CX675638
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675638 vs. ExPASy Swiss-Prot
Match: SYM_ARATH (Probable methionyl-tRNA synthetase OS=Arabidopsis thaliana GN=At4g13780 PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.039e-49 Identity = 94/122 (77.05%), Postives = 105/122 (86.07%), Query Frame = -1 Query: 333 GLVKHIPLAEMQERMVCVLCNLKPVAVRGIKSHAMVLCASTSDNTKVELVEPPKSAKIGERVAFPGFEGEPDDVLNPKKKVWETVQVDLHTNTELVACYKDIPFTTSAGICTVSSIQSGSIR 698 GLVK+IPL EMQ RMVCVLCNLKP +R I S AMVL AS+SD +KVELVEPPK+A IGERV FPGFEGEPDDVLNPKKKVWET+ VDL+T LVACYKD+PFTTSAG+C VSSI +G+IR Sbjct: 676 GLVKYIPLEEMQNRMVCVLCNLKPAKMRDIVSQAMVLAASSSDGSKVELVEPPKTANIGERVTFPGFEGEPDDVLNPKKKVWETLLVDLNTKENLVACYKDVPFTTSAGVCKVSSISNGTIR 797
BLAST of CX675638 vs. ExPASy Swiss-Prot
Match: SYM_ORYSJ (Probable methionyl-tRNA synthetase OS=Oryza sativa subsp. japonica GN=Os06g0508700 PE=2 SV=2) HSP 1 Score: 184.111 bits (466), Expect = 6.140e-46 Identity = 88/122 (72.13%), Postives = 98/122 (80.33%), Query Frame = -1 Query: 333 GLVKHIPLAEMQERMVCVLCNLKPVAVRGIKSHAMVLCASTSDNTKVELVEPPKSAKIGERVAFPGFEGEPDDVLNPKKKVWETVQVDLHTNTELVACYKDIPFTTSAGICTVSSIQSGSIR 698 GLVK IPL EMQ R VCVLCNLKPVA+RGIKSHAMVL AS D+TKVELVEPP+SA +GERV F G+ GEP+ LN K K WE + DLH+N ELVACYKD+PFTTSAG+C V SI SG IR Sbjct: 680 GLVKFIPLEEMQNRKVCVLCNLKPVAMRGIKSHAMVLAASNEDHTKVELVEPPESAAVGERVTFAGYSGEPEASLNAKSKTWEKLSADLHSNGELVACYKDVPFTTSAGVCKVKSIASGEIR 801
BLAST of CX675638 vs. ExPASy Swiss-Prot
Match: AIMP1_HUMAN (Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 OS=Homo sapiens GN=AIMP1 PE=1 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 2.504e-31 Identity = 62/123 (50.41%), Postives = 84/123 (68.29%), Query Frame = -1 Query: 333 GLVKHIPLAEMQERMVCVLCNLKPVAVRGIKSHAMVLCASTSDNTKVELVEPPKSAKIGERVAFPGFEGEPDDVLNPKKKVWETVQVDLHTNTELVACYKDIPFTTSA-GICTVSSIQSGSIR 698 GLV H+PL +MQ RMV +LCNLKP +RG+ S AMV+CAS+ + K+E++ PP + G+R+ F F GEPD LNPKKK+WE +Q DLHTN E VA YK +PF G+C ++ + I+ Sbjct: 192 GLVNHVPLEQMQNRMVILLCNLKPAKMRGVLSQAMVMCASSPE--KIEILAPPNGSVPGDRITFDAFPGEPDKELNPKKKIWEQIQPDLHTNDECVATYKGVPFEVKGKGVCRAQTMSNSGIK 312
BLAST of CX675638 vs. ExPASy Swiss-Prot
Match: AIMP1_MOUSE (Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 OS=Mus musculus GN=Aimp1 PE=1 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 5.579e-31 Identity = 63/123 (51.22%), Postives = 83/123 (67.48%), Query Frame = -1 Query: 333 GLVKHIPLAEMQERMVCVLCNLKPVAVRGIKSHAMVLCASTSDNTKVELVEPPKSAKIGERVAFPGFEGEPDDVLNPKKKVWETVQVDLHTNTELVACYKDIPFTTSA-GICTVSSIQSGSIR 698 GLV H+PL +MQ RMV +LCNLKP +RG+ S AMV+CAS+ + KVE++ PP + G+R+ F F GEPD LNPKKK+WE +Q DLHTN E VA YK PF G+C ++ + I+ Sbjct: 190 GLVNHVPLEQMQNRMVVLLCNLKPAKMRGVLSQAMVMCASSPE--KVEILAPPNGSVPGDRITFDAFPGEPDKELNPKKKIWEQIQPDLHTNAECVATYKGAPFEVKGKGVCRAQTMANSGIK 310
BLAST of CX675638 vs. ExPASy Swiss-Prot
Match: AIMP1_CRIGR (Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 OS=Cricetulus griseus GN=AIMP1 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.287e-31 Identity = 64/123 (52.03%), Postives = 83/123 (67.48%), Query Frame = -1 Query: 333 GLVKHIPLAEMQERMVCVLCNLKPVAVRGIKSHAMVLCASTSDNTKVELVEPPKSAKIGERVAFPGFEGEPDDVLNPKKKVWETVQVDLHTNTELVACYKDIPFTTSA-GICTVSSIQSGSIR 698 GLV H+PL +MQ RMV +LCNLKP +RGI S AMV+CAS+ + KVE++ PP + G+R+ F F GEPD LNPKKK+WE +Q DLHTN E VA YK PF G+C ++ + I+ Sbjct: 239 GLVNHVPLDQMQNRMVVLLCNLKPAKMRGILSQAMVMCASSPE--KVEILAPPNGSVPGDRITFDAFPGEPDKELNPKKKIWEQIQPDLHTNAECVATYKGSPFEVKGKGVCRAQTMANSGIK 359
BLAST of CX675638 vs. ExPASy Swiss-Prot
Match: G4P1_YEAST (GU4 nucleic-binding protein 1 OS=Saccharomyces cerevisiae GN=ARC1 PE=1 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 1.738e-24 Identity = 61/102 (59.80%), Postives = 69/102 (67.65%), Query Frame = -1 Query: 396 GLVKHIPLAEMQERMVCVLCNLKPVAVRGIKSHAMVLCASTSDNTKVELVEPPKSAKIGERVAFPGFEGE-PDDVLNPKKKVWETVQVDLHTNTELVACYKD 698 GLVKH PL MQER V V+CNLKPV +RGIKS AMVLC S D KVE VEPPK +K G++V F GF E P LNPKKK+WE +Q TN L +KD Sbjct: 247 GLVKHFPLDAMQERYVVVVCNLKPVNMRGIKSTAMVLCGSNDD--KVEFVEPPKDSKAGDKVFFEGFGDEAPMKQLNPKKKIWEHLQPHFTTNDGLEVIFKD 346
BLAST of CX675638 vs. ExPASy Swiss-Prot
Match: YLF4_SCHPO (Uncharacterized tRNA-binding protein C30C2.04 OS=Schizosaccharomyces pombe GN=SPAC30C2.04 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.270e-24 Identity = 56/130 (43.08%), Postives = 83/130 (63.85%), Query Frame = -1 Query: 336 GLVKHIPLAEMQERMVCVLCNLKPVAVRGIKSHAMVLCASTSDNTKVELVEPPKSAKIGERVAFPGFE-GEPDDVLNPKKKVWETVQVDLHTNTELVACYKD--------IPFTTSAGICTVSSIQSGSI 698 GLVK+IPL +MQ+R V V+ NLKPV +R +KS AMV CAS+ D + VE V PP++A+IG+R+ F GF+ EP+ LNPK+K+WE +Q + +L+ YKD + G C ++ +G++ Sbjct: 320 GLVKYIPLEQMQQRKVIVVANLKPVNMRSVKSQAMVFCASSPDKSVVEFVLPPENAEIGDRLTFEGFDTEEPEAQLNPKRKIWEAIQPGFTSGEDLICGYKDESGLHRLFVKGKKDLGFCKAQTVVNGTL 449
BLAST of CX675638 vs. ExPASy Swiss-Prot
Match: SYYC_BOVIN (Tyrosyl-tRNA synthetase, cytoplasmic OS=Bos taurus GN=YARS PE=2 SV=4) HSP 1 Score: 110.153 bits (274), Expect = 1.127e-23 Identity = 57/123 (46.34%), Postives = 80/123 (65.04%), Query Frame = -1 Query: 336 GLVKHIPLAEMQERMVCVLCNLKPVAVRGIKSHAMVLCASTSD-NTKVELVEPPKSAKIGERVAFPGFE-GEPDDVLNPKKKVWETVQVDLHTNTELVACYKDIPFTTSAGICTVSSIQSGSI 698 GLV+ +P E+Q+R+V VLCNLKP +RG+KS M+LCAS N KVE ++PP + GERV G+E G+PD+ L PKKKV+E +Q D + E +A +K F T G + S++ G+I Sbjct: 405 GLVQFVPKEELQDRLVVVLCNLKPQKMRGVKSQGMLLCASVEGVNRKVEPLDPPAGSAPGERVFVKGYEKGQPDEELKPKKKVFEKLQADFKISDEYIAQWKQTNFMTKMGSVSCKSLKGGNI 527
BLAST of CX675638 vs. ExPASy Swiss-Prot
Match: SYMC_CAEEL (Methionyl-tRNA synthetase, cytoplasmic OS=Caenorhabditis elegans GN=mrs-1 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.279e-23 Identity = 54/103 (52.43%), Postives = 71/103 (68.93%), Query Frame = -1 Query: 390 GLVKHIPLAEMQERMVCVLCNLKPVAVRGIKSHAMVLCASTSDNTKVELVEPPKSAKIGERVAFPGFEGEPDDVLNPKKKVWETVQVDLHTNTELVACYKDIP 698 GLV+H+PL +MQ R+V VLCNLKP +RG++S AMV+CAS+ D KVE++E P +K G V P + PD+ LNPKKK+WETV DL + E A +K P Sbjct: 797 GLVRHVPLDQMQNRLVVVLCNLKPAKMRGVESRAMVMCASSPD--KVEIMEVPADSKPGTPVVCPPYTHRPDEQLNPKKKIWETVAEDLKVSAEGFAEWKGQP 897
BLAST of CX675638 vs. ExPASy Swiss-Prot
Match: SYYC_DANRE (Tyrosyl-tRNA synthetase, cytoplasmic OS=Danio rerio GN=yars PE=2 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 9.539e-23 Identity = 58/123 (47.15%), Postives = 83/123 (67.48%), Query Frame = -1 Query: 336 GLVKHIPLAEMQERMVCVLCNLKPVAVRGIKSHAMVLCAS-TSDNTKVELVEPPKSAKIGERVAFPGFE-GEPDDVLNPKKKVWETVQVDLHTNTELVACYKDIPFTTSAGICTVSSIQSGSI 698 GLV +I ++Q+R+V +LCNLKP +RGI+S AMVLCAS + KVE ++PP+ + G+RV G+E G+PDD L PKKKV+E +QVDL + E VA +K+ T G T +++ G+I Sbjct: 406 GLVAYITEEQLQDRLVVLLCNLKPQKMRGIESQAMVLCASIEGEPRKVEPLDPPEGSAAGDRVYVEGYESGKPDDELKPKKKVFEKLQVDLKISGEFVAQWKEQNLMTKLGRITCKTLKGGNI 528 The following BLAST results are available for this feature:
BLAST of CX675638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675638 ID=CX675638; Name=CX675638; organism=Citrus sinensis; type=EST; length=698bpback to top |