CX675622
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675622 vs. ExPASy Swiss-Prot
Match: IPT9_ARATH (tRNA isopentenyltransferase 9 OS=Arabidopsis thaliana GN=IPT9 PE=2 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 1.662e-65 Identity = 123/166 (74.10%), Postives = 139/166 (83.73%), Query Frame = 3 Query: 153 TSCSVA-------SSKKEKVIVISGPTGAGKSRLALELAKRLNGEIISADSVQVYRGLDIGSAKPSSSDRKEVPHHLIDILHPCEDYSVGKFFEDARHATKDVLKKGRVPIVTGGTGLYLRWFIYGKPDVPKASPEIIAEVNSELADLQRDGDWYAAVEFVVKAGD 629 T+CSV S+KEKVIVISGPTGAGKSRLA+ELAKRLNGEIISADSVQVY+GLD+GSAKPS SDRK VPHHLIDILHP +DYSVG+F++D R ATKD+L +GRVPIVTGGTGLYLRWF+YGKPDVPK SPE+IAE + L Q + +W AAVE VV AGD Sbjct: 33 TACSVPLNGNKKKKSEKEKVIVISGPTGAGKSRLAMELAKRLNGEIISADSVQVYKGLDVGSAKPSDSDRKVVPHHLIDILHPSQDYSVGQFYDDGRQATKDILNRGRVPIVTGGTGLYLRWFMYGKPDVPKPSPEVIAEAHDMLVGFQTEYNWDAAVELVVNAGD 198
BLAST of CX675622 vs. ExPASy Swiss-Prot
Match: MIAA_XYLFA (tRNA Delta(2)-isopentenylpyrophosphate transferase OS=Xylella fastidiosa GN=miaA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.861e-33 Identity = 69/124 (55.65%), Postives = 90/124 (72.58%), Query Frame = 3 Query: 192 IVISGPTGAGKSRLALELAKRLNGEIISADSVQVYRGLDIGSAKPSSSDRKEVPHHLIDILHPCEDYSVGKFFEDARHATKDVLKKGRVPIVTGGTGLYLRWFIYGKPDVPKASPEIIAEVNSE 563 IV+ GPT +GKS+LA+++AKR GE+IS DSV VYRGLDIG+AKP+++ R VPHHLIDI P E YS F DAR A ++++G +PI+TGGTGLY R + G D+P A PEI A + +E Sbjct: 10 IVLMGPTASGKSQLAIDIAKRWGGEVISVDSVLVYRGLDIGTAKPNAAMRASVPHHLIDICEPWETYSAADFAHDARAAIDMIVRRGALPILTGGTGLYFRALLAGLSDMPPAHPEIRAMITAE 133
BLAST of CX675622 vs. ExPASy Swiss-Prot
Match: MIAA_XYLFT (tRNA Delta(2)-isopentenylpyrophosphate transferase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=miaA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.879e-33 Identity = 69/124 (55.65%), Postives = 90/124 (72.58%), Query Frame = 3 Query: 192 IVISGPTGAGKSRLALELAKRLNGEIISADSVQVYRGLDIGSAKPSSSDRKEVPHHLIDILHPCEDYSVGKFFEDARHATKDVLKKGRVPIVTGGTGLYLRWFIYGKPDVPKASPEIIAEVNSE 563 IV+ GPT +GKS+LA+++AKR GE+IS DSV VYRGLDIG+AKP+++ R VPHHLIDI P E YS F DAR A ++++G +PI+TGGTGLY R + G D+P A PEI A + +E Sbjct: 10 IVLMGPTASGKSQLAIDIAKRWGGEVISVDSVLVYRGLDIGTAKPNAAMRASVPHHLIDICEPWETYSAADFAHDARAAIDMIVRRGALPILTGGTGLYFRALLAGLSDMPPAHPEIRAMIAAE 133
BLAST of CX675622 vs. ExPASy Swiss-Prot
Match: MIAA_XYLFM (tRNA Delta(2)-isopentenylpyrophosphate transferase OS=Xylella fastidiosa (strain M12) GN=miaA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.879e-33 Identity = 69/124 (55.65%), Postives = 90/124 (72.58%), Query Frame = 3 Query: 192 IVISGPTGAGKSRLALELAKRLNGEIISADSVQVYRGLDIGSAKPSSSDRKEVPHHLIDILHPCEDYSVGKFFEDARHATKDVLKKGRVPIVTGGTGLYLRWFIYGKPDVPKASPEIIAEVNSE 563 IV+ GPT +GKS+LA+++AKR GE+IS DSV VYRGLDIG+AKP+++ R VPHHLIDI P E YS F DAR A ++++G +PI+TGGTGLY R + G D+P A PEI A + +E Sbjct: 10 IVLMGPTASGKSQLAIDIAKRWGGEVISVDSVLVYRGLDIGTAKPNAAMRASVPHHLIDICEPWETYSAADFAHDARAAIDMIVRRGALPILTGGTGLYFRALLAGLSDMPPAHPEIRAMIAAE 133
BLAST of CX675622 vs. ExPASy Swiss-Prot
Match: MIAA_XYLF2 (tRNA Delta(2)-isopentenylpyrophosphate transferase OS=Xylella fastidiosa (strain M23) GN=miaA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.879e-33 Identity = 69/124 (55.65%), Postives = 90/124 (72.58%), Query Frame = 3 Query: 192 IVISGPTGAGKSRLALELAKRLNGEIISADSVQVYRGLDIGSAKPSSSDRKEVPHHLIDILHPCEDYSVGKFFEDARHATKDVLKKGRVPIVTGGTGLYLRWFIYGKPDVPKASPEIIAEVNSE 563 IV+ GPT +GKS+LA+++AKR GE+IS DSV VYRGLDIG+AKP+++ R VPHHLIDI P E YS F DAR A ++++G +PI+TGGTGLY R + G D+P A PEI A + +E Sbjct: 10 IVLMGPTASGKSQLAIDIAKRWGGEVISVDSVLVYRGLDIGTAKPNAAMRASVPHHLIDICEPWETYSAADFAHDARAAIDMIVRRGALPILTGGTGLYFRALLAGLSDMPPAHPEIRAMIAAE 133
BLAST of CX675622 vs. ExPASy Swiss-Prot
Match: MIAA1_GEOBB (tRNA Delta(2)-isopentenylpyrophosphate transferase 1 OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=miaA1 PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 6.373e-33 Identity = 68/122 (55.74%), Postives = 90/122 (73.77%), Query Frame = 3 Query: 177 KKEKVIVISGPTGAGKSRLALELAKRLNGEIISADSVQVYRGLDIGSAKPSSSDRKEVPHHLIDILHPCEDYSVGKFFEDARHATKDVLKKGRVPIVTGGTGLYLRWFIYGKPDVPKASPEI 542 KK KVIV+ GPTG+GKS LA++LA+ + GEI++ADS+QVYR LDIG+AKPS++D VPHHLIDIL P ED++ F +A A D+ ++G+ IV GGTGLY+R +YG D P PE+ Sbjct: 6 KKIKVIVLGGPTGSGKSDLAVKLAEEIGGEIVNADSMQVYRRLDIGTAKPSAADLARVPHHLIDILDPNEDFTASDFRREATAAIADIERRGKRAIVVGGTGLYIRALLYGLVDSPTGDPEL 127
BLAST of CX675622 vs. ExPASy Swiss-Prot
Match: MIAA_METCA (tRNA Delta(2)-isopentenylpyrophosphate transferase OS=Methylococcus capsulatus GN=miaA PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.497e-31 Identity = 65/145 (44.83%), Postives = 100/145 (68.97%), Query Frame = 3 Query: 165 VASSKKEKVIVISGPTGAGKSRLALELAKRLNGEIISADSVQVYRGLDIGSAKPSSSDRKEVPHHLIDILHPCEDYSVGKFFEDARHATKDVLKKGRVPIVTGGTGLYLRWFIYGKPDVPKASPEIIAEVNSELADLQRDGDWYA 599 +++++ V+V+ GPT +GKS+LA+ELA L+GEI+S DS VYRG+DIG+AKP+ ++R VPHHLID+L P E +S G+F ++A D+ +GR+P++ GGT LY + G ++P A P++ E+ + A RDG W+A Sbjct: 1 MSAAELPPVVVLMGPTASGKSQLAIELANALDGEIVSVDSSLVYRGMDIGTAKPTPTERAAVPHHLIDVLDPSEVFSTGRFRDEALALIADITARGRLPVLAGGTMLYFNALLRGLAELPSADPDLRREIETRAA---RDG-WHA 141
BLAST of CX675622 vs. ExPASy Swiss-Prot
Match: MIAA_PARUW (tRNA Delta(2)-isopentenylpyrophosphate transferase OS=Protochlamydia amoebophila (strain UWE25) GN=miaA PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.965e-31 Identity = 66/132 (50.00%), Postives = 91/132 (68.94%), Query Frame = 3 Query: 180 KEKVIVISGPTGAGKSRLALELAKRLNGEIISADSVQVYRGLDIGSAKPSSSDRKEVPHHLIDILHPCEDYSVGKFFEDARHATKDVLKKGRVPIVTGGTGLYLRWFIYGKPDVPKASPEIIAEVNSELADL 575 K+++IVI+GPT GKS LAL LA+ ++GEIISADS+QVYRG+DIG+AK + +R VPHHLIDI E ++V F+ +AR A + +L +G VPI+ GG+G YL +YG P P + PE+ E+ L Sbjct: 35 KKRIIVIAGPTCCGKSALALNLAQTMDGEIISADSMQVYRGMDIGTAKATKEERLFVPHHLIDIRDIQESFNVVDFYYEARQACQKILDQGNVPIIAGGSGFYLHALLYGPPSGPPSVPEVRKSFEDEIERL 166
BLAST of CX675622 vs. ExPASy Swiss-Prot
Match: MIAA_HALHL (tRNA Delta(2)-isopentenylpyrophosphate transferase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=miaA PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.267e-30 Identity = 65/127 (51.18%), Postives = 85/127 (66.93%), Query Frame = 3 Query: 189 VIVISGPTGAGKSRLALELAKRLNGEIISADSVQVYRGLDIGSAKPSSSDRKEVPHHLIDILHPCEDYSVGKFFEDARHATKDVLKKGRVPIVTGGTGLYLRWFIYGKPDVPKASPEIIAEVNSELA 569 V+ I GPT GKS LAL LA+RL GEI+S DS Q+YRGLDIG+AKPS + R PHHLIDI P E YS +F DA+ A + +GR+P++ GGTGLY + +G +P A ++ AE+ +E A Sbjct: 5 VLCIMGPTAVGKSELALSLAERLGGEIVSVDSAQIYRGLDIGTAKPSPAVRARCPHHLIDIRDPAERYSAAEFARDAQAAIAAIRSRGRLPVLVGGTGLYFQALQHGLSPMPAADAQVRAELEAEEA 131
BLAST of CX675622 vs. ExPASy Swiss-Prot
Match: MIAA_DEIGD (tRNA Delta(2)-isopentenylpyrophosphate transferase OS=Deinococcus geothermalis (strain DSM 11300) GN=miaA PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.049e-30 Identity = 63/127 (49.61%), Postives = 88/127 (69.29%), Query Frame = 3 Query: 189 VIVISGPTGAGKSRLALELAKRLNGEIISADSVQVYRGLDIGSAKPSSSDRKEVPHHLIDILHPCEDYSVGKFFEDARHATKDVLKKGRVPIVTGGTGLYLRWFIYGKPDVPKASPEIIAEVNSELA 569 V +++ PT AGKS LAL L ++ E+I+AD+ VYRGLDIG+AKP+ ++R +VPHHL+D++ EDY V ++ A A DVL +GRVP+V GGTG YL + G P P A P++ AEV ++LA Sbjct: 4 VPLLTAPTAAGKSALALALGRQFGLEVIAADAFTVYRGLDIGTAKPTPAERAQVPHHLLDVVDVTEDYDVARYTRAAESAIADVLARGRVPLVVGGTGFYLSALVRGLPLTPPADPQMRAEVEADLA 130 The following BLAST results are available for this feature:
BLAST of CX675622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX675622 ID=CX675622; Name=CX675622; organism=Citrus sinensis; type=EST; length=630bpback to top |