CK939225

Overview
NameCK939225
Unique NameCK939225
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939225 vs. ExPASy Swiss-Prot
Match: RAP21_ARATH (Ethylene-responsive transcription factor RAP2-1 OS=Arabidopsis thaliana GN=RAP2-1 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.088e-35
Identity = 80/132 (60.61%), Postives = 91/132 (68.94%), Query Frame = 2
Query:  215 YKGIRMRKWRKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPELIFQEDD------LRDVSAASIRKKATEVGAKVDALQAALHAAXXXXXXXXXXXXXXIRLSEKPDLNKFPESSD 592
            Y+GIR RKW KWVAEIREPNKRSR+WLGSYTT IAAARAYD AVFYLRGPSARLNFP+L+ QE+D        D+ AA IR+KA EVGA+VDAL A+   +                   KPDLN+ PES D
Sbjct:   31 YRGIRRRKWGKWVAEIREPNKRSRLWLGSYTTDIAAARAYDVAVFYLRGPSARLNFPDLLLQEEDHLSAATTADMPAALIREKAAEVGARVDALLASAAPSMAHSTPPVI----------KPDLNQIPESGD 152          
BLAST of CK939225 vs. ExPASy Swiss-Prot
Match: ERF10_ARATH (Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana GN=ERF010 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.614e-34
Identity = 74/93 (79.57%), Postives = 82/93 (88.17%), Query Frame = 2
Query:  215 YKGIRMRKWRKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPELIFQED-DLRDVSAASIRKKATEVGAKVDALQAAL 490
            YKGIRMRKW KWVAEIREPNKRSR+WLGSY+TP AAARAYDTAVFYLRGP+ARLNFPEL+  E     D+SAA+IRKKATEVGA+VDAL  A+
Sbjct:   21 YKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTARLNFPELLPGEKFSDEDMSAATIRKKATEVGAQVDALGTAV 113          
BLAST of CK939225 vs. ExPASy Swiss-Prot
Match: ERF11_ARATH (Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana GN=ERF011 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.823e-34
Identity = 78/128 (60.94%), Postives = 90/128 (70.31%), Query Frame = 2
Query:  215 YKGIRMRKWRKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPELIFQEDDLRDVSAASIRKKATEVGAKVDALQAALHAAXXXXXXXXXXXXXXIRLSEKPDLNKFPESSDED 598
            +KGIRMRKW KWVAEIREPNKRSR+WLGSY+TP AAARAYDTAVFYLRGP+A LNFPEL+       D+SAA+IRKKATEVGA+VDA+ A +                   L E  DLNK P+  + D
Sbjct:   21 FKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTATLNFPELL-PCTSAEDMSAATIRKKATEVGAQVDAIGATVVQNNKRRRVFSQKRDFGGGLLELVDLNKLPDPENLD 147          
BLAST of CK939225 vs. ExPASy Swiss-Prot
Match: ERF08_ARATH (Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana GN=ERF008 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.694e-33
Identity = 82/139 (58.99%), Postives = 90/139 (64.75%), Query Frame = 2
Query:  215 YKGIRMRKWRKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPELIFQEDDLR------DVSAASIRKKATEVGAKVDALQAALHAAXXXXXXXXXXXXXXIRLS-----EKPDLNKFPESSDED 598
            YKGIRMRKW KWVAEIREPNKRSRIWLGSY TP AAARAYDTAVFYLRGPSARLNFPEL+             D+SAA IR+KA EVGA+VDAL A +                  R S     E+ DLNK P+  + D
Sbjct:   28 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLRGPSARLNFPELLAGLTVSNGGGRGGDLSAAYIRRKAAEVGAQVDALGATVVVNTGGENRGDYEKIENCRKSGNGSLERVDLNKLPDPENSD 166          
BLAST of CK939225 vs. ExPASy Swiss-Prot
Match: RA210_ARATH (Ethylene-responsive transcription factor RAP2-10 OS=Arabidopsis thaliana GN=RAP2-10 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.098e-32
Identity = 74/101 (73.27%), Postives = 81/101 (80.20%), Query Frame = 2
Query:  215 YKGIRMRKWRKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPELIF----------QEDDLRDVSAASIRKKATEVGAKVDALQAA 487
            YKGIRMRKW KWVAEIREPNKRSRIWLGSY+TP AAARAYDTAVFYLRGPSARLNFPEL+             +   D+SAA IR+KA EVGA+VDAL+AA
Sbjct:   30 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPEAAARAYDTAVFYLRGPSARLNFPELLAGVTVTGGGGGGVNGGGDMSAAYIRRKAAEVGAQVDALEAA 130          
BLAST of CK939225 vs. ExPASy Swiss-Prot
Match: RAP29_ARATH (Ethylene-responsive transcription factor RAP2-9 OS=Arabidopsis thaliana GN=RAP2-9 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.450e-32
Identity = 76/129 (58.91%), Postives = 86/129 (66.67%), Query Frame = 2
Query:  215 YKGIRMRKWRKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPELIFQEDD-----LRDVSAASIRKKATEVGAKVDALQAALHAAXXXXXXXXXXXXXXIRLSEKPDLNKFPES 586
            YKGIRMRKW KWVAEIREPNKRSRIWLGSY T +AAARAYDTAVFYLRGPSARLNFPE +F++ +       D+S   IRKKA EVGA+VDA                       R+ E  D+NK PE+
Sbjct:   36 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYKTAVAAARAYDTAVFYLRGPSARLNFPEEVFKDGNGGEGLGGDMSPTLIRKKAAEVGARVDA-----------------ELRLENRMVENLDMNKLPEA 147          
BLAST of CK939225 vs. ExPASy Swiss-Prot
Match: ERF21_ARATH (Ethylene-responsive transcription factor ERF021 OS=Arabidopsis thaliana GN=ERF021 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.430e-18
Identity = 45/80 (56.25%), Postives = 53/80 (66.25%), Query Frame = 2
Query:  215 YKGIRMRKWRKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPELIFQEDDLRDVSAASIRKKATE 454
            Y+G+R RKW KWV+EIREP  ++RIWLGS+ TP  AA AYD A F+ RG  ARLNFPEL        D S+ SIR    E
Sbjct:   24 YRGVRKRKWGKWVSEIREPGTKNRIWLGSFETPEMAATAYDVAAFHFRGREARLNFPELASSLPRPADSSSDSIRMAVHE 103          
BLAST of CK939225 vs. ExPASy Swiss-Prot
Match: ERF13_ARATH (Ethylene-responsive transcription factor ERF013 OS=Arabidopsis thaliana GN=ERF013 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.702e-17
Identity = 44/86 (51.16%), Postives = 57/86 (66.28%), Query Frame = 2
Query:  215 YKGIRMRKWRKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPEL------IFQEDDLRDVSAASIRKKATE 454
            YKG+RMR W  WV EIR PN+++RIWLGSY+T  AAARAYD A+  L+GP A LNFP +      +   D+   +S  SI+K A +
Sbjct:   43 YKGVRMRSWGSWVTEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGPKANLNFPNITTTSPFLMNIDEKTLLSPKSIQKVAAQ 128          
BLAST of CK939225 vs. ExPASy Swiss-Prot
Match: ERF39_ARATH (Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana GN=ERF039 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.792e-17
Identity = 41/85 (48.24%), Postives = 58/85 (68.24%), Query Frame = 2
Query:  215 YKGIRMRKWRKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPELIFQ-----EDDLRDVSAASIRKKATE 454
            ++G+RMR+W KWV+EIREP K+SRIWLG+++TP  AARA+D A   ++G SA LNFPEL +        D +D+  A+    A +
Sbjct:   40 FRGVRMRQWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQEAAAAAAAVD 124          
BLAST of CK939225 vs. ExPASy Swiss-Prot
Match: ERF17_ARATH (Ethylene-responsive transcription factor ERF017 OS=Arabidopsis thaliana GN=ERF017 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.792e-17
Identity = 43/78 (55.13%), Postives = 55/78 (70.51%), Query Frame = 2
Query:  215 YKGIRMRKWRKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPELIFQEDDLRDVSAASIRKKA 448
            YKG+R RKW KWV+EIR PN R RIWLGSY TP  AARA+D A++ LRG +A+ NFP+        R++S + IR+ A
Sbjct:   12 YKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTPEKAARAFDAALYCLRGNNAKFNFPDNPPVISGGRNLSRSEIREAA 89          
The following BLAST results are available for this feature:
BLAST of CK939225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
RAP21_ARATH3.088e-3560.61Ethylene-responsive transcription factor RAP2-1 OS... [more]
ERF10_ARATH2.614e-3479.57Ethylene-responsive transcription factor ERF010 OS... [more]
ERF11_ARATH5.823e-3460.94Ethylene-responsive transcription factor ERF011 OS... [more]
ERF08_ARATH1.694e-3358.99Ethylene-responsive transcription factor ERF008 OS... [more]
RA210_ARATH1.098e-3273.27Ethylene-responsive transcription factor RAP2-10 O... [more]
RAP29_ARATH5.450e-3258.91Ethylene-responsive transcription factor RAP2-9 OS... [more]
ERF21_ARATH3.430e-1856.25Ethylene-responsive transcription factor ERF021 OS... [more]
ERF13_ARATH1.702e-1751.16Ethylene-responsive transcription factor ERF013 OS... [more]
ERF39_ARATH3.792e-1748.24Ethylene-responsive transcription factor ERF039 OS... [more]
ERF17_ARATH3.792e-1755.13Ethylene-responsive transcription factor ERF017 OS... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004432_F06 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650003_IF_F06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939225 ID=CK939225; Name=CK939225; organism=Citrus sinensis; type=EST; length=861bp
GGGGGGCAATAAAAGTGGAGTCGCCTTAATTATTTTTGGGTTGGGCATCG
GTATGTGTCCCTCAGAACTCACAACAAGAAGAAAACTTTGATTAATTATC
TACGAAAACGACATGGAAGGAGGCGGGTGCTGCAGCACTTCGACTTCAAC
GAAAAGCCCAGAGAAGCGGAAGCCAAGGCAGCAGCGGCAACACCAACAGC
AGCAGGAAAAGCCGTACAAGGGGATAAGGATGAGGAAGTGGAGGAAGTGG
GTCGCTGAAATTAGAGAGCCTAACAAGAGATCCAGAATCTGGCTTGGTTC
TTACACCACGCCTATAGCCGCCGCACGTGCCTACGACACGGCCGTCTTCT
ATCTCCGGGGCCCTTCCGCTCGTCTTAACTTCCCCGAATTGATTTTCCAA
GAAGACGATCTTCGAGACGTTTCTGCCGCTTCAATACGCAAGAAAGCTAC
CGAAGTTGGCGCTAAGGTCGACGCTTTACAAGCTGCTCTCCATGCTGCTA
ATTCAGAATCTGAATCCAATTCCAATTCCAATTTCAATTCTATTCGATTG
TCCGAGAAGCCTGATTTAAACAAGTTTCCAGAGAGTTCTGATGAAGATTG
ATAACACAAAATACTTGCAAGCTCACAATTACCTACCCTAGTCTTTCCAC
GTTTACGTACTGTTTTATTCCCATCATCAGTTTCAACTTTGAAAACGTAC
GGAATCACAAGGATTCTGTTTCATATATTTATATTATATATAGGTCGATC
TTCTTAATTAGTATGTAACACGTACGACTGTTATTTATTTAGTTGATTAA
TTAGTTATGGTCTTAATTTTTGAGTTAACTAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAA
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