CK939216
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939216 vs. ExPASy Swiss-Prot
Match: RL36_DAUCA (60S ribosomal protein L36 OS=Daucus carota GN=RPL36 PE=3 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 2.104e-29 Identity = 61/67 (91.04%), Postives = 63/67 (94.03%), Query Frame = 3 Query: 48 MAPKQPNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVG 248 MAPKQPNTGLFVGLNKGHIVTKKEL PRP+DRKGKTSKR HFVR +IREVAGF PYEKRITELLKVG Sbjct: 1 MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRTHFVRNLIREVAGFXPYEKRITELLKVG 67
BLAST of CK939216 vs. ExPASy Swiss-Prot
Match: RL362_ARATH (60S ribosomal protein L36-2 OS=Arabidopsis thaliana GN=RPL36B PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.236e-21 Identity = 49/67 (73.13%), Postives = 55/67 (82.09%), Query Frame = 3 Query: 48 MAPKQPNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVG 248 M Q TGLFVGLNKGH+VT++EL PRP RKGKTSKR F+R +I+EVAG APYEKRITELLKVG Sbjct: 1 MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVG 67
BLAST of CK939216 vs. ExPASy Swiss-Prot
Match: RL363_ARATH (60S ribosomal protein L36-3 OS=Arabidopsis thaliana GN=RPL36C PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.615e-21 Identity = 48/60 (80.00%), Postives = 54/60 (90.00%), Query Frame = 3 Query: 69 TGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVG 248 TGLFVGLNKGH+VTK+E PPRP +RKGKTSKR F+R +I+EVAG APYEKRITELLKVG Sbjct: 4 TGLFVGLNKGHVVTKREQPPRPNNRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVG 63
BLAST of CK939216 vs. ExPASy Swiss-Prot
Match: RL361_ARATH (60S ribosomal protein L36-1 OS=Arabidopsis thaliana GN=RPL36A PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.109e-21 Identity = 48/60 (80.00%), Postives = 53/60 (88.33%), Query Frame = 3 Query: 69 TGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVG 248 TGLFVGLNKGH+VT++EL PRP RKGKTSKR F+R +IREVAG APYEKRITELLKVG Sbjct: 8 TGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKVG 67
BLAST of CK939216 vs. ExPASy Swiss-Prot
Match: RL36A_SCHPO (60S ribosomal protein L36-A OS=Schizosaccharomyces pombe GN=rpl36a PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 4.550e-16 Identity = 36/57 (63.16%), Postives = 49/57 (85.96%), Query Frame = 3 Query: 72 GLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLK 242 GL VGLNKG ++TK++LP RP+ RKG+ SKR FVR+++REVAGFAPYE+R+ EL++ Sbjct: 4 GLVVGLNKGKVLTKRQLPERPSRRKGQLSKRTSFVRSIVREVAGFAPYERRVMELIR 60
BLAST of CK939216 vs. ExPASy Swiss-Prot
Match: RL36B_SCHPO (60S ribosomal protein L36-B OS=Schizosaccharomyces pombe GN=rpl36b PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.949e-15 Identity = 36/57 (63.16%), Postives = 47/57 (82.46%), Query Frame = 3 Query: 72 GLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLK 242 GL VGLNKG +TK++LP RP+ RKG SKR FVR+++REVAGFAPYE+R+ EL++ Sbjct: 4 GLVVGLNKGKTLTKRQLPERPSRRKGHLSKRTAFVRSIVREVAGFAPYERRVMELIR 60
BLAST of CK939216 vs. ExPASy Swiss-Prot
Match: RL36_ENTCP (60S ribosomal protein L36 OS=Enteromorpha compressa GN=RL36 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.912e-14 Identity = 39/56 (69.64%), Postives = 45/56 (80.36%), Query Frame = 3 Query: 81 VGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVG 248 VGLNKGH VTKK PRP+ RKG S+RV VR V+REVAG+APYE+R+ ELLKVG Sbjct: 6 VGLNKGHQVTKKAGTPRPSRRKGFLSQRVKKVRAVVREVAGWAPYERRVMELLKVG 61
BLAST of CK939216 vs. ExPASy Swiss-Prot
Match: RL36_IXOSC (60S ribosomal protein L36 OS=Ixodes scapularis GN=RpL36 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.114e-13 Identity = 37/57 (64.91%), Postives = 41/57 (71.93%), Query Frame = 3 Query: 75 LFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKV 245 L VGL KGH VTK E PRP+ RKG SK FVR +IREV GFAP+E+R ELLKV Sbjct: 7 LAVGLGKGHKVTKNEYKPRPSRRKGALSKHTRFVRDLIREVCGFAPFERRAMELLKV 63
BLAST of CK939216 vs. ExPASy Swiss-Prot
Match: RL36_TRIHM (60S ribosomal protein L36 OS=Trichoderma hamatum GN=rpl36 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.370e-12 Identity = 37/66 (56.06%), Postives = 46/66 (69.70%), Query Frame = 3 Query: 48 MAPKQP-NTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLK 242 MA + P TGL VGLNKGH T + + PR + KG SKR FVR V++EVAG APYE+R+ ELL+ Sbjct: 1 MAKEAPAKTGLAVGLNKGHKTTARVVKPRVSRTKGHLSKRTAFVREVVKEVAGLAPYERRVIELLR 66
BLAST of CK939216 vs. ExPASy Swiss-Prot
Match: RL36_XENTR (60S ribosomal protein L36 OS=Xenopus tropicalis GN=rpl36 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.800e-12 Identity = 34/55 (61.82%), Postives = 39/55 (70.91%), Query Frame = 3 Query: 81 VGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKV 245 VGLNKGH VTK PR R+G+ +K FVR +IREV GFAPYE+R ELLKV Sbjct: 9 VGLNKGHRVTKNVTKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKV 63 The following BLAST results are available for this feature:
BLAST of CK939216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939216 ID=CK939216; Name=CK939216; organism=Citrus sinensis; type=EST; length=303bpback to top |