CK939196

Overview
NameCK939196
Unique NameCK939196
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length698
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939196 vs. ExPASy Swiss-Prot
Match: MOMAS_ORYSJ (Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 9.848e-28
Identity = 71/183 (38.80%), Postives = 99/183 (54.10%), Query Frame = 3
Query:  150 RLQGKVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGNQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIPANYYGVSKFGILGLVKGLAAELGRYG 698
            +L GKV               +LF K+GA+VV+AD+QD LG +L  +LG     Y+HCDV+NE +V   VD  VA+FGKLD++ N    +       + +  K D E +LAVN +G FL  KHAARVM P RRG I+ T    ++            ++ Y  SK  ++G  +  A ELGR+G
Sbjct:   14 KLVGKVAVITGGASGIGACTARLFVKHGARVVVADIQDELGASLVAELGPDASSYVHCDVTNEGDVAAAVDHAVARFGKLDVMFN-NAGVSGPPCFRMSECTKEDFERVLAVNLVGPFLGTKHAARVMAPARRGSIISTASLSSSV-------SGAASHAYTTSKHALVGFTENAAGELGRHG 188          
BLAST of CK939196 vs. ExPASy Swiss-Prot
Match: ABA2_ARATH (Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.928e-21
Identity = 72/189 (38.10%), Postives = 95/189 (50.26%), Query Frame = 3
Query:  144 SIRLQGKVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKL----GNQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIPANYYGVSKFGILGLVKGLAAELGRYG 698
            S RL GKV               +LFHK+GAKV I D+QD+LG  +   L      +   +IH DV  E ++ N VD  V  FG LDIL+N    L       I +   S+ E    VN  G FL  KHAARVM+P ++G I+     G      + G    P +Y G SK  +LGL + +AAELG++G
Sbjct:   15 SQRLLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKETAFFIHGDVRVEDDISNAVDFAVKNFGTLDILINNA-GLCGAPCPDIRNYSLSEFEMTFDVNVKGAFLSMKHAARVMIPEKKGSIVSLCSVG----GVVGGVG--PHSYVG-SKHAVLGLTRSVAAELGQHG 195          
BLAST of CK939196 vs. ExPASy Swiss-Prot
Match: TS2_MAIZE (Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20
Identity = 70/186 (37.63%), Postives = 96/186 (51.61%), Query Frame = 3
Query:  150 RLQGKVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGNQDVCYIHCDVSNEREVINLVDTTVAKF-GKLDILVNTGCNL--EYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIPANYYGVSKFGILGLVKGLAAELGRYG 698
            RL GKV               +LF K+GA+VVIAD+ D  G+ALA  LG Q V ++ CDVS E +V   VD  +++  G+LD+  N    L  + R   SIL    ++ + +L VN +G  L  KHAAR M PRR G I+        + A + G   +  + Y  SK  I+GL K  A EL  +G
Sbjct:   52 RLDGKVAIVTGGARGIGEAIVRLFAKHGARVVIADIDDAAGEALASALGPQ-VSFVRCDVSVEDDVRRAVDWALSRHGGRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRAGSIV-----SVASVAAVLG--GLGPHAYTASKHAIVGLTKNAACELRAHG 229          
BLAST of CK939196 vs. ExPASy Swiss-Prot
Match: Y019_THEMA (Uncharacterized oxidoreductase TM_0019 OS=Thermotoga maritima GN=TM_0019 PE=3 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.605e-15
Identity = 56/184 (30.43%), Postives = 87/184 (47.28%), Query Frame = 3
Query:  153 LQGKVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGNQ--DVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIP-ANYYGVSKFGILGLVKGLAAELGRY 695
            L+GKV               QLF +NG KVVIA++ +  G    + L  +  DV ++  DV++E  V N+V  TV  +G +D+LVN    +  +   SI + P  + E ++ VN  G ++ +++ A  M+ R  G I+    T          F + P    Y  SK G++ L   LA  L RY
Sbjct:    2 LEGKVAVVTGGGQGIGAAIAQLFAENGMKVVIAEIDEEAGVEREEMLRERGLDVTFVKTDVADENSVKNMVRKTVEIYGGVDVLVNNAAVMSVK---SIFERPLEEWERVIRVNLTGPYICSRYCAEEMIKRGGGVIINIAST--------RAFQSEPDTEPYSASKGGLVALTHSLAVSLSRY 174          
BLAST of CK939196 vs. ExPASy Swiss-Prot
Match: BACC2_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.197e-14
Identity = 50/161 (31.06%), Postives = 83/161 (51.55%), Query Frame = 3
Query:  213 QLFHKNGAKVVIADVQDNLGQALADKLGNQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIPANYYGVSKFGILGLVKGLAAELGRY 695
            Q F    A VV+AD+ +  G+A+  K  N  + ++H D+++E    N + + V KFG LD+L+N   N        I +   S+   +L VN  G FL++KHA + M+   +G I+ T   G      +  + +IPA  Y  SK G+L L + +A +  ++
Sbjct:   23 QAFLNQQANVVVADIDEAQGEAMIRKENNDRLHFVHTDITDEPACQNAIRSAVDKFGGLDVLIN---NAGIEIVAPIHEMELSNWNKVLNVNLTGMFLMSKHALKYMLKSGKGNIINTCSVG-----GVVAWPDIPA--YNASKGGVLQLTRSMAVDYAKH 173          
BLAST of CK939196 vs. ExPASy Swiss-Prot
Match: BACC_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13
Identity = 50/161 (31.06%), Postives = 82/161 (50.93%), Query Frame = 3
Query:  213 QLFHKNGAKVVIADVQDNLGQALADKLGNQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIPANYYGVSKFGILGLVKGLAAELGRY 695
            Q F    A VV+AD+ +  G+A+  K  N  + ++  D+++E    + V++ V  FG LD+L+N   N        I +   SD   +L VN  G FL++KHA + M+   +G I+ T   G      +  + +IPA  Y  SK G+L L K +A +  ++
Sbjct:   23 QAFLGQQANVVVADIDEAQGEAMVRKENNDRLHFVQTDITDEAACQHAVESAVHTFGGLDVLIN---NAGIEIVAPIHEMELSDWNKVLQVNLTGMFLMSKHALKHMLAAGKGNIINTCSVG-----GLVAWPDIPA--YNASKGGVLQLTKSMAVDYAKH 173          
BLAST of CK939196 vs. ExPASy Swiss-Prot
Match: Y325_THEMA (Uncharacterized oxidoreductase TM_0325 OS=Thermotoga maritima GN=TM_0325 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.994e-12
Identity = 57/187 (30.48%), Postives = 86/187 (45.99%), Query Frame = 3
Query:  147 IRLQGKVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGNQ--DVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIPAN-YYGVSKFGILGLVKGLAAELGRYG 698
            +  QGKV                +F + GAKV I D+ +  G+   + + +   +  +I  DV+ + E I  V  TV  FG+LDILVN    + Y    +I +T + D +  +AVN  G FL++K+A   M  +  G I+  +           G   IP    Y VSK  +LGL + LA +   YG
Sbjct:    1 MNFQGKVVLITGAGSGIGKKAAVMFAERGAKVAINDISEEKGKETVELIKSMGGEAAFIFGDVAKDAEQI--VKKTVETFGRLDILVNNAGIVPYG---NIEETSEEDFDKTMAVNVKGPFLLSKYAVEQMKKQGGGVIVNVSSEA--------GLIGIPRRCVYSVSKAALLGLTRSLAVDYVDYG 174          
BLAST of CK939196 vs. ExPASy Swiss-Prot
Match: BACC_BACAM (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus amyloliquefaciens GN=bacC PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12
Identity = 49/148 (33.11%), Postives = 75/148 (50.68%), Query Frame = 3
Query:  213 QLFHKNGAKVVIADVQDNLGQALADKLGNQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIPANYYGVSKFGIL 656
            Q F    A VV+AD+ +  G+A+  K  N  + ++  D++NE    N + + V KFG LD+L+N   N        I +   SD   +L VN  G FL++KHA + M+   +G I+ T   G      +  + +IPA  Y  SK G+L
Sbjct:   23 QAFLNQQANVVVADIDEAQGEAMIRKENNDRLHFVQTDITNEPACQNAILSAVDKFGGLDVLIN---NAGIEIVAPIHEMELSDWNKVLNVNLTGMFLMSKHALKYMLKSGKGNIINTCSVG-----GVVAWPDIPA--YNASKGGVL 160          
BLAST of CK939196 vs. ExPASy Swiss-Prot
Match: HSD_MYCTU (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium tuberculosis GN=fabG3 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.292e-11
Identity = 59/190 (31.05%), Postives = 82/190 (43.16%), Query Frame = 3
Query:  141 LSIRLQGKVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGNQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTG----TGTTACAEIEGFCNIPANYYGVSKFGILGLVKGLAAELGRYG 698
            +S RL GKV               +     GAKVV  D+ D  G+A+A +L +    Y+H DV+   +    VDT V  FG L +LVN   N       +I D   ++ + +L VN  G FL  +   + M    RG I+  +      GT AC           + Y  +KF + GL K  A ELG  G
Sbjct:    1 MSGRLIGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAVAAELADA-ARYVHLDVTQPAQWTAAVDTAVTAFGGLHVLVN---NAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVAC-----------HGYTATKFAVRGLTKSTALELGPSG 175          
BLAST of CK939196 vs. ExPASy Swiss-Prot
Match: HSD_MYCBO (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium bovis GN=fabG3 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.292e-11
Identity = 59/190 (31.05%), Postives = 82/190 (43.16%), Query Frame = 3
Query:  141 LSIRLQGKVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGNQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTG----TGTTACAEIEGFCNIPANYYGVSKFGILGLVKGLAAELGRYG 698
            +S RL GKV               +     GAKVV  D+ D  G+A+A +L +    Y+H DV+   +    VDT V  FG L +LVN   N       +I D   ++ + +L VN  G FL  +   + M    RG I+  +      GT AC           + Y  +KF + GL K  A ELG  G
Sbjct:    1 MSGRLIGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAVAAELADA-ARYVHLDVTQPAQWTAAVDTAVTAFGGLHVLVN---NAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVAC-----------HGYTATKFAVRGLTKSTALELGPSG 175          
The following BLAST results are available for this feature:
BLAST of CK939196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
MOMAS_ORYSJ9.848e-2838.80Momilactone A synthase OS=Oryza sativa subsp. japo... [more]
ABA2_ARATH8.928e-2138.10Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN... [more]
TS2_MAIZE2.598e-2037.63Sex determination protein tasselseed-2 OS=Zea mays... [more]
Y019_THEMA5.605e-1530.43Uncharacterized oxidoreductase TM_0019 OS=Thermoto... [more]
BACC2_BACSU6.197e-1431.06Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
BACC_BACSU5.246e-1331.06Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
Y325_THEMA1.994e-1230.48Uncharacterized oxidoreductase TM_0325 OS=Thermoto... [more]
BACC_BACAM3.401e-1233.11Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
HSD_MYCTU1.292e-1131.053-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
HSD_MYCBO1.292e-1131.053-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004433_A03 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650003_IIF_A03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939196 ID=CK939196; Name=CK939196; organism=Citrus sinensis; type=EST; length=698bp
GGGGACACTGCCAAGAGAAGGAAATAATCACAAGCCAAACCTTGTATTTT
AACAATCTTGATTGAGTTTCAGGTTTTTGAGGAAATTTTTTCACACAGGC
TTGTAGTACTACTGCAGCAGCACCCTGCGAAAGGTGTCAACTCAGCATTC
GGTTACAAGGCAAAGTGGCAATCATTACTGGCGGAGCAAGCGGGATCGGA
GCATCTGCGGCTCAGCTTTTCCACAAAAATGGAGCCAAAGTTGTCATAGC
CGATGTGCAAGATAATCTTGGCCAAGCCCTAGCCGATAAGCTAGGCAACC
AGGATGTCTGCTACATCCATTGTGATGTATCAAATGAAAGGGAAGTCATC
AATCTTGTTGATACCACCGTTGCTAAATTCGGAAAGCTCGACATCCTGGT
CAATACCGGATGCAATCTTGAGTATCGTGGTTTCGTGAGCATTTTGGACA
CCCCAAAGTCTGATCTAGAACATTTACTGGCTGTGAACACAATTGGTGGT
TTCTTAGTAGCCAAGCATGCTGCAAGAGTCATGGTGCCACGCCGCAGAGG
TTGCATATTGTATACAACGGGTACGGGCACTACTGCTTGTGCGGAAATTG
AAGGTTTCTGCAATATTCCAGCTAATTATTATGGAGTGTCAAAATTTGGT
ATCTTGGGACTTGTCAAGGGCTTAGCGGCAGAGCTTGGACGGTATGGA
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