CK939234

Overview
NameCK939234
Unique NameCK939234
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length521
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939234 vs. ExPASy Swiss-Prot
Match: SEY1_DICDI (Protein SEY1 homolog OS=Dictyostelium discoideum GN=DDB_0206311 PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 2.849e-37
Identity = 82/156 (52.56%), Postives = 109/156 (69.87%), Query Frame = 3
Query:   75 GLSYAGVSIMGPQSSGKSTLLNHLFGTNFREMDAFKGRSQTTKGIWMARCAGID---PCTLIMDLEGTDGRKRGEDDTAFEKHSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRSFSPR---KTTLMFVIRDKTR-TPLENLEPVL 521
            G  Y+ +SI+GPQSSGKSTLLN LF T F  MDA  GR QTT+G+WM   +  +      LI+D+EGTDGR+RGED+ AFE+ ++LF+LA+S +++INMW HDIGR  AAN  LLKTVF++ ++ F  +   K  + F+IRD    TPLE L+  L
Sbjct:  138 GFDYSVISILGPQSSGKSTLLNLLFNTRFAVMDASTGRKQTTQGVWMGVASTTNNKNETFLILDVEGTDGRERGEDEKAFERKTSLFSLALSSVLIINMWAHDIGRYNAANISLLKTVFELNLQLFQKKRNHKILIFFLIRDHDGVTPLERLKATL 293          
BLAST of CK939234 vs. ExPASy Swiss-Prot
Match: SEY12_TRIVA (Protein SEY1 homolog 2 OS=Trichomonas vaginalis GN=TVAG_100140 PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 3.721e-37
Identity = 86/173 (49.71%), Postives = 118/173 (68.21%), Query Frame = 3
Query:    3 IDGDGTFNVSGIEHFI*EVKLSDCGLSYAGVSIMGPQSSGKSTLLNHLFGTNFREMDAFKGRSQTTKGIWMARCAGIDPCTLIMDLEGTDGRKRGEDDTAFEKHSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRSFSPRKTT---LMFVIRDKTRTPLENLE 512
            I GDG   VS ++  I    ++D G+ Y  V+I+GPQSSGKST+LN LFGT F  M+  +GR QTT+GI  A+    DP  L+ D+EG D R+RG+ D  FE+ SALFALA+S++++INMW  DIGR QA+N P+LKTVF+V ++ F  + TT   ++FVIRD T    E ++
Sbjct:    5 ITGDGAL-VSNLDEKITSSGIADAGVDYHTVAIIGPQSSGKSTILNLLFGTKFATMNEQRGRQQTTQGIHAAKSVN-DPI-LLFDVEGCDSRERGDSDALFERKSALFALALSEVLVINMWESDIGRYQASNIPMLKTVFEVNIQLFLAQNTTKSKILFVIRDSTAVNFEAIK 174          
BLAST of CK939234 vs. ExPASy Swiss-Prot
Match: SEY1_LACBS (Protein SEY1 OS=Laccaria bicolor (strain S238N-H82) GN=SEY1 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.563e-35
Identity = 85/161 (52.80%), Postives = 108/161 (67.08%), Query Frame = 3
Query:   63 LSDCGLSYAGVSIMGPQSSGKSTLLNHLFGTNFREMDAFKGRSQTTKGIWMARCAGIDPCTLIMDLEGTDGRKRGEDDTAFEKHSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRSFSPR-------KTTLMFVIRDKT-RTPLENLEPVL 521
            L D G SY  V++ G QS+GKSTLLN LFGT F  MD  + R QTTKGIWM  C G D   ++MD+EGTDGR+RGED   FE+ SALF+LA S+I+++N+W H +G  Q AN  LLKTVF+V +  F  +       +T L+FVIRD   +TPL NL+  L
Sbjct:   57 LRDAGFSYNIVAVFGSQSTGKSTLLNRLFGTTFDVMDETR-RQQTTKGIWM--CRGKDMGVMVMDVEGTDGRERGEDQD-FERKSALFSLASSEILIVNLWEHQVGLYQGANMGLLKTVFEVNLGLFGKKAQDGSNGRTLLLFVIRDHIGQTPLANLQATL 213          
BLAST of CK939234 vs. ExPASy Swiss-Prot
Match: SEY1_PODAN (Protein SEY1 OS=Podospora anserina GN=SEY1 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.667e-35
Identity = 88/186 (47.31%), Postives = 120/186 (64.52%), Query Frame = 3
Query:    3 IDGDGTFNVSGIEHFI*EVKLSDCGLSYAGVSIMGPQSSGKSTLLNHLFGTNFREMDAFKGRSQTTKGIWMAR----CAGIDPCT---LIMDLEGTDGRKRGEDDTAFEKHSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRSF-----SPRKTTLMFVIRDKT-RTPLENLEPVL 521
            ID D +FN + +  ++ E  +++ G +Y  +S+ G QS+GKSTLLNHLFGT F  M   + R QTTKGIW+++     A   P     L+MD+EGTDGR+RGED   FE+ SALFALA S+++++N+W H +G  Q AN  LLKTVF+V ++ F     S  ++ L FVIRD    TPLENL   L
Sbjct:   24 IDEDKSFNTN-LNDYLTETHVAESGFNYHLISVFGSQSTGKSTLLNHLFGTQFSVMSETE-RRQTTKGIWLSKNKRDSANGSPMADNILVMDVEGTDGRERGEDQD-FERKSALFALATSEVLIVNIWEHQVGLYQGANMGLLKTVFEVNLQLFLKDRQSQTRSLLFFVIRDFVGNTPLENLRTTL 206          
BLAST of CK939234 vs. ExPASy Swiss-Prot
Match: SEY1_COPC7 (Protein SEY1 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=SEY1 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.667e-35
Identity = 84/161 (52.17%), Postives = 107/161 (66.46%), Query Frame = 3
Query:   63 LSDCGLSYAGVSIMGPQSSGKSTLLNHLFGTNFREMDAFKGRSQTTKGIWMARCAGIDPCTLIMDLEGTDGRKRGEDDTAFEKHSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRSFSPR-------KTTLMFVIRDKT-RTPLENLEPVL 521
            L D G +Y  V++ G QS+GKSTLLN LFGT F  MD  + R QTTKGIWM  C G D   ++MD+EGTDGR+RGED   FE+ SALF+LA S+++++NMW H +G  Q AN  LLKTVF+V +  F  +       +T L+FVIRD    TPL NL+  L
Sbjct:   43 LRDSGFNYNLVAVFGSQSTGKSTLLNRLFGTTFDVMDETR-RQQTTKGIWM--CRGKDMSVMVMDVEGTDGRERGEDQD-FERKSALFSLASSEVLIVNMWEHQVGLYQGANMGLLKTVFEVNLGLFGKKANDGTSGRTLLLFVIRDHIGTTPLANLQATL 199          
BLAST of CK939234 vs. ExPASy Swiss-Prot
Match: SEY1_MALGO (Protein SEY1 OS=Malassezia globosa (strain ATCC 96807 / CBS 7966) GN=SEY1 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 4.548e-35
Identity = 87/183 (47.54%), Postives = 114/183 (62.30%), Query Frame = 3
Query:    3 IDGDGTFNVSGIEHFI*EVKLSDCGLSYAGVSIMGPQSSGKSTLLNHLFGTNFREMDAFKGRSQTTKGIWMARCAGIDPCTLIMDLEGTDGRKRGEDDTAFEKHSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRSF---------SPRKTTLMFVIRDKT-RTPLENLEPVL 521
            ID D  F+ +     + +  LSD G  Y   +++G QS+GKSTLLN LFGTNF  MD  + R QTTKGIW+  C G+D   L+MD+EGTDGR+RGED   FE+ SALF+LA ++ +++NMW + +G  Q AN  LLKTV  V +  F         +  KT L+FVIRD    TPL NLE  +
Sbjct:  113 IDEDQQFHGAEFNDHLKQWGLSDAGFGYDICAVLGSQSTGKSTLLNRLFGTNFDVMDE-RARQQTTKGIWL--CRGMDRNVLVMDVEGTDGRERGEDQD-FERKSALFSLATAECLIVNMWENQVGLFQGANMALLKTVLDVNLSLFQAGRARAGSAKEKTLLLFVIRDFIGTTPLANLEATI 291          
BLAST of CK939234 vs. ExPASy Swiss-Prot
Match: SEY1_YARLI (Protein SEY1 OS=Yarrowia lipolytica GN=SEY1 PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 7.758e-35
Identity = 92/190 (48.42%), Postives = 116/190 (61.05%), Query Frame = 3
Query:    3 IDGDGTFNVSGIEHFI*EVKLSDCGLSYAGVSIMGPQSSGKSTLLNHLFGTNFREMDAFKGRSQTTKGIWMARC----------AGIDPCT----LIMDLEGTDGRKRGEDDTAFEKHSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRSF--SPRKTTLMFVIRDKT-RTPLENLEPVL 521
            IDG+  FN   +  +  +V L   GL Y  V++ G QS+GKSTLLN LFGT F  M+    R QTTKGIWMAR           A    C+    L+MD+EGTDGR+RGED   FE+ SALFALA S+++++N+W H IG  Q AN  LLKTVF+V +  F  S  ++ +MFVIRD    TPL NL   L
Sbjct:  169 IDGNKEFNPD-VSSYFKKVHLDRAGLDYHVVAVFGSQSTGKSTLLNALFGTQFDVMNE-TARQQTTKGIWMARAQLEAPHSANSAHSQDCSDSGVLVMDVEGTDGRERGEDQD-FERKSALFALATSEVLIVNIWEHQIGLYQGANMGLLKTVFEVNLNLFATSQNRSLIMFVIRDHIGATPLANLSTTL 355          
BLAST of CK939234 vs. ExPASy Swiss-Prot
Match: SEY1_CHAGB (Protein SEY1 OS=Chaetomium globosum GN=SEY1 PE=3 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 7.758e-35
Identity = 89/188 (47.34%), Postives = 118/188 (62.77%), Query Frame = 3
Query:    3 IDGDGTFNVSGIEHFI*EVKLSDCGLSYAGVSIMGPQSSGKSTLLNHLFGTNFREMDAFKGRSQTTKGIWMARC----AGIDPCT-----LIMDLEGTDGRKRGEDDTAFEKHSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRSF-----SPRKTTLMFVIRDKT-RTPLENLEPVL 521
            ID D  FN + +  ++ E ++++ G +Y  +S+ G QS+GKSTLLNHLF T F  M     R QTTKGIWM++     A  D  T     L+MD+EGTDGR+RGED   FE+ SALFALA S+++++N+W H IG  Q AN  LLKTVF+V ++ F     S  ++ L FVIRD    TPL NL   L
Sbjct:   24 IDEDKAFNTN-LNDYLGETRVAEAGFNYHLISVFGSQSTGKSTLLNHLFKTEFSVMSE-SARRQTTKGIWMSKNKRAGANGDAATMADNILVMDVEGTDGRERGEDQD-FERKSALFALATSEVLIVNIWEHQIGLYQGANMGLLKTVFEVNLQLFLKDRQSQTRSLLFFVIRDHVGNTPLANLRDTL 208          
BLAST of CK939234 vs. ExPASy Swiss-Prot
Match: SEY1_ASPOR (Protein sey1 OS=Aspergillus oryzae GN=sey1 PE=3 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 1.728e-34
Identity = 84/183 (45.90%), Postives = 117/183 (63.93%), Query Frame = 3
Query:    3 IDGDGTFNVSGIEHFI*EVKLSDCGLSYAGVSIMGPQSSGKSTLLNHLFGTNFREMDAFKGRSQTTKGIWMAR----CAGIDPCTLIMDLEGTDGRKRGEDDTAFEKHSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRSFSPRKTT-----LMFVIRDKT-RTPLENLEPVL 521
            ID +  F    +  ++    ++  G +Y  +S+ G QS+GKSTLLNHLFGT+F  M   + R QTTKGIWM++     + +    L+MD+EGTDGR+RGED   FE+ SALFALA S+++++N+W H +G  Q AN  LLKTVF+V ++ F   K T     L FVIRD +  TPL+NL+  L
Sbjct:   27 IDENKEFKNPNLSQYLSLENVTPSGFNYHLISVFGSQSTGKSTLLNHLFGTHFSVMSELE-RRQTTKGIWMSKNKNESSSMASNILVMDVEGTDGRERGEDQD-FERKSALFALATSEVLIVNIWEHQVGLYQGANMGLLKTVFEVNLQLFLKDKNTTHRSLLFFVIRDYSGMTPLQNLQKTL 207          
BLAST of CK939234 vs. ExPASy Swiss-Prot
Match: SEY1_USTMA (Protein SEY1 OS=Ustilago maydis GN=SEY1 PE=3 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 2.257e-34
Identity = 85/183 (46.45%), Postives = 112/183 (61.20%), Query Frame = 3
Query:    3 IDGDGTFNVSGIEHFI*EVKLSDCGLSYAGVSIMGPQSSGKSTLLNHLFGTNFREMDAFKGRSQTTKGIWMARCAGIDPCTLIMDLEGTDGRKRGEDDTAFEKHSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRSF---------SPRKTTLMFVIRDKTR-TPLENLEPVL 521
            ID    FN +     +    L+D G  Y   +++G QS+GKSTLLN LFGTNF  M     R QTTKGIWM  C G+    L+MD+EGTDGR+RGED   FE+ SALF++A ++++++N+W H +G  Q AN  LLKTVF+V +  F         +  KT L+FVIRD    TPLENL   +
Sbjct:   88 IDEQQKFNSADFSPHLENWGLADAGFGYDLCAVLGSQSTGKSTLLNKLFGTNFDVMSE-SARQQTTKGIWM--CKGLKMNVLVMDVEGTDGRERGEDQD-FERKSALFSMASAEVLIVNLWEHQVGLYQGANMGLLKTVFEVNLGLFQASRAKTAGAKDKTLLLFVIRDHIGVTPLENLSATI 266          
The following BLAST results are available for this feature:
BLAST of CK939234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
SEY1_DICDI2.849e-3752.56Protein SEY1 homolog OS=Dictyostelium discoideum G... [more]
SEY12_TRIVA3.721e-3749.71Protein SEY1 homolog 2 OS=Trichomonas vaginalis GN... [more]
SEY1_LACBS1.563e-3552.80Protein SEY1 OS=Laccaria bicolor (strain S238N-H82... [more]
SEY1_PODAN2.667e-3547.31Protein SEY1 OS=Podospora anserina GN=SEY1 PE=3 SV... [more]
SEY1_COPC72.667e-3552.17Protein SEY1 OS=Coprinopsis cinerea (strain Okayam... [more]
SEY1_MALGO4.548e-3547.54Protein SEY1 OS=Malassezia globosa (strain ATCC 96... [more]
SEY1_YARLI7.758e-3548.42Protein SEY1 OS=Yarrowia lipolytica GN=SEY1 PE=3 S... [more]
SEY1_CHAGB7.758e-3547.34Protein SEY1 OS=Chaetomium globosum GN=SEY1 PE=3 S... [more]
SEY1_ASPOR1.728e-3445.90Protein sey1 OS=Aspergillus oryzae GN=sey1 PE=3 SV... [more]
SEY1_USTMA2.257e-3446.45Protein SEY1 OS=Ustilago maydis GN=SEY1 PE=3 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCGF1004432_E06 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650003_IF_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939234 ID=CK939234; Name=CK939234; organism=Citrus sinensis; type=EST; length=521bp
TTATTGATGGGGATGGGACGTTCAATGTTTCTGGAATTGAGCATTTTATC
TAGGAGGTAAAATTGAGCGACTGTGGGCTGTCATATGCCGGTGTCTCCAT
AATGGGACCACAAAGTAGCGGGAAGAGCACGCTATTGAATCATTTGTTTG
GTACCAACTTCAGGGAAATGGATGCATTTAAAGGAAGGTCTCAAACCACA
AAAGGTATTTGGATGGCAAGATGTGCAGGCATTGATCCGTGTACTCTTAT
AATGGACTTGGAGGGAACTGATGGTAGAAAACGAGGCGAGGATGATACTG
CCTTCGAGAAGCACAGTGCCCTCTTTGCCCTTGCTGTTTCNGATATAGTT
CTAATAAATATGTGGTGTCACGACATTGGCCGCGAGCAAGCTGCAAATAA
ACCTCTCTTAAAAACTGTATTCCAGGTCATGATGCGCTCGTTCAGTCCTC
GCAAAACAACGTTGATGTTTGTCATACGTGATAAAACTCGGACACCATTG
GAAAATTTGGAACCAGTTCTA
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