CK939309

Overview
NameCK939309
Unique NameCK939309
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length385
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9908 contig Csv1_Contig9908:222..606. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK939309 vs. ExPASy Swiss-Prot
Match: NAC78_ARATH (NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2)

HSP 1 Score: 228.024 bits (580), Expect = 1.148e-59
Identity = 103/126 (81.75%), Postives = 112/126 (88.89%), Query Frame = 3
Query:    6 TS*APGFRFHPTDEELVRYYLKRKDCHRPLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMH 383
            TS APGFRFHPTDEELVRYYLKRK C++P +F+ I VTDIYKSEPWDLPDKS LK+RD EWYFFSMLDKKY NGS+TNRATEKGYWKTTGKDR + + +R VGMKKTLVYH GRAP GERTNWVMH
Sbjct:    7 TSLAPGFRFHPTDEELVRYYLKRKVCNKPFKFDAISVTDIYKSEPWDLPDKSKLKSRDLEWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRNGSRVVGMKKTLVYHKGRAPRGERTNWVMH 132          
BLAST of CK939309 vs. ExPASy Swiss-Prot
Match: NAC74_ORYSJ (NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 3.594e-37
Identity = 67/122 (54.92%), Postives = 86/122 (70.49%), Query Frame = 3
Query:   18 PGFRFHPTDEELVRYYLKRKDCHRPLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMH 383
            PGF FHP D EL+ +YLK+K   + + +  I   DIYK EPWDLP K  + T+D +W+FF+  D+KY NGSR+NRAT  GYWK+TGKDR +    +T+G KKTLV+H GR P G RT W+MH
Sbjct:   11 PGFGFHPKDTELISHYLKKKIHGQKIEYEIIPEVDIYKHEPWDLPAKCDVPTQDNKWHFFAARDRKYPNGSRSNRATVAGYWKSTGKDRAIKMGKQTIGTKKTLVFHEGRPPTGRRTEWIMH 132          
BLAST of CK939309 vs. ExPASy Swiss-Prot
Match: NAC68_ORYSJ (NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.156e-35
Identity = 70/124 (56.45%), Postives = 88/124 (70.97%), Query Frame = 3
Query:   18 PGFRFHPTDEELVRYYLKRKDCHRPLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPV--HHNTRTVGMKKTLVYHMGRAPHGERTNWVMH 383
            PGFRFHPTDEELV +YL RK   +PL    I   D+YK +PWDLP+K+      KEWYFF+  D+KY NGSR NRA  +GYWK TG D+PV    + RTVG+KK LV++ G+AP G +T+W+MH
Sbjct:   23 PGFRFHPTDEELVVHYLCRKVARQPLPVPIIAEVDLYKLDPWDLPEKALFGR--KEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVFYSGKAPRGVKTDWIMH 144          
BLAST of CK939309 vs. ExPASy Swiss-Prot
Match: NAC98_ARATH (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 2.576e-35
Identity = 71/124 (57.26%), Postives = 85/124 (68.55%), Query Frame = 3
Query:   18 PGFRFHPTDEELVRYYLKRKDCHRPLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHN--TRTVGMKKTLVYHMGRAPHGERTNWVMH 383
            PGFRFHPTDEEL+ +YL RK          I   D+ K EPW LP ++  K  +KEWYFFS+ D+KY  G RTNRATE GYWK TGKDR +  +     VGMKKTLV++ GRAP GE++NWVMH
Sbjct:   19 PGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRA--KMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKSNWVMH 140          
BLAST of CK939309 vs. ExPASy Swiss-Prot
Match: NAC54_ARATH (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 3.364e-35
Identity = 70/124 (56.45%), Postives = 87/124 (70.16%), Query Frame = 3
Query:   18 PGFRFHPTDEELVRYYLKRKDCHRPLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHN--TRTVGMKKTLVYHMGRAPHGERTNWVMH 383
            PGFRFHPTDEEL+ YYL +K          I   D+ KSEPW+LP+K+  K  +KEWYFF++ D+KY  G RTNRATE GYWK TGKDR +  +     +GMKKTLV++ GRAP GE++ WVMH
Sbjct:   22 PGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELPEKA--KMGEKEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKGEKSCWVMH 143          
BLAST of CK939309 vs. ExPASy Swiss-Prot
Match: NAC94_ARATH (Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana GN=ANAC094 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 4.393e-35
Identity = 67/124 (54.03%), Postives = 90/124 (72.58%), Query Frame = 3
Query:   18 PGFRFHPTDEELVRYYLKRKDCHRPLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVH--HNTRTVGMKKTLVYHMGRAPHGERTNWVMH 383
            PGFRFHPTDEELV +YLKRK  H+ L F+ I   DIYK +PWDLP  +++   +KEWYF+   D+KY N +R NR T  G+WK TG DRP++   +TR +G+KK+LV++ GRA  G +T+W+MH
Sbjct:   22 PGFRFHPTDEELVSFYLKRKVLHKSLPFDLIKKVDIYKYDPWDLPKLAAM--GEKEWYFYCPRDRKYRNSTRPNRVTGGGFWKATGTDRPIYSLDSTRCIGLKKSLVFYRGRAAKGVKTDWMMH 143          
BLAST of CK939309 vs. ExPASy Swiss-Prot
Match: NAC76_ORYSJ (NAC domain-containing protein 76 OS=Oryza sativa subsp. japonica GN=NAC76 PE=2 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 5.738e-35
Identity = 66/124 (53.23%), Postives = 89/124 (71.77%), Query Frame = 3
Query:   18 PGFRFHPTDEELVRYYLKRKDCHRPLRFNPICVTDIYKSEPWDLPDKSSLKT-RDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVH-HNTRTVGMKKTLVYHMGRAPHGERTNWVMH 383
            PGFRFHPTDEEL+ YYL++K  +  +  + I   D+ K EPWDL D+  + T    EWYFFS  DKKY  G+RTNRAT  G+WK TG+D+ +   N   +GM+KTLV+++GRAPHG++T+W+MH
Sbjct:   12 PGFRFHPTDEELLYYYLRKKVAYEAIDLDVIREIDLNKLEPWDLKDRCRIGTGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIFLANACRIGMRKTLVFYVGRAPHGKKTDWIMH 135          
BLAST of CK939309 vs. ExPASy Swiss-Prot
Match: NAC7_ARATH (NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 2.180e-34
Identity = 62/123 (50.41%), Postives = 90/123 (73.17%), Query Frame = 3
Query:   18 PGFRFHPTDEELVRYYLKRKDCHRPLRFNPICVTDIYKSEPWDLPDKSSLKTRDK-EWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMH 383
            PGFRFHPTDEELV YYL++K   + +  + I   D+YK EPWDL +   +   ++ +WYFFS  DKKY  G+RTNRAT+ G+WK TG+D+ ++     +GM+KTLV++ GRAP+G++++W+MH
Sbjct:    9 PGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQELCKIGHEEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFYKGRAPNGQKSDWIMH 131          
BLAST of CK939309 vs. ExPASy Swiss-Prot
Match: NAC43_ARATH (NAC domain-containing protein 43 OS=Arabidopsis thaliana GN=NAC043 PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 2.180e-34
Identity = 62/123 (50.41%), Postives = 90/123 (73.17%), Query Frame = 3
Query:   18 PGFRFHPTDEELVRYYLKRKDCHRPLRFNPICVTDIYKSEPWDLPDKSSLKTRDK-EWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMH 383
            PGFRFHPT+EEL++YYL++K     +  + I   D+ K EPWD+ +   + T  + +WYFFS  DKKY  G+RTNRAT  G+WK TG+D+ ++ N R +GM+KTLV++ GRAPHG++++W+MH
Sbjct:   18 PGFRFHPTEEELLQYYLRKKVNSIEIDLDVIRDVDLNKLEPWDIQEMCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSNGRRIGMRKTLVFYKGRAPHGQKSDWIMH 140          
BLAST of CK939309 vs. ExPASy Swiss-Prot
Match: NAC9_ARATH (Putative NAC domain-containing protein 9 OS=Arabidopsis thaliana GN=NAC009 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 2.848e-34
Identity = 67/124 (54.03%), Postives = 84/124 (67.74%), Query Frame = 3
Query:   18 PGFRFHPTDEELVRYYLKRKDCHRPLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVH--HNTRTVGMKKTLVYHMGRAPHGERTNWVMH 383
            PGFRFHPTDEELV +YLKRK  H PL    I   DIYK +PWDLP      T +KEWYF+   D+KY N SR NR T  G+WK TG DRP++     + +G+KK+LV++ GRA  G +T+W+MH
Sbjct:   18 PGFRFHPTDEELVSFYLKRKVQHNPLSIELIRQLDIYKYDPWDLP--KFAMTGEKEWYFYCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSSEGNKCIGLKKSLVFYKGRAAKGVKTDWMMH 139          
The following BLAST results are available for this feature:
BLAST of CK939309 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NAC78_ARATH1.148e-5981.75NAC domain-containing protein 78 OS=Arabidopsis th... [more]
NAC74_ORYSJ3.594e-3754.92NAC domain-containing protein 74 OS=Oryza sativa s... [more]
NAC68_ORYSJ1.156e-3556.45NAC domain-containing protein 68 OS=Oryza sativa s... [more]
NAC98_ARATH2.576e-3557.26Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thal... [more]
NAC54_ARATH3.364e-3556.45Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thal... [more]
NAC94_ARATH4.393e-3554.03Putative NAC domain-containing protein 94 OS=Arabi... [more]
NAC76_ORYSJ5.738e-3553.23NAC domain-containing protein 76 OS=Oryza sativa s... [more]
NAC7_ARATH2.180e-3450.41NAC domain-containing protein 7 OS=Arabidopsis tha... [more]
NAC43_ARATH2.180e-3450.41NAC domain-containing protein 43 OS=Arabidopsis th... [more]
NAC9_ARATH2.848e-3454.03Putative NAC domain-containing protein 9 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004752_E02 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IVF_E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939309 ID=CK939309; Name=CK939309; organism=Citrus sinensis; type=EST; length=385bp
CATCGACGTCGTAAGCTCCGGGGTTCCGATTTCACCCCACCGATGAGGAA
CTCGTTCGGTATTATTTGAAACGGAAGGATTGCCATAGACCGCTCCGGTT
CAACCCAATCTGCGTCACCGATATTTACAAGTCCGAGCCTTGGGACCTAC
CCGATAAGTCGAGTTTGAAAACTAGGGACAAGGAGTGGTATTTTTTTAGT
ATGTTGGATAAGAAGTATGGCAATGGGTCGAGGACCAATAGGGCCACTGA
AAAAGGATACTGGAAGACCACTGGGAAGGATCGCCCTGTTCATCATAATA
CGCGGACTGTTGGGATGAAGAAGACCCTTGTCTATCACATGGGGAGGGCT
CCTCATGGTGAACGTACCAATTGGGTGATGCATGA
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