVGSSNRSWIQVKNEE 650          
The following BLAST results are available for this feature:
BLAST of CK939326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PPA2_ARATH2.074e-4952.75Probable inactive purple acid phosphatase 2 OS=Ara... [more]
PPA9_ARATH3.099e-4550.27Probable inactive purple acid phosphatase 9 OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004752_A05 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IVF_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939326 ID=CK939326; Name=CK939326; organism=Citrus sinensis; type=EST; length=706bp
GGGATAGATATGNNNGGTTCTGCCCACTGAATAATTTCACATGTGGAAGC
ATGGGCATGGATGGGGAGCCCTCAGAGGCATTTCCGGTTCATATTGTGAT
CGGGATGGCTGGACAAGACTGGCAGCCGATATGGCAACCTAGACCAGACC
ACCCAGATGATCCAGTCTTCCCTCAGCCTATGCGATCTTTGTACCGTGGG
GGTGAATTTGGATATACGAGGTTGGTTGCCACAAAGGAGAAGCTCACACT
TTCTTATGTAGGGAATCATGACGGAGAGGTGCATGATATGGTTGAGATCC
TTGCATCTGGACAGGTTCTCAGTGGTGGTGTTGCTGCGAGTGTCAAGGAA
AGTGAAACTACCAGTGGTAGTGGTAGTGGGTCTGGTTCTGGACCTAGAGG
TGAGTTAACCAAGTCTACTTTTTCATGGTTTGTCCAGGGAGCAAGTATCT
TGGTGCTGGGGGCTTTTGTGGGCTATGTCATTGGCTACATTTCACACACC
AAGAAGGCAGCTACATCAGGAAGGAGCTGGACTCCTGTTAAGACTAATGA
AGATGCATGAACTATAAATAGCAGTGAAAATATTTTGCTAGAAATTGCAA
ATGATTGTGTTTTTTAATTTTCGAAACTTGTTTCCTCCATGGGATTAGGT
TTTGAAGTTTCGAAGCAATGGTATTNNANNTCTTGGCCTGGCTATGGCCA
AAATCG
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