CX675637

Overview
NameCX675637
Unique NameCX675637
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length563
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6872 contig Csv1_Contig6872:107..669. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX675637 vs. ExPASy Swiss-Prot
Match: YJBI_BACSU (Hemoglobin-like protein yjbI OS=Bacillus subtilis GN=yjbI PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.886e-11
Identity = 40/111 (36.04%), Postives = 57/111 (51.35%), Query Frame = 2 
Query:   59 FRKLGLQTFINLSTNFYTRVYDDEEEWFRSIFANSNKEEAIQNQYEFFVQRMGGPPLYSQRKGHPALIGRHRPFPVTHHAAERWLHHMQIALDRTPEIDADSEIRMMNFFR 391
            +  +G +    L   FY RV        + IF  S+  E  + Q +F  Q +GGPPLY++  GHP L  RH PFP+T+  A+ WL  M+ A+D    +  + EIR   F R
Sbjct:    9 YEAIGEELLSQLVDTFYERVAS--HPLLKPIFP-SDLTETARKQKQFLTQYLGGPPLYTEEHGHPMLRARHLPFPITNERADAWLSCMKDAMD---HVGLEGEIREFLFGR 113
The following BLAST results are available for this feature:
BLAST of CX675637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YJBI_BACSU1.886e-1136.04Hemoglobin-like protein yjbI OS=Bacillus subtilis ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_63F11_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-63F11-K21-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675637 ID=CX675637; Name=CX675637; organism=Citrus sinensis; type=EST; length=563bp
CTCCGAGTGGAGCGGAGTTGACCCAGCGGACGCGTTCGCCATTGACGAAA
CCAACTTGTTTCGGAAGCTTGGCCTTCAAACTTTCATCAATCTCTCCACC
AACTTCTATACCAGGGTTTATGACGACGAGGAAGAGTGGTTTAGGTCAAT
TTTTGCAAATTCGAATAAAGAAGAAGCAATTCAGAACCAATATGAGTTTT
TTGTGCAGAGAATGGGAGGGCCTCCTCTGTATTCTCAGAGGAAAGGCCAT
CCTGCATTAATTGGACGTCATCGACCATTCCCAGTAACACATCATGCTGC
AGAGAGATGGTTACATCATATGCAGATTGCACTAGACCGTACCCCAGAAA
TTGATGCTGACTCAGAAATCAGAATGATGAATTTTTTCAGACACACTGCA
TTCTTTCTTGTGGCTGGAGATGAGTTGAAAAATCACAATCATCAACCTAG
ATGCAAGGATGAGACTAGCANACCAGCTGCAAAGTAACAACAATATTAAC
AGAGGGGTATCATCATTCATTGAACCCTCTAAATAAAGCACTGGTGTAAA
ACCAAACTTTCTC
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