CK939199

Overview
NameCK939199
Unique NameCK939199
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length636
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK939199 vs. ExPASy Swiss-Prot
Match: Y1487_ARATH (Uncharacterized protein At1g14870 OS=Arabidopsis thaliana GN=At1g14870 PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.055e-51
Identity = 87/140 (62.14%), Postives = 106/140 (75.71%), Query Frame = 3 
Query:   60 EGPWSSGLCDCFSDCSTCCLTYWCPWITFGRIAEIVDQGSSSCGVNCALYFIIAWLTGCSCLLSCGYRSKMRHQYMLKDSPCGDCLVHVFCELCALCQEYRELKSRGFDMPLGWQGNLEKQNKGLAMASTAPVVEGGMTR 479
            EG WS+G CDCFSDC  CC+T+WCP ITFG++AEIVD+GS+SCG   ALY +IA +TGC+C+ SC YR KMR QY +K   C DCL H  CELC+L Q+YRELK RG+DM LGW GN+E+Q     +A  APV +GGMTR
Sbjct:   13 EGEWSTGFCDCFSDCKNCCITFWCPCITFGQVAEIVDRGSTSCGTAGALYALIAVVTGCACIYSCFYRGKMRAQYNIKGDDCTDCLKHFCCELCSLTQQYRELKHRGYDMSLGWAGNVERQQNQGGVAMGAPVFQGGMTR 152
The following BLAST results are available for this feature:
BLAST of CK939199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1487_ARATH4.055e-5162.14Uncharacterized protein At1g14870 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004433_A06 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650003_IIF_A06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939199 ID=CK939199; Name=CK939199; organism=Citrus sinensis; type=EST; length=636bp
GGGGGATCATCATGAGCTCATCTAATTACCCAAATCAGGAGTTTGATCCT
AAGGCCACGGAGGGACCTTGGTCCTCAGGACTCTGTGACTGCTTCTCCGA
CTGCTCAACTTGTTGCTTGACATATTGGTGTCCCTGGATCACTTTTGGTC
GAATTGCTGAGATTGTTGACCAAGGATCTTCTTCTTGTGGTGTGAACTGC
GCACTTTATTTTATAATAGCTTGGCTGACAGGCTGCTCTTGCTTACTCTC
GTGCGGCTATCGATCTAAAATGAGGCACCAGTATATGTTAAAAGACAGCC
CTTGCGGGGATTGCTTGGTTCATGTTTTCTGCGAGTTGTGCGCCTTGTGT
CAAGAATATCGCGAGCTCAAATCCCGTGGATTCGACATGCCTCTTGGATG
GCAAGGAAATTTGGAGAAACAAAATAAGGGATTGGCAATGGCTTCAACGG
CTCCGGTGGTGGAAGGTGGCATGACAAGATAAAGTGGATGATCTTCAGAT
ATACAAAATAAATTCATCTACTTAATTTTATACAATTAGTAAATATGTGA
ACCGAATAATTATATGCTGTTACTTAATAATTGAGCTCTTTTAGATCTCA
CTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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