CK939182
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939182 vs. ExPASy Swiss-Prot
Match: UCRI1_TOBAC (Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 385.571 bits (989), Expect = 1.102e-106 Identity = 182/205 (88.78%), Postives = 195/205 (95.12%), Query Frame = 1 Query: 4 SLGRDLGLISDLPATVAAVKNPTSKIVYDEHNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLL 618 S D+GL+ DLP TVAA+KNPTSKIVYDEHNHERYPPGD SKRAFAYF+LTGGRFVYASL+RLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTE+DI LANSVD+ SLRDPQ+D+ RVKNPEWLVV+GVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAP+NLEVP Y+FL+ENKLL Sbjct: 52 SPAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLMRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDISLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLL 256
BLAST of CK939182 vs. ExPASy Swiss-Prot
Match: UCRI4_TOBAC (Cytochrome b-c1 complex subunit Rieske-4, mitochondrial OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 384.415 bits (986), Expect = 2.455e-106 Identity = 181/205 (88.29%), Postives = 195/205 (95.12%), Query Frame = 1 Query: 4 SLGRDLGLISDLPATVAAVKNPTSKIVYDEHNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLL 618 S D+GL+ DLP TVAA+KNPTSKIVYDEHNHERYPPGD SKRAFAYF+LTGGRFVYASL+RLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTE+DI LANSVD+ SLRDPQ+D+ RVK+PEWLVV+GVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAP+NLEVP Y+FL+ENKLL Sbjct: 30 SHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLL 234
BLAST of CK939182 vs. ExPASy Swiss-Prot
Match: UCRI2_TOBAC (Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 384.415 bits (986), Expect = 2.455e-106 Identity = 181/205 (88.29%), Postives = 195/205 (95.12%), Query Frame = 1 Query: 4 SLGRDLGLISDLPATVAAVKNPTSKIVYDEHNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLL 618 S D+GL+ DLP TVAA+KNPTSKIVYDEHNHERYPPGD SKRAFAYF+LTGGRFVYASL+RLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTE+DI LANSVD+ SLRDPQ+D+ RVK+PEWLVV+GVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAP+NLEVP Y+FL+ENKLL Sbjct: 66 SHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLL 270
BLAST of CK939182 vs. ExPASy Swiss-Prot
Match: UCRI3_TOBAC (Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 380.948 bits (977), Expect = 2.715e-105 Identity = 179/199 (89.95%), Postives = 193/199 (96.98%), Query Frame = 1 Query: 22 GLISDLPATVAAVKNPTSKIVYDEHNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLL 618 GL+SDLPATVAA+KNP+SKIVYD+ NHERYPPGD SKRAFAYF+LTGGRFVYASL+RLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDI LANSVD+ SLRDPQ+D+ RVKNPEWLVV+GVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAP+NLEVP Y+F++ENKLL Sbjct: 68 GLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFMEENKLL 266
BLAST of CK939182 vs. ExPASy Swiss-Prot
Match: UCRI5_TOBAC (Cytochrome b-c1 complex subunit Rieske-5, mitochondrial OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 379.793 bits (974), Expect = 6.048e-105 Identity = 178/199 (89.45%), Postives = 193/199 (96.98%), Query Frame = 1 Query: 22 GLISDLPATVAAVKNPTSKIVYDEHNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLL 618 GL+SDLPATVAA+KNP+SKIVYD+ NHERYPPGD SKRAFAYF+LTGGRFVYASL+RLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT+EDI LANSVD+ SLRDPQ+D+ RVKNPEWLVV+GVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAP+NLEVP Y+F++ENKLL Sbjct: 68 GLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFMEENKLL 266
BLAST of CK939182 vs. ExPASy Swiss-Prot
Match: UCRI_SOLTU (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum GN=FES1 PE=1 SV=1) HSP 1 Score: 377.096 bits (967), Expect = 3.920e-104 Identity = 178/205 (86.83%), Postives = 195/205 (95.12%), Query Frame = 1 Query: 4 SLGRDLGLISDLPATVAAVKNPTSKIVYDEHNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLL 618 S LGL+SDLPATVAA+KNP+SKIVYD+ NHERYPPGD SKRAFAYF+LTGGRFVYAS +RLLILKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT++DI+LANSVD+ +LRDPQ+D+ RVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAP+NLEVP Y+FL+ENKLL Sbjct: 59 SPAHQLGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFVYASSVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTDDDIKLANSVDLGTLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLL 263
BLAST of CK939182 vs. ExPASy Swiss-Prot
Match: UCRI_MAIZE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Zea mays PE=2 SV=1) HSP 1 Score: 373.629 bits (958), Expect = 4.334e-103 Identity = 177/202 (87.62%), Postives = 194/202 (96.04%), Query Frame = 1 Query: 13 RDLGLISDLPATVAAVKNPTSKIVYDEHNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLL 618 +D GL +DLPATVAAVKNP K+VYDE+NHERYPPGD SKRAFAYF+L+GGRF+YASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTE+DI+LANSVDVASLR P++D+ RVKNPEWLVV+GVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVP Y+FL+ENKLL Sbjct: 71 QDAGL-ADLPATVAAVKNPNPKVVYDEYNHERYPPGDPSKRAFAYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVASLRHPEQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPTYSFLEENKLL 271
BLAST of CK939182 vs. ExPASy Swiss-Prot
Match: UCRI_NEUCR (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Neurospora crassa GN=NCU06606 PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.157e-55 Identity = 100/169 (59.17%), Postives = 131/169 (77.51%), Query Frame = 1 Query: 112 PPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLL 618 PP ++ F+YF++ + A+ + I +F+ +MSAS DVLA+A +EVDL++I G V +KWRGKPVFIR RT +I+ AN V+VA+LRDP+ D+ RVK PEWLV++GVCTHLGC+P+ AGD+GGWFCPCHGSHYDISGRIRKGPAP NLE+P+Y F +E KL+ Sbjct: 63 PP--STNMLFSYFMVGTMGAITAAGAKSTIQEFLKNMSASADVLAMAKVEVDLNAIPEGKNVIIKWRGKPVFIRHRTPAEIEEANKVNVATLRDPETDADRVKKPEWLVMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRKGPAPLNLEIPLYEFPEEGKLV 229
BLAST of CK939182 vs. ExPASy Swiss-Prot
Match: UCRI_YEAST (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Saccharomyces cerevisiae GN=RIP1 PE=1 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 4.859e-54 Identity = 102/195 (52.31%), Postives = 142/195 (72.82%), Query Frame = 1 Query: 37 LPATVAAVKNPTSKIVYDEHNHERYPPGDASK-RAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLL 618 L A+ + + P V E+N DA K R++AYF++ + ++ + + F+ SM+A+ DVLA+A +EV+L++I G V VKW+GKPVFIR RT +IQ ANSVD+++L+DPQ D+ RVK+P+WL+++G+CTHLGC+P+ AGDFGGWFCPCHGSHYDISGRIRKGPAP NLE+P Y F D +K++ Sbjct: 27 LLASKSTYRTPNFDDVLKENN-------DADKGRSYAYFMVGAMGLLSSAGAKSTVETFISSMTATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSALKDPQTDADRVKDPQWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPAYEF-DGDKVI 213
BLAST of CK939182 vs. ExPASy Swiss-Prot
Match: UCRI_SCHPO (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Schizosaccharomyces pombe GN=rip1 PE=2 SV=2) HSP 1 Score: 204.527 bits (519), Expect = 3.482e-52 Identity = 97/170 (57.06%), Postives = 123/170 (72.35%), Query Frame = 1 Query: 88 DEHNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNF 597 D ++ GD S R +Y ++ + A+ + + F+ S SAS DVLA++ EVDLS I G + VKW+GKPVFIR RT E+IQ ANSVD+++LRDPQ DS RV+ PEWLV++GVCTHLGC+P+ AGD+GGWFCPCHGSHYDISGRIR+GPAP NL +P Y F Sbjct: 52 DFSEYQTKSTGDRS-RVISYAMVGTMGALTAAGAQATVHDFLASWSASADVLAMSKAEVDLSKIPEGKNLVVKWQGKPVFIRHRTPEEIQEANSVDISTLRDPQADSDRVQKPEWLVMIGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRRGPAPLNLAIPAYTF 220 The following BLAST results are available for this feature:
BLAST of CK939182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939182 ID=CK939182; Name=CK939182; organism=Citrus sinensis; type=EST; length=620bpback to top |