CX675648

Overview
NameCX675648
Unique NameCX675648
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX675648_ssr97 microsatellite CX675648_ssr97:97..106. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CX675648 vs. ExPASy Swiss-Prot
Match: LIP2_ARATH (Triacylglycerol lipase 2 OS=Arabidopsis thaliana GN=LIP2 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 4.780e-50
Identity = 88/170 (51.76%), Postives = 124/170 (72.94%), Query Frame = -2
Query:  142 EFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFKLQ 651
            EF+P+   V   +K IC K G+DC +L++  TG+NCCLN+S +D+FL +EPQ+TSTKNMIH+AQ +R+  +  Y+Y + + N KHYGQ  PP YN+++IPH+LPLF SYGG D+L+DV DV+ LL+    H+ DK+ VQ+ +DYAHAD++MG  A  V+Y  +  FFK Q
Sbjct:  248 EFNPKSGLVGDFIKAICLKAGIDCYDLVSVITGKNCCLNASTIDLFLANEPQSTSTKNMIHLAQTVRDKELRKYNYGSSDRNIKHYGQAIPPAYNISAIPHELPLFFSYGGLDSLADVKDVEFLLDQFKYHDIDKMNVQFVKDYAHADFIMGVTAKDVVYNQVATFFKRQ 417          
BLAST of CX675648 vs. ExPASy Swiss-Prot
Match: LIP1_ARATH (Triacylglycerol lipase 1 OS=Arabidopsis thaliana GN=LIP1 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 6.491e-31
Identity = 67/174 (38.51%), Postives = 109/174 (62.64%), Query Frame = -2
Query:  136 LDEFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFKLQ*K 657
            L + + R + +VKL+ ++C+   +DCT+ L S TG NCC N+S ++ +L++EP  +S KN+ H+ QMIR+GT A YDY    +N + YG   PP + ++ IP  LP+++ YGG D L+DV DV+  L  L         + Y +DY H D+V+G +A + +Y+ ++ FF+ + K
Sbjct:  222 LHQINFRSDMLVKLVDSLCEGH-MDCTDFLTSITGTNCCFNASKIEYYLDYEPHPSSVKNIRHLFQMIRKGTFAQYDY-GYFKNLRTYGLSKPPEFILSHIPASLPMWMGYGGTDGLADVTDVEHTLAELPSSP----ELLYLEDYGHIDFVLGSSAKEDVYKHMIQFFRAKVK 389          
BLAST of CX675648 vs. ExPASy Swiss-Prot
Match: LIPK_HUMAN (Lipase member K OS=Homo sapiens GN=LIPK PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.500e-19
Identity = 53/144 (36.81%), Postives = 84/144 (58.33%), Query Frame = -2
Query:  160 CTNLLNSFTG---QNCCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLM 582
            C+N L + +G   QN  LN S +DV+L H P  TS +NM+H AQ +  G +  +D+ N ++N  H+ Q  PPLYN+T +  ++P  +  GG D ++D  DV+ LL  + +    KL+  Y     H D+ +GE+A Q +Y+ L+
Sbjct:  255 CSNFLFTLSGFDPQN--LNMSRLDVYLSHNPAGTSVQNMLHWAQAVNSGQLQAFDWGNSDQNMMHFHQLTPPLYNITKM--EVPTAIWNGGQDIVADPKDVENLLPQIANLIYYKLIPHYN----HVDFYLGEDAPQEIYQDLI 390          
BLAST of CX675648 vs. ExPASy Swiss-Prot
Match: LIPK_MOUSE (Lipase member K OS=Mus musculus GN=Lipk PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.967e-17
Identity = 49/146 (33.56%), Postives = 82/146 (56.16%), Query Frame = -2
Query:  160 CTNLLNSFTG---QNCCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQ--DYAHADYVMGENAGQVLYEPLM 582
            C+N L S +G   QN  LN S +DV+L   P  TS +NM+H AQ +  G +  +D+ N ++N  H+ Q  PP+YN++ +   +P  +  GG D ++D  D K LL  + +      ++ Y++   Y H D+ +G++A Q +Y  L+
Sbjct:  254 CSNFLFSLSGFDPQN--LNMSRLDVYLSQSPAGTSVQNMLHWAQAVNSGQLQAFDWGNPDQNMMHFNQLTPPVYNISKM--RVPTAMWSGGQDVVADAKDTKNLLPKIAN------LIYYKEIPHYNHMDFYLGQDAPQEVYGDLI 389          
BLAST of CX675648 vs. ExPASy Swiss-Prot
Match: LIPG_CANFA (Gastric triacylglycerol lipase OS=Canis familiaris GN=LIPF PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 6.967e-17
Identity = 51/159 (32.08%), Postives = 86/159 (54.09%), Query Frame = -2
Query:  157 LLKNICQKPGVD--CTNLLNSFTGQNCC-LNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQ--DYAHADYVMGENAGQVLYEPLMA 618
            L   +C +  VD  C+N L    G +   LN S +DV+L H P  TS +N++H +Q ++ G    +D+ +  +N  HY Q  PP YN+T +   +P+ +  GG D L+D +DV LLL  L +      ++ +R+   Y H D++   +A Q +Y  +++
Sbjct:  241 LATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDM--HVPIAVWNGGNDLLADPHDVDLLLSKLPN------LIYHRKIPPYNHLDFIWAMDAPQAVYNEIVS 391          
BLAST of CX675648 vs. ExPASy Swiss-Prot
Match: LIPG_HUMAN (Gastric triacylglycerol lipase OS=Homo sapiens GN=LIPF PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.458e-16
Identity = 50/157 (31.85%), Postives = 83/157 (52.87%), Query Frame = -2
Query:  157 LLKNICQKPGVD--CTNLLNSFTG-QNCCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMA 618
            L   +C +  ++  C+N L    G  +   N+S +DV+L H P  TS +NM H  Q ++ G    YD+ +  +N+ HY Q  PP YN+T++  ++P+ +  GG D L+D  DV LLL  L +    K +  Y     H D++   +A Q +Y  +++
Sbjct:  241 LATEVCSREMLNLLCSNALFIICGFDSKNFNTSRLDVYLSHNPAGTSVQNMFHWTQAVKSGKFQAYDWGSPVQNRMHYDQSQPPYYNVTAM--NVPIAVWNGGKDLLADPQDVGLLLPKLPNLIYHKEIPFYN----HLDFIWAMDAPQEVYNDIVS 391          
BLAST of CX675648 vs. ExPASy Swiss-Prot
Match: LIPN_HUMAN (Lipase member N OS=Homo sapiens GN=LIPN PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 5.898e-16
Identity = 45/146 (30.82%), Postives = 77/146 (52.74%), Query Frame = -2
Query:  148 CTNLLNSFTGQNCC-LNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFK 582
            C+  ++ + G N   +N S +DV++ H P  +S  N++H+ Q+        YD+ N  +N KHY Q +PP+Y++T++   +P  +  GG D L    DV  +L  +      KL+     D+ H D+V G +A Q +Y  ++A  K
Sbjct:  256 CSEFMSLWAGSNKKNMNQSRMDVYMSHAPTGSSVHNILHIKQLYHSDEFRAYDWGNDADNMKHYNQSHPPIYDLTAM--KVPTAIWAGGHDVLVTPQDVARILPQIKSLHYFKLL----PDWNHFDFVWGLDAPQRMYSEIIALMK 395          
BLAST of CX675648 vs. ExPASy Swiss-Prot
Match: LIPG_BOVIN (Gastric triacylglycerol lipase OS=Bos taurus GN=LIPF PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.716e-15
Identity = 47/153 (30.72%), Postives = 81/153 (52.94%), Query Frame = -2
Query:  157 ICQKPGVD--CTNLLNSFTG-QNCCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMA 606
            +C +  +D  C N L + TG  N   N S +DV++ H P  TS +N +H  Q ++ G    +D+    +N  HY QP PP+YN+T++  ++P+ +     D L+D  DV  LL  L++    K +     +Y H D++   +A Q +Y  +++
Sbjct:  244 MCSRETLDVLCKNALFAITGVDNKNFNMSRLDVYIAHNPAGTSVQNTLHWRQAVKSGKFQAFDWGAPYQNLMHYHQPTPPIYNLTAM--NVPIAVWSADNDLLADPQDVDFLLSKLSNLIYHKEI----PNYNHLDFIWAMDAPQEVYNEIVS 390          
BLAST of CX675648 vs. ExPASy Swiss-Prot
Match: LIPN_MOUSE (Lipase member N OS=Mus musculus GN=Lipn PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.927e-15
Identity = 50/158 (31.65%), Postives = 82/158 (51.90%), Query Frame = -2
Query:  148 KLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFK 621
            KLL+ +C     +  +L   F  +N  +N S +DV++ H P  +S +NM+H+ Q+ R      YD+ ++ EN  HY Q  PPLY++T++   +P  +  GG D L    DV  +L  + +    K       D+ H D+V G +A Q LY  +++  K
Sbjct:  252 KLLQPLCS----EFMSLWAGFNKKN--MNMSRLDVYMAHAPTGSSIQNMLHIKQLYRSDEFRAYDWGSEAENMNHYNQSYPPLYDLTAM--KVPTAIWAGGHDVLVTPQDVARILPQITNLRYFKQF----PDWNHFDFVWGLDAPQRLYSKIISLMK 397          
BLAST of CX675648 vs. ExPASy Swiss-Prot
Match: LIPG_RAT (Gastric triacylglycerol lipase OS=Rattus norvegicus GN=Lipf PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.521e-15
Identity = 47/153 (30.72%), Postives = 83/153 (54.25%), Query Frame = -2
Query:  157 ICQKPGVD--CTNLLNSFTG-QNCCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMA 606
            +C +  +D  C+N L  F G     LN S  DV+L H P  TS ++ +H AQ++R G    +++ +  +N  HY Q  PP Y+++++   +P+ +  GG D L+D  DV +LL  L++    K ++ Y     H D++   +A Q +Y  +++
Sbjct:  244 VCSREVLDLLCSNTLFIFCGFDKKNLNVSRFDVYLGHNPAGTSVQDFLHWAQLVRSGKFQAFNWGSPSQNMLHYNQKTPPEYDVSAM--TVPVAVWNGGNDILADPQDVAMLLPKLSNLLFHKEILAYN----HLDFIWAMDAPQEVYNEMIS 390          
The following BLAST results are available for this feature:
BLAST of CX675648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
LIP2_ARATH4.780e-5051.76Triacylglycerol lipase 2 OS=Arabidopsis thaliana G... [more]
LIP1_ARATH6.491e-3138.51Triacylglycerol lipase 1 OS=Arabidopsis thaliana G... [more]
LIPK_HUMAN1.500e-1936.81Lipase member K OS=Homo sapiens GN=LIPK PE=2 SV=2[more]
LIPK_MOUSE6.967e-1733.56Lipase member K OS=Mus musculus GN=Lipk PE=2 SV=1[more]
LIPG_CANFA6.967e-1732.08Gastric triacylglycerol lipase OS=Canis familiaris... [more]
LIPG_HUMAN3.458e-1631.85Gastric triacylglycerol lipase OS=Homo sapiens GN=... [more]
LIPN_HUMAN5.898e-1630.82Lipase member N OS=Homo sapiens GN=LIPN PE=2 SV=2[more]
LIPG_BOVIN1.716e-1530.72Gastric triacylglycerol lipase OS=Bos taurus GN=LI... [more]
LIPN_MOUSE2.927e-1531.65Lipase member N OS=Mus musculus GN=Lipn PE=2 SV=1[more]
LIPG_RAT6.521e-1530.72Gastric triacylglycerol lipase OS=Rattus norvegicu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_63G06_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-63G06-M11-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675648 ID=CX675648; Name=CX675648; organism=Citrus sinensis; type=EST; length=658bp
TTTTTTTACAATTAAGTGATATTTGCATTAACATAAAAGTCATTTAATAA
AAAAAGGGTACATCTTTAGAGAACCAACGCAAATGATTCGAGCAGACTCT
CTCTCTTTGTCTTTCTGTGAGTTGTCTCATTTACATTTTCATTGTAGCTT
AAAGAAAGCCATGAGAGGCTCATACAGAACTTGCCCAGCATTTTCACCCA
TAACATAGTCTGCATGAGCATAATCCTGTCTGTACTGAACTACAAGCTTA
TCTCCCTCATGATCGTTGAGGCTCTCCAGCAGCAGTTTCACATCATTGAC
ATCCGAAAGAGCGTCGGCTCCTCCGTAACTGAGAAAGAGAGGAAGATCAT
GCGGAATGCTTGTCATGTTGTATAGAGGCGGATTCGGCTGCCCATAGTGT
TTCTTGTTCTCTTCTTTATTGTTGTAATCGTACATTGCAATGGTTCCTTC
TCTAATCATTTGAGCTACGTGGATCATGTTCTTAGTTGAAGTTGCCTGAG
GCTCGTGTTCTAGAAATACATCTACTATCGAAGAGTTTAGGCAGCAGTTT
TGGCCTGTGAAAGAGTTCAATAAGTTGGTACAATCAACTCCNGGTTTTTG
GCAAATGTTTTTAAGAAGTTTGACTACNGCCTCCCCTCTTGGATCAAATT
CATCAAGG
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