CK939146
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939146 vs. ExPASy Swiss-Prot
Match: RS31_ARATH (40S ribosomal protein S3-1 OS=Arabidopsis thaliana GN=RPS3A PE=2 SV=1) HSP 1 Score: 319.316 bits (817), Expect = 4.908e-100 Identity = 163/173 (94.22%), Postives = 169/173 (97.69%), Query Frame = 1 Query: 100 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNSRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVR 618 MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELYAEKVN+RGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYMVSSGQP EYID+AVR Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVR 173 HSP 2 Score: 66.6254 bits (161), Expect = 4.908e-100 Identity = 30/39 (76.92%), Postives = 32/39 (82.05%), Query Frame = 2 Query: 620 HVLLRQGVLGIKVKIMXXWDPNGKQXPTTPLPDLVTIHS 736 HVLLRQGVLGIKVKIM WDP GK P TPLPD+V IH+ Sbjct: 174 HVLLRQGVLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHA 212
BLAST of CK939146 vs. ExPASy Swiss-Prot
Match: RS33_ARATH (40S ribosomal protein S3-3 OS=Arabidopsis thaliana GN=RPS3C PE=1 SV=1) HSP 1 Score: 317.775 bits (813), Expect = 6.403e-100 Identity = 162/173 (93.64%), Postives = 169/173 (97.69%), Query Frame = 1 Query: 100 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNSRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVR 618 MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP++SVELYAEKV +RGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYMVSSGQP EYID+AVR Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVR 173 HSP 2 Score: 67.781 bits (164), Expect = 6.403e-100 Identity = 30/39 (76.92%), Postives = 33/39 (84.62%), Query Frame = 2 Query: 620 HVLLRQGVLGIKVKIMXXWDPNGKQXPTTPLPDLVTIHS 736 HVLLRQGVLG+KVKIM WDP GKQ P TPLPD+V IH+ Sbjct: 174 HVLLRQGVLGLKVKIMLDWDPKGKQGPMTPLPDVVIIHT 212
BLAST of CK939146 vs. ExPASy Swiss-Prot
Match: RS32_ARATH (40S ribosomal protein S3-2 OS=Arabidopsis thaliana GN=RPS3B PE=1 SV=1) HSP 1 Score: 318.931 bits (816), Expect = 3.157e-99 Identity = 163/173 (94.22%), Postives = 168/173 (97.11%), Query Frame = 1 Query: 100 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNSRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVR 618 M TQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELYAEKVN+RGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYMVSSGQP EYIDSAVR Sbjct: 1 MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVR 173 HSP 2 Score: 64.3142 bits (155), Expect = 3.157e-99 Identity = 29/39 (74.36%), Postives = 31/39 (79.49%), Query Frame = 2 Query: 620 HVLLRQGVLGIKVKIMXXWDPNGKQXPTTPLPDLVTIHS 736 HVLLRQGVLGIKVK+M WDP G P TPLPD+V IHS Sbjct: 174 HVLLRQGVLGIKVKVMLDWDPKGISGPKTPLPDVVIIHS 212
BLAST of CK939146 vs. ExPASy Swiss-Prot
Match: RS31_XENLA (40S ribosomal protein S3-A OS=Xenopus laevis GN=rps3-A PE=2 SV=2) HSP 1 Score: 295.819 bits (756), Expect = 8.487e-91 Identity = 152/173 (87.86%), Postives = 159/173 (91.91%), Query Frame = 1 Query: 100 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNSRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVR 618 MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV +RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVR Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVR 173 HSP 2 Score: 59.3066 bits (142), Expect = 8.487e-91 Identity = 28/37 (75.68%), Postives = 30/37 (81.08%), Query Frame = 2 Query: 620 HVLLRQGVLGIKVKIMXXWDPNGKQXPTTPLPDLVTI 730 HVLLRQGVLGIKVKIM WDP+GK P PLPD V+I Sbjct: 174 HVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSI 210
BLAST of CK939146 vs. ExPASy Swiss-Prot
Match: RS3_RAT (40S ribosomal protein S3 OS=Rattus norvegicus GN=Rps3 PE=2 SV=1) HSP 1 Score: 295.819 bits (756), Expect = 8.488e-91 Identity = 152/173 (87.86%), Postives = 159/173 (91.91%), Query Frame = 1 Query: 100 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNSRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVR 618 MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV +RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVR Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVR 173 HSP 2 Score: 59.3066 bits (142), Expect = 8.488e-91 Identity = 28/37 (75.68%), Postives = 30/37 (81.08%), Query Frame = 2 Query: 620 HVLLRQGVLGIKVKIMXXWDPNGKQXPTTPLPDLVTI 730 HVLLRQGVLGIKVKIM WDP+GK P PLPD V+I Sbjct: 174 HVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSI 210
BLAST of CK939146 vs. ExPASy Swiss-Prot
Match: RS3_MOUSE (40S ribosomal protein S3 OS=Mus musculus GN=Rps3 PE=1 SV=1) HSP 1 Score: 295.819 bits (756), Expect = 8.488e-91 Identity = 152/173 (87.86%), Postives = 159/173 (91.91%), Query Frame = 1 Query: 100 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNSRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVR 618 MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV +RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVR Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVR 173 HSP 2 Score: 59.3066 bits (142), Expect = 8.488e-91 Identity = 28/37 (75.68%), Postives = 30/37 (81.08%), Query Frame = 2 Query: 620 HVLLRQGVLGIKVKIMXXWDPNGKQXPTTPLPDLVTI 730 HVLLRQGVLGIKVKIM WDP+GK P PLPD V+I Sbjct: 174 HVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSI 210
BLAST of CK939146 vs. ExPASy Swiss-Prot
Match: RS3_PIG (40S ribosomal protein S3 OS=Sus scrofa GN=RPS3 PE=2 SV=1) HSP 1 Score: 295.819 bits (756), Expect = 1.107e-90 Identity = 152/173 (87.86%), Postives = 159/173 (91.91%), Query Frame = 1 Query: 100 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNSRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVR 618 MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV +RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVR Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVR 173 HSP 2 Score: 58.9214 bits (141), Expect = 1.107e-90 Identity = 28/37 (75.68%), Postives = 29/37 (78.38%), Query Frame = 2 Query: 620 HVLLRQGVLGIKVKIMXXWDPNGKQXPTTPLPDLVTI 730 HVLLRQGVLGIKVKIM WDP GK P PLPD V+I Sbjct: 174 HVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSI 210
BLAST of CK939146 vs. ExPASy Swiss-Prot
Match: RS3_HUMAN (40S ribosomal protein S3 OS=Homo sapiens GN=RPS3 PE=1 SV=2) HSP 1 Score: 295.819 bits (756), Expect = 1.107e-90 Identity = 152/173 (87.86%), Postives = 159/173 (91.91%), Query Frame = 1 Query: 100 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNSRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVR 618 MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV +RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVR Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVR 173 HSP 2 Score: 58.9214 bits (141), Expect = 1.107e-90 Identity = 28/37 (75.68%), Postives = 29/37 (78.38%), Query Frame = 2 Query: 620 HVLLRQGVLGIKVKIMXXWDPNGKQXPTTPLPDLVTI 730 HVLLRQGVLGIKVKIM WDP GK P PLPD V+I Sbjct: 174 HVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSI 210
BLAST of CK939146 vs. ExPASy Swiss-Prot
Match: RS3_BOVIN (40S ribosomal protein S3 OS=Bos taurus GN=RPS3 PE=2 SV=1) HSP 1 Score: 295.819 bits (756), Expect = 1.107e-90 Identity = 152/173 (87.86%), Postives = 159/173 (91.91%), Query Frame = 1 Query: 100 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNSRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVR 618 MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV +RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVR Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVR 173 HSP 2 Score: 58.9214 bits (141), Expect = 1.107e-90 Identity = 28/37 (75.68%), Postives = 29/37 (78.38%), Query Frame = 2 Query: 620 HVLLRQGVLGIKVKIMXXWDPNGKQXPTTPLPDLVTI 730 HVLLRQGVLGIKVKIM WDP GK P PLPD V+I Sbjct: 174 HVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSI 210
BLAST of CK939146 vs. ExPASy Swiss-Prot
Match: RS3_AMBME (40S ribosomal protein S3 OS=Ambystoma mexicanum GN=RPS3 PE=2 SV=1) HSP 1 Score: 294.664 bits (753), Expect = 1.884e-90 Identity = 151/173 (87.28%), Postives = 159/173 (91.91%), Query Frame = 1 Query: 100 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNSRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVR 618 MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV +RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG+KGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVR Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGSKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVR 173 HSP 2 Score: 59.3066 bits (142), Expect = 1.884e-90 Identity = 28/37 (75.68%), Postives = 30/37 (81.08%), Query Frame = 2 Query: 620 HVLLRQGVLGIKVKIMXXWDPNGKQXPTTPLPDLVTI 730 HVLLRQGVLGIKVKIM WDP+GK P PLPD V+I Sbjct: 174 HVLLRQGVLGIKVKIMLAWDPSGKIGPKKPLPDHVSI 210 The following BLAST results are available for this feature:
BLAST of CK939146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK939146 ID=CK939146; Name=CK939146; organism=Citrus sinensis; type=EST; length=738bpback to top |