CX675649

Overview
NameCX675649
Unique NameCX675649
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length764
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX675649 vs. ExPASy Swiss-Prot
Match: Y1666_ARATH (Uncharacterized protein At1g76660 OS=Arabidopsis thaliana GN=At1g76660 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.825e-42
Identity = 94/161 (58.39%), Postives = 112/161 (69.57%), Query Frame = -1 
Query:  285 HDTTGGSRVSQDTNFFCPATFAQFYLDHDSPFPHTGGRLSVSKDSDVYP-NG-ANGNQNRHTKSPKQDVEELEAYRASFGFSADEIITTPQYVEITDVMDDSFTMMPFTSDKPAFEESLPASMDGQKPQGRESNLLNPKNLKSDSDLMNGGIHHELTESSD 761
            +DT G S   Q++NFFCP TFA+FYLDHD   P  GGRLSVSKDSDVYP NG  NGNQNR  +SPKQD+EELEAYRASFGFSADEIITT QYVEITDVMD SF    ++              DGQK   RE+NLL+  + KS++DL +  +  +  +SS+
Sbjct:  224 YDTNGVSTPLQESNFFCPETFAKFYLDHDPSVPQNGGRLSVSKDSDVYPTNGYGNGNQNRQNRSPKQDMEELEAYRASFGFSADEIITTSQYVEITDVMDGSFNTSAYSPS------------DGQKLLRREANLLSQTSPKSEADLDSQVVDFQSPKSSN 372
The following BLAST results are available for this feature:
BLAST of CX675649 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1666_ARATH4.825e-4258.39Uncharacterized protein At1g76660 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_63G07_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-63G07-M13-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675649 ID=CX675649; Name=CX675649; organism=Citrus sinensis; type=EST; length=764bp
TATAAATCAAACCCAAACCTAATCTTGGAATAAACAATTTCAAATCATAC
GACCTTTTTATAAATTTTATTATTTTGTAAAGTGACCGATTTTACAAGGT
GAGGTTTCTGATTGAAAAACTAAAACGAAAATGAAGTGCAAAAAAATGAT
CCACATTGTCAGGAGAAATAAATATCAGACAATTGACAAAAAATTTTGAA
GTGGTTTTCTTTTGCTTCCCGTTTTCATTTTTTCCAGACTTAGTAACATT
TTAGATTTATTTAAGAGAGTTTACCTTCACATCCATCACTTGATTCAGTC
AGTTCATGGTGTATGCCCCCATTCATAAGATCAGAATCAGATTTAAGGTT
TTTTGGATTCAGCAAGTTAGATTCTCTTCCCTGAGGCTTTTGTCCATCCA
TTGATGCAGGTAAACTTTCTTCAAAGGCAGGTTTATCTGAGGTAAAAGGC
ATCATGGTAAATGAGTCATCCATTACATCAGTGATCTCTACATATTGAGG
CGTAGTGATGATTTCATCCGCACTGAATCCAAATGAAGCTCTGTAAGCTT
CTAACTCTTCCACATCTTGCTTGGGACTCTTGGTATGCCTGTTTTGATTC
CCATTTGCACCATTTGGGTAAACATCTGAATCCTTGGAAACGCTTAACCT
TCCACCAGTATGAGGAAATGGGGAATCGTGATCCAGATAGAACTGCGCAA
ATGTAGCAGGACAGAAAAAATTTGTGTCTTGAGAGACCCTGGAGCCACCA
GTGGTGTCATGTGT
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