CK939135

Overview
NameCK939135
Unique NameCK939135
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length638
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH22_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 2.643e-66
Identity = 112/152 (73.68%), Postives = 126/152 (82.89%), Query Frame = 1
Query:    7 LWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWSNGKXXXXXXXXXXXXXXXXWFSQELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAEC 462
            LWFDPTA+FHTY+ILWNPQRI+F+VDGTPIREFKN ES+G  FPKN+PMR+YSSLWNADDWATRGGLVKTDW+ APFTASYR F  +ACVWSNGK                W SQELDST+Q+R++WVQ+NYMIYNYC DAKRFPQGLP EC
Sbjct:  131 LWFDPTANFHTYTILWNPQRIIFTVDGTPIREFKNMESLGTLFPKNKPMRMYSSLWNADDWATRGGLVKTDWSKAPFTASYRGFQQEACVWSNGK-SSCPNASKQGTTTGSWLSQELDSTAQQRMRWVQRNYMIYNYCTDAKRFPQGLPKEC 281          
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH23_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana GN=XTH23 PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.228e-63
Identity = 111/152 (73.03%), Postives = 122/152 (80.26%), Query Frame = 1
Query:    7 LWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWSNGKXXXXXXXXXXXXXXXXWFSQELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAEC 462
            LWFDPT+DFHTYSILWNPQRI+FSVDGTPIREFKN ES G  FPKNQPMR+YSSLWNA++WATRGGLVKTDW+ APFTASYR FN +ACV  NG+                W SQELDST QE+++WVQ NYMIYNYC DAKRFPQGLP EC
Sbjct:  134 LWFDPTSDFHTYSILWNPQRIIFSVDGTPIREFKNMESQGTLFPKNQPMRMYSSLWNAEEWATRGGLVKTDWSKAPFTASYRGFNEEACVVINGQ--SSCPNVSGQGSTGSWLSQELDSTGQEQMRWVQNNYMIYNYCTDAKRFPQGLPREC 283          
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH24_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2)

HSP 1 Score: 231.106 bits (588), Expect = 3.696e-60
Identity = 107/156 (68.59%), Postives = 120/156 (76.92%), Query Frame = 1
Query:    4 HLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWSNGKXXXXXXXXXXXXXXXXWFSQELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAECRTS 471
            HLWFDPTA+FHTYSILWNPQRI+ +VD TPIREFKN ES+GV FPKN+PMR+Y+SLWNADDWATRGGLVKTDW+ APF ASYRN   D+   SN                  W++QE+DSTSQ RLKWVQKNYMIYNYC D +RFPQG P EC TS
Sbjct:  131 HLWFDPTANFHTYSILWNPQRIILTVDDTPIREFKNYESLGVLFPKNKPMRMYASLWNADDWATRGGLVKTDWSKAPFMASYRNIKIDSKPNSN------------------WYTQEMDSTSQARLKWVQKNYMIYNYCTDHRRFPQGAPKECTTS 268          
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH20_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.075e-59
Identity = 98/153 (64.05%), Postives = 116/153 (75.82%), Query Frame = 1
Query:    4 HLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWSNGKXXXXXXXXXXXXXXXXWFSQELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAEC 462
            HLWFDPT DFHTY I+WNPQR++F++DG PIREFKNSE++GV FPK+QPMR+Y+SLW A+ WATRGGL KTDW+ APFTA YRN+N DACVWSNGK                WF+Q LD   + R+KW Q+ YM+YNYC D KRFPQG P EC
Sbjct:  137 HLWFDPTVDFHTYCIIWNPQRVIFTIDGIPIREFKNSEALGVPFPKHQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVDACVWSNGK--------SSCSANSSWFTQVLDFKGKNRVKWAQRKYMVYNYCTDKKRFPQGAPPEC 281          
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH25_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2)

HSP 1 Score: 223.787 bits (569), Expect = 5.901e-58
Identity = 100/154 (64.94%), Postives = 116/154 (75.32%), Query Frame = 1
Query:    4 HLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWSNGKXXXXXXXXXXXXXXXXWFSQELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAECR 465
            HLWFDPTADFHTYS+LWNP  IVF VD  P+REFKN + +G+ +PK QPMR+YSSLWNAD WATRGGLVKTDW+ APFTASYRNF ADACV S G+                WFSQ LD T++++++ VQ+ YMIYNYC D KRFPQG P ECR
Sbjct:  137 HLWFDPTADFHTYSVLWNPHHIVFMVDDIPVREFKNLQHMGIQYPKLQPMRLYSSLWNADQWATRGGLVKTDWSKAPFTASYRNFRADACVSSGGR-------SSCPAGSPRWFSQRLDLTAEDKMRVVQRKYMIYNYCTDTKRFPQGFPKECR 283          
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH17_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 17 OS=Arabidopsis thaliana GN=XTH17 PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.717e-57
Identity = 98/153 (64.05%), Postives = 114/153 (74.51%), Query Frame = 1
Query:    4 HLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWSNGKXXXXXXXXXXXXXXXXWFSQELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAEC 462
            HLWFDPT +FHTY I WNPQRI+F+VDG PIREFKN E+IGV FP  QPMR+Y+SLW A+ WATRGGL KTDW+ APFTA YRN+N D CVW+NGK                WF+Q+LDS  Q R+K VQ  YMIYNYC D +RFP+G+PAEC
Sbjct:  137 HLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNPEAIGVPFPTRQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVDGCVWANGK--------SSCSANSPWFTQKLDSNGQTRMKGVQSKYMIYNYCTDKRRFPRGVPAEC 281          
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH18_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 18 OS=Arabidopsis thaliana GN=XTH18 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 2.929e-57
Identity = 97/153 (63.40%), Postives = 114/153 (74.51%), Query Frame = 1
Query:    4 HLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWSNGKXXXXXXXXXXXXXXXXWFSQELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAEC 462
            HLWFDPT +FHTY I WNPQRI+F+VDG PIREFKNSESIGV FP  QPMR+Y+SLW A+ WATRGGL KTDW+ APFTA YRN+N + CVW+NGK                WF+Q+LDS  Q R+K VQ  YM+YNYC D +RFP+G+P EC
Sbjct:  137 HLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNSESIGVPFPTKQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGK--------SSCPANSSWFTQQLDSNGQTRMKGVQSKYMVYNYCNDKRRFPRGVPVEC 281          
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH19_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 19 OS=Arabidopsis thaliana GN=XTH19 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 5.523e-56
Identity = 96/153 (62.75%), Postives = 113/153 (73.86%), Query Frame = 1
Query:    4 HLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWSNGKXXXXXXXXXXXXXXXXWFSQELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAEC 462
            HLWFDPTA+FHTY I WNPQRI+F+VDG PIREF N+ES GV FP  QPMR+Y+SLW A+ WATRGGL KTDW+ APFTA YRN+N + CVW NGK                WF+Q+LDS  Q R+K VQ  YM+YNYC+D KRFP+G+P EC
Sbjct:  132 HLWFDPTANFHTYCITWNPQRIIFTVDGIPIREFMNAESRGVPFPTKQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAYYRNYNVEGCVWVNGK--------SVCPANSQWFTQKLDSNGQTRMKGVQSKYMVYNYCSDKKRFPRGVPPEC 276          
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH16_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 6.751e-54
Identity = 94/156 (60.26%), Postives = 112/156 (71.79%), Query Frame = 1
Query:    4 HLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWSNGKXXXXXXXXXXXXXXXXWFSQELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAECRTS 471
            +LWFDPT +FHTYS++W PQ I+F VD  PIR F N+E +GV FPKNQPM+IYSSLWNADDWATRGGLVKTDW+ APFTA YR FNA AC  S+G                   + EL++  + RL+WVQK +MIY+YC+D KRFPQG P ECR S
Sbjct:  134 YLWFDPTKNFHTYSLVWRPQHIIFMVDNVPIRVFNNAEQLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRGFNAAACTVSSGSSFCDPKFKSSFTNGESQVANELNAYGRRRLRWVQKYFMIYDYCSDLKRFPQGFPPECRKS 289          
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: BRU1_SOYBN (Brassinosteroid-regulated protein BRU1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 3.351e-53
Identity = 97/154 (62.99%), Postives = 112/154 (72.73%), Query Frame = 1
Query:    4 HLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWSNGKXXXXXXXXXXXXXXXXWFSQELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAECR 465
            +LWFDPT +FHTYSI+W PQ I+F VD TPIR FKN+E +GV FPKNQPMRIYSSLWNADDWATRGGLVKTDW+ APFTA YRNF          K                + + ELD+ S+ RL+WVQK +MIYNYC+D KRFPQGLPAEC+
Sbjct:  139 YLWFDPTRNFHTYSIIWKPQHIIFLVDNTPIRVFKNAEPLGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNF----------KAIEFSSKSSISNSGAEYEANELDAYSRRRLRWVQKYFMIYNYCSDLKRFPQGLPAECK 282          
The following BLAST results are available for this feature:
BLAST of CK939135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
XTH22_ARATH2.643e-6673.68Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH23_ARATH1.228e-6373.03Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH24_ARATH3.696e-6068.59Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH20_ARATH1.075e-5964.05Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH25_ARATH5.901e-5864.94Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH17_ARATH1.717e-5764.05Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH18_ARATH2.929e-5763.40Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH19_ARATH5.523e-5662.75Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH16_ARATH6.751e-5460.26Probable xyloglucan endotransglucosylase/hydrolase... [more]
BRU1_SOYBN3.351e-5362.99Brassinosteroid-regulated protein BRU1 OS=Glycine ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004433_G08 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650003_IIF_G08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939135 ID=CK939135; Name=CK939135; organism=Citrus sinensis; type=EST; length=638bp
GGGCACCTCTGGTTTGACCCCACTGCTGACTTTCACACCTATTCTATCCT
CTGGAATCCTCAGCGCATTGTCTTCTCTGTGGATGGTACTCCCATAAGAG
AGTTCAAGAACTCAGAGTCAATTGGAGTTGCATTCCCAAAGAATCAGCCA
ATGAGAATATACTCATCTCTCTGGAATGCTGATGACTGGGCTACAAGAGG
TGGCCTTGTCAAGACAGATTGGACGCATGCTCCCTTCACGGCTTCCTACA
GAAACTTCAACGCTGATGCCTGTGTCTGGTCTAATGGAAAATCTTCTTGC
GCTTCAAGTTCACCTTCCTCTCCATCCAGCAGCAGTGCCTGGTTCTCACA
AGAGCTTGATTCAACAAGTCAAGAAAGGCTGAAATGGGTGCAGAAGAATT
ACATGATTTACAATTATTGCGCTGATGCAAAGAGATTTCCCCAGGGACTC
CCTGCAGAATGCAGAACCTCTTAGAAGTTTTGCAAAATCAACACATACAT
CAAAAAAATTTATTCTTTTTGTCAATTCTTTGATTCTTTGTTGTATTTTG
TCGTCAATAAAATGGCAAATTAGTCCAACTTTCTCAATGTAATACAAAAT
TTAGCATACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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