CK939209
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939209 vs. ExPASy Swiss-Prot
Match: RAB1A_RAT (Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3) HSP 1 Score: 119.398 bits (298), Expect = 2.728e-26 Identity = 58/88 (65.91%), Postives = 70/88 (79.55%), Query Frame = 3 Query: 204 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIM 464 S+ E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWDTAGQERFRT+TSSYYRGA GII+ Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIV 89
BLAST of CK939209 vs. ExPASy Swiss-Prot
Match: RAB1A_PIG (Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3) HSP 1 Score: 119.398 bits (298), Expect = 2.728e-26 Identity = 58/88 (65.91%), Postives = 70/88 (79.55%), Query Frame = 3 Query: 204 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIM 464 S+ E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWDTAGQERFRT+TSSYYRGA GII+ Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIV 89
BLAST of CK939209 vs. ExPASy Swiss-Prot
Match: RAB1A_MOUSE (Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3) HSP 1 Score: 119.398 bits (298), Expect = 2.728e-26 Identity = 58/88 (65.91%), Postives = 70/88 (79.55%), Query Frame = 3 Query: 204 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIM 464 S+ E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWDTAGQERFRT+TSSYYRGA GII+ Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIV 89
BLAST of CK939209 vs. ExPASy Swiss-Prot
Match: RAB1A_HUMAN (Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3) HSP 1 Score: 119.398 bits (298), Expect = 2.728e-26 Identity = 58/88 (65.91%), Postives = 70/88 (79.55%), Query Frame = 3 Query: 204 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIM 464 S+ E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWDTAGQERFRT+TSSYYRGA GII+ Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIV 89
BLAST of CK939209 vs. ExPASy Swiss-Prot
Match: RAB1A_CANFA (Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3) HSP 1 Score: 119.398 bits (298), Expect = 2.728e-26 Identity = 58/88 (65.91%), Postives = 70/88 (79.55%), Query Frame = 3 Query: 204 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIM 464 S+ E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWDTAGQERFRT+TSSYYRGA GII+ Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIV 89
BLAST of CK939209 vs. ExPASy Swiss-Prot
Match: YPTV3_VOLCA (GTP-binding protein yptV3 OS=Volvox carteri GN=YPTV3 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 6.077e-26 Identity = 59/80 (73.75%), Postives = 66/80 (82.50%), Query Frame = 3 Query: 225 DYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGII 461 DY FK+L++GDSGVGKS +L FTS FEE + TIGVDFKVKY+ GK+ KL IWDTAGQERFRTLTSSYYRGAQGII Sbjct: 7 DYTFKVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLTADGKRCKLTIWDTAGQERFRTLTSSYYRGAQGII 86 HSP 2 Score: 85.8853 bits (211), Expect = 3.361e-16 Identity = 40/81 (49.38%), Postives = 56/81 (69.14%), Query Frame = 1 Query: 640 LIQIYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREXGCPFIECSAKTRVNVQQCF 882 +I +YDVTRRDTF +L W +E D+YST + IK++V NKVD ++R V+ +EG +FAR GC F+E SA+ + V Q F Sbjct: 85 IIFVYDVTRRDTFESLEANWMREFDIYSTVESAIKMVVANKVDLSAQRQVSSEEGHDFARRHGCLFVETSARANLAVGQAF 165
BLAST of CK939209 vs. ExPASy Swiss-Prot
Match: YPTV1_VOLCA (GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 6.077e-26 Identity = 58/83 (69.88%), Postives = 68/83 (81.93%), Query Frame = 3 Query: 219 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIM 464 E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ V++ GK +KL IWDTAGQERFRT+TSSYYRGA GII+ Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIV 86
BLAST of CK939209 vs. ExPASy Swiss-Prot
Match: YPTC1_CHLRE (GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 6.077e-26 Identity = 58/83 (69.88%), Postives = 68/83 (81.93%), Query Frame = 3 Query: 219 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIM 464 E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ V++ GK +KL IWDTAGQERFRT+TSSYYRGA GII+ Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIV 86
BLAST of CK939209 vs. ExPASy Swiss-Prot
Match: YPT1_PHYIN (Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 6.077e-26 Identity = 57/83 (68.67%), Postives = 68/83 (81.93%), Query Frame = 3 Query: 219 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIM 464 E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWDTAGQERFRT+TSSYYRGA GII+ Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIV 86
BLAST of CK939209 vs. ExPASy Swiss-Prot
Match: RBD2A_ARATH (Ras-related protein RABD2A OS=Arabidopsis thaliana GN=RABD2A PE=1 SV=3) HSP 1 Score: 118.242 bits (295), Expect = 6.077e-26 Identity = 58/83 (69.88%), Postives = 69/83 (83.13%), Query Frame = 3 Query: 219 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIM 464 E+DYLFKLL+IGDSGVGKS LLL F+ D++ E TIGVDFK++ V+ GK +KL IWDTAGQERFRT+TSSYYRGA GII+ Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIII 86 The following BLAST results are available for this feature:
BLAST of CK939209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 358
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939209 ID=CK939209; Name=CK939209; organism=Citrus sinensis; type=EST; length=882bpback to top |