CK939143
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939143 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 5.873e-53 Identity = 92/112 (82.14%), Postives = 99/112 (88.39%), Query Frame = 3 Query: 3 GDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 338 GDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCG+C+EI+C ND KWCLPG+I+VTATNFC GGWCNPPQQHFDLSQPVFQ IAQYRAG+VPVAY+R Sbjct: 38 GDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRCQNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQYRAGIVPVAYRR 149
BLAST of CK939143 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 7.179e-51 Identity = 88/112 (78.57%), Postives = 98/112 (87.50%), Query Frame = 3 Query: 3 GDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 338 GDASGTMGGACGYGNLYSQGYGT+TAALSTALFNNGLSCGSC+EI+C ND KWCLPG+I+VTATNFC GGWCNPP +HFDL+QPVFQ IAQYRAG+VPV+Y+R Sbjct: 37 GDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNPPLEHFDLAQPVFQRIAQYRAGIVPVSYRR 148
BLAST of CK939143 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2) HSP 1 Score: 193.741 bits (491), Expect = 3.016e-49 Identity = 87/111 (78.38%), Postives = 94/111 (84.68%), Query Frame = 3 Query: 6 DASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 338 DASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCG+C+EIKC +D WCLPG I+VTATNFC GGWCNPP HFDLSQPVFQ IAQY+AGVVPV+Y+R Sbjct: 42 DASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCQSDGAWCLPGAIIVTATNFCPPNNALPNNAGGWCNPPLHHFDLSQPVFQRIAQYKAGVVPVSYRR 152
BLAST of CK939143 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 3.335e-48 Identity = 84/113 (74.34%), Postives = 93/113 (82.30%), Query Frame = 3 Query: 6 DASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRYA 344 DASGTMGGACGYGNLYSQGYGTNTAALSTALFN G SCG+C++IKCV+DPKWC+ GTI VT TNFC GGWCNPPQ HFDL+QP+F IAQY+AGVVPV Y+R A Sbjct: 41 DASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQIKCVDDPKWCIGGTITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQYKAGVVPVQYRRVA 153
BLAST of CK939143 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 2.823e-47 Identity = 81/113 (71.68%), Postives = 96/113 (84.96%), Query Frame = 3 Query: 6 DASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 338 DASGTMGGACGYGNLYSQGYG NTAALSTALFNNGLSCGSC+E+KC+NDP WCLPG +I++TATNFC GGWCNPP++HFDL+ P+F IA+Y+AG+VPV+Y+R Sbjct: 44 DASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASDNGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRR 156
BLAST of CK939143 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 8.214e-47 Identity = 81/111 (72.97%), Postives = 92/111 (82.88%), Query Frame = 3 Query: 6 DASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 338 DASGTMGGACGYGNLY QGYGTNTAALSTALFNNGL+CG+CYE+KC +DP+WCL TI VTATNFC GGWCNPP QHFDL++P F IAQYRAG+VPV+++R Sbjct: 42 DASGTMGGACGYGNLYGQGYGTNTAALSTALFNNGLTCGACYEMKCNDDPRWCLGSTITVTATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRR 152
BLAST of CK939143 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 8.214e-47 Identity = 82/115 (71.30%), Postives = 95/115 (82.61%), Query Frame = 3 Query: 6 DASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRYA 344 DASGTMGGACGYGNLYSQGYGTNTAALST+LFN+G SCG+C+EIKCVNDPKWC PG ++ VTATNFC GGWCNPP+ HFDL+ PVF IA+YRAG+VP++Y+R A Sbjct: 46 DASGTMGGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVA 160
BLAST of CK939143 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 1.073e-46 Identity = 81/113 (71.68%), Postives = 95/113 (84.07%), Query Frame = 3 Query: 6 DASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 338 DASGTMGGACGYGNLYSQGYGTNTAALSTALFNNG+SCG+C+E+KC NDP+WC G +I++TATNFC GGWCNPP++HFDL+ PVF IAQYRAG+VPV+Y+R Sbjct: 43 DASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRR 155
BLAST of CK939143 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 1.549e-45 Identity = 79/113 (69.91%), Postives = 93/113 (82.30%), Query Frame = 3 Query: 6 DASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 338 DASGTMGGACGYGNLYSQGYG NTAALSTALFNNG SCG+C+EIKC +DP+WC+PG +I+VTATNFC GGWCNPP++HFDL+ P+F I YRAG+VPV+Y+R Sbjct: 48 DASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHFDLAMPMFLKIGLYRAGIVPVSYRR 160
BLAST of CK939143 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 2.642e-45 Identity = 79/112 (70.54%), Postives = 92/112 (82.14%), Query Frame = 3 Query: 3 GDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 338 GDASGTMGGACGYGNLYSQGYGTNTAALSTALFN+G +CGSCYE++C N CLPG+I VTATNFC GGWCNPP+ HFD+++P F HIAQYRAG+VPV+++R Sbjct: 35 GDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRR 146 The following BLAST results are available for this feature:
BLAST of CK939143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK939143 ID=CK939143; Name=CK939143; organism=Citrus sinensis; type=EST; length=455bpback to top |