CX675605

Overview
NameCX675605
Unique NameCX675605
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length785
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675605 vs. ExPASy Swiss-Prot
Match: CBWD1_RAT (COBW domain-containing protein 1 OS=Rattus norvegicus GN=Cbwd1 PE=2 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 2.493e-33
Identity = 88/250 (35.20%), Postives = 143/250 (57.20%), Query Frame = 1
Query:    1 TTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAFADVVILNKVDLVSPERSGDSLDELEKEIHEINSLAHVIHSVRCQVDLSEVLNCRAYDATHVTRLEGLLEEHQYKSSQNLHDNNVRTLSICEPLAVNLDKVRLWLEEILWDK----KDG--MDVYRCKGVLSVKHSDQLHTLQAVREIYEIVPAR-KWRTEENQMNKIVFIGHHLNQDILQDSFRTCTLAT 729
            TTGLA+P  +AS+ W+D +L S + LD IITVVD+K  L  + + +      EA  Q+A AD++++NK DLVS E     L++L   I  IN L  V+ + R +  LS +L+  AYD      L+  L   Q+ S+    D ++ T++   P +   + + ++++ +LW+K    KDG  M+V R KG++S+K   Q   +Q + E+YE+  +R  W+ +  +  ++VFIG +L++DILQ  F T    T
Sbjct:  136 TTGLADPGAVASMFWVDAELGSDIYLDGIITVVDSKYGLKHLTEEKPDGLVNEATRQVALADMILINKTDLVSEE----ELNKLRTTIRSINGLGKVLETQRSRTHLSNILDLHAYDTLSGISLQKKL---QHVSTAPHLDQSIVTVTFDVPGSAEEESLNVFIQNLLWEKNVKNKDGRCMEVIRLKGLVSIKDKPQQMIVQGIHELYELEESRVNWKDDAERACQLVFIGKNLDKDILQQLFITAVAET 378          
BLAST of CX675605 vs. ExPASy Swiss-Prot
Match: CBWD1_MOUSE (COBW domain-containing protein 1 OS=Mus musculus GN=Cbwd1 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.047e-31
Identity = 85/245 (34.69%), Postives = 141/245 (57.55%), Query Frame = 1
Query:    1 TTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAFADVVILNKVDLVSPERSGDSLDELEKEIHEINSLAHVIHSVRCQVDLSEVLNCRAYDATHVTRLEGLLEEHQYKSSQNLHDNNVRTLSICEPLAVNLDKVRLWLEEILWDK----KDG--MDVYRCKGVLSVKHSDQLHTLQAVREIYEIVPAR-KWRTEENQMNKIVFIGHHLNQDILQDSFRT 714
            TTGLA+P  +AS+ W+D +L S + LD IITVVD+K  L  + + +      EA  Q+A AD++++NK DLVS E     L+ L   I  IN L  V+ + R +V LS +L+  AYD      L+  L   Q+ S+    D ++ T++   P +   + + ++++ +LW+K    KDG  M+V R KG++S+K   Q   +Q + E+Y++  +   W+ +  +  ++VFIG +L++D+LQ  F T
Sbjct:  135 TTGLADPGAVASMFWVDAELGSDIYLDGIITVVDSKYGLKHLTEEKPDGLVNEATRQVALADMILINKTDLVSEE----ELNNLRTTIRSINGLGKVLETQRSRVHLSNILDLHAYDILSGISLQKKL---QHVSTAPHLDQSIVTVTFEVPGSAKEECLNVFIQNLLWEKNVKNKDGHCMEVIRLKGLVSIKDKPQQMIVQGIHELYDLEESLVNWKDDAERACQLVFIGRNLDKDVLQQLFLT 372          
BLAST of CX675605 vs. ExPASy Swiss-Prot
Match: CBWD3_HUMAN (COBW domain-containing protein 3 OS=Homo sapiens GN=CBWD3 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.975e-30
Identity = 81/243 (33.33%), Postives = 139/243 (57.20%), Query Frame = 1
Query:    1 TTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAFADVVILNKVDLVSPERSGDSLDELEKEIHEINSLAHVIHSVRCQVDLSEVLNCRAYDATHVTRLEGLLEEHQYKSSQNLHDNNVRTLSICEPLAVNLDKVRLWLEEILWDK----KDG--MDVYRCKGVLSVKHSDQLHTLQAVREIYEIVPAR-KWRTEENQMNKIVFIGHHLNQDILQDSF 708
            TTGLA+P  +AS+ W+D +L S + LD IIT+VD+K  L  + + +      EA  Q+A AD++++NK DLV PE   + + +L   I  IN L  ++ + R +VDLS VL+  A+D+     L+  L+      +Q   D ++ T++   P     + + ++++ +LW+K    KD   M+V R KG++S+K   Q   +Q V E+Y++      W+ +  + N++V IG +L++DIL+  F
Sbjct:  137 TTGLADPGAVASMFWVDAELGSDIYLDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDLV-PE---EDVKKLRTTIRSINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKLQ--HVPGTQPHLDQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDTERTNRLVLIGRNLDKDILKQLF 373          
BLAST of CX675605 vs. ExPASy Swiss-Prot
Match: CBWD5_HUMAN (COBW domain-containing protein 5 OS=Homo sapiens GN=CBWD5 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.746e-30
Identity = 80/243 (32.92%), Postives = 138/243 (56.79%), Query Frame = 1
Query:    1 TTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAFADVVILNKVDLVSPERSGDSLDELEKEIHEINSLAHVIHSVRCQVDLSEVLNCRAYDATHVTRLEGLLEEHQYKSSQNLHDNNVRTLSICEPLAVNLDKVRLWLEEILWDK----KDG--MDVYRCKGVLSVKHSDQLHTLQAVREIYEIVPAR-KWRTEENQMNKIVFIGHHLNQDILQDSF 708
            TTGLA+P  + S+ W+D +L S + LD IIT+VD+K  L  + + +      EA  Q+A AD++++NK DLV PE   + + +L   I  IN L  ++ + R +VDLS VL+  A+D+     L+  L+      +Q   D ++ T++   P     + + ++++ +LW+K    KD   M+V R KG++S+K   Q   +Q V E+Y++      W+ +  + N++V IG +L++DIL+  F
Sbjct:  137 TTGLADPGAVTSMFWVDAELGSDIYLDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDLV-PE---EDVKKLRTTIRSINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKLQ--HVPGTQPHLDQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDTERTNRLVLIGRNLDKDILKQLF 373          
BLAST of CX675605 vs. ExPASy Swiss-Prot
Match: CBWD1_HUMAN (COBW domain-containing protein 1 OS=Homo sapiens GN=CBWD1 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.505e-30
Identity = 80/243 (32.92%), Postives = 138/243 (56.79%), Query Frame = 1
Query:    1 TTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAFADVVILNKVDLVSPERSGDSLDELEKEIHEINSLAHVIHSVRCQVDLSEVLNCRAYDATHVTRLEGLLEEHQYKSSQNLHDNNVRTLSICEPLAVNLDKVRLWLEEILWDK----KDG--MDVYRCKGVLSVKHSDQLHTLQAVREIYEIVPAR-KWRTEENQMNKIVFIGHHLNQDILQDSF 708
            TTGLA+P  +AS+ W+D +L S + LD IIT+VD+K  L  + + +      EA  Q+A AD +++NK DLV PE   + + +L   I  IN L  ++ + R +VDLS VL+  A+D+     L+  L+      +Q   D ++ T++   P     + + ++++ +LW+K    KD   M+V R KG++S+K   Q   +Q V E+Y++      W+ +  + N++V +G +L++DIL+  F
Sbjct:  137 TTGLADPGAVASMFWVDAELGSDIYLDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADAILINKTDLV-PE---EDVKKLRTTIRSINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKLQ--HVPGTQPHLDQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDTERTNRLVLLGRNLDKDILKQLF 373          
BLAST of CX675605 vs. ExPASy Swiss-Prot
Match: CBWD2_HUMAN (COBW domain-containing protein 2 OS=Homo sapiens GN=CBWD2 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.802e-30
Identity = 80/243 (32.92%), Postives = 138/243 (56.79%), Query Frame = 1
Query:    1 TTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAFADVVILNKVDLVSPERSGDSLDELEKEIHEINSLAHVIHSVRCQVDLSEVLNCRAYDATHVTRLEGLLEEHQYKSSQNLHDNNVRTLSICEPLAVNLDKVRLWLEEILWDK----KDG--MDVYRCKGVLSVKHSDQLHTLQAVREIYEIVPAR-KWRTEENQMNKIVFIGHHLNQDILQDSF 708
            TTGLA+P  +AS+ W+D +L S + LD IIT+VD+K  L  + + +      EA  Q+A AD +++NK DLV PE   + + +L   I  IN L  ++ + R +VDLS VL+  A+D+     L+  L+      +Q   D ++ T++   P     + + ++++ +LW+K    KD   M+V R KG++S+K   Q   +Q V E+Y++      W+ +  + N++V +G +L++DIL+  F
Sbjct:  137 TTGLADPGAVASMFWVDAELGSDIYLDGIITIVDSKYGLKHLAEEKPDGLINEATRQVALADAILINKTDLV-PE---EDVKKLRATIRSINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKLQ--HVPGTQPHLDQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDTERTNRLVLLGRNLDKDILKQLF 373          
BLAST of CX675605 vs. ExPASy Swiss-Prot
Match: CBWD6_HUMAN (COBW domain-containing protein 6 OS=Homo sapiens GN=CBWD6 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.852e-29
Identity = 79/243 (32.51%), Postives = 138/243 (56.79%), Query Frame = 1
Query:    1 TTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAFADVVILNKVDLVSPERSGDSLDELEKEIHEINSLAHVIHSVRCQVDLSEVLNCRAYDATHVTRLEGLLEEHQYKSSQNLHDNNVRTLSICEPLAVNLDKVRLWLEEILWDK----KDG--MDVYRCKGVLSVKHSDQLHTLQAVREIYEIVPAR-KWRTEENQMNKIVFIGHHLNQDILQDSF 708
            TTGLA+P  +AS+ W+D +L S + LD IIT+VD+K  L  + + +      EA  Q+A AD++++NK DLV PE   + + +L   +  IN L  ++ + R +VDLS VL+  A+D+     L+  L+      +Q   D ++ T++   P     + + ++++ +LW+K    KD   M+V R KG++S+K   Q   +Q V E+ ++      W+ +  + N++V IG +L++DIL+  F
Sbjct:  137 TTGLADPGAVASMFWVDAELGSDIYLDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDLV-PE---EDVKKLRTTLRSINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKLQ--HVPGTQPHLDQSIVTITFDVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELCDLEETPVSWKDDTERTNRLVLIGRNLDKDILKQLF 373          
BLAST of CX675605 vs. ExPASy Swiss-Prot
Match: CBWD7_HUMAN (Putative COBW domain-containing protein 7 OS=Homo sapiens GN=CBWD7 PE=5 SV=3)

HSP 1 Score: 117.472 bits (293), Expect = 8.587e-26
Identity = 73/231 (31.60%), Postives = 129/231 (55.84%), Query Frame = 1
Query:   37 VLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAFADVVILNKVDLVSPERSGDSLDELEKEIHEINSLAHVIHSVRCQVDLSEVLNCRAYDATHVTRLEGLLEEHQYKSSQNLHDNNVRTLSICEPLAVNLDKVRLWLEEILWDK----KDG--MDVYRCKGVLSVKHSDQLHTLQAVREIYEIVPAR-KWRTEENQMNKIVFIGHHLNQDILQDSF 708
            + W+D +L S + LD IIT+VD+K  L  + + +      EA  Q+A AD++++NK DLV PE   + + +L   I  IN L  ++ + R +VDLS VL+  A+D+     L+  L+      +Q   D ++ T++   P     + + ++++ +LW+K    KD   M+V R KG++S+K   Q   +Q V E+Y++      W+ +  + N++V IG +L++DIL+  F
Sbjct:    1 MFWVDAELGSDIYLDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDLV-PE---EDVKKLRTTIRSINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKLQ--HVPGTQPHLDQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDTERTNRLVLIGRNLDKDILKQLF 225          
BLAST of CX675605 vs. ExPASy Swiss-Prot
Match: YOG5_SCHPO (COBW domain-containing protein C15D4.05 OS=Schizosaccharomyces pombe GN=SPBC15D4.05 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.283e-21
Identity = 86/256 (33.59%), Postives = 132/256 (51.56%), Query Frame = 1
Query:    1 TTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAFADVVILNKVDLVSPERSGDSLDELEKEIHEINSLAHVIHSVRCQV-DLSEVLNCRAYDATHVTRLEGLLEEHQYKS----------SQNLHDNNVRTLSI------CEPLAVN--LDKVRLWLEEILWD-KKDGMD----VYRCKGVLSVKHSDQLHTLQAVREIYEIVP-ARKWRT--EENQMNKIVFIGHHLNQ 687
            TTG+ANP PLA   WLDD L+S V+LD I+TV+D KN    ID      S    I QI+ AD +ILNK DL+S E    +L  + + I +IN LA +I +   ++ D+SE+L+  AY   + + LE  ++     +           Q+LH  +  +L I        PL       +   W+   LW   ++G D    +YR KG+ + K     +  Q VRE++EI+P + K R   E++   +I+ IG +L++
Sbjct:  157 TTGIANPGPLAQTFWLDDALKSDVKLDGIVTVIDCKN----IDNILKDESDIGFI-QISHADCLILNKTDLISSE----ALSVVRQTILKINCLAKIIETTYGRLDDISEILDLDAYGNENTSNLEWSIQRSNDSNINCSTCLDVDCQHLHSLDTHSLDISTHTFKLPPLMSKEVFQQFLQWVRHTLWSCLEEGEDEEFMIYRSKGIFN-KDDGSWYIFQGVREVFEIMPLSEKPRAFLEKDIHPEIILIGRNLHR 402          
BLAST of CX675605 vs. ExPASy Swiss-Prot
Match: YN8H_YEAST (Uncharacterized protein YNR029C OS=Saccharomyces cerevisiae GN=YNR029C PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.160e-20
Identity = 74/268 (27.61%), Postives = 138/268 (51.49%), Query Frame = 1
Query:    1 TTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNLL-----FQIDKYRH------LSSYPEAIHQIAFADVVILNKVDLVSPERSGDSLDELEKEIHEINSLAHVIHSVRCQVDLSEVLNCRAYDATHVTRLEGLLEEHQYKSSQNLHDNNVRTLSIC-EPL----AVNLDKVRLWLEEILWD------------KKDGMD--VYRCKGVLSVKHSDQL-HTLQAVREIYEIVPARKWRTEENQMNKIVFIGHHLNQDILQDSFR 711
            T+G+A+PAP+A + W D+ L S+V +D IITV+D +++L       ID + H        +   A  Q+A AD +I+NK D +  E S + + +L++ + EINS+A +  +      +  +L+  AYD+    R+  +L+      +  +HD+ + T+ +   PL      N   ++ +L+ +LW             + DG D  V R KG++ ++  + +   +Q VR+ Y++ P +      N+  KIV IG +L ++ +++  R
Sbjct:  167 TSGIADPAPIAKMFWQDEGLNSSVYIDGIITVLDCEHILKCLDDISIDAHWHGDKVGLEGNLTIAHFQLAMADRIIMNKYDTI--EHSPEMVKQLKERVREINSIAPMFFTKYSDTPIQNLLDIHAYDS---VRISDILDSG--SGNGTIHDDRMGTIMLTFRPLKNEEEYNNKFIKQFLQPLLWKNFGAMTVLGGRRRDDGRDWEVQRTKGLILIEGENPIARVIQGVRDTYDVFPGK--YDGSNKECKIVLIGKYLEKESIEELLR 425          
The following BLAST results are available for this feature:
BLAST of CX675605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
CBWD1_RAT2.493e-3335.20COBW domain-containing protein 1 OS=Rattus norvegi... [more]
CBWD1_MOUSE1.047e-3134.69COBW domain-containing protein 1 OS=Mus musculus G... [more]
CBWD3_HUMAN1.975e-3033.33COBW domain-containing protein 3 OS=Homo sapiens G... [more]
CBWD5_HUMAN5.746e-3032.92COBW domain-containing protein 5 OS=Homo sapiens G... [more]
CBWD1_HUMAN7.505e-3032.92COBW domain-containing protein 1 OS=Homo sapiens G... [more]
CBWD2_HUMAN9.802e-3032.92COBW domain-containing protein 2 OS=Homo sapiens G... [more]
CBWD6_HUMAN2.852e-2932.51COBW domain-containing protein 6 OS=Homo sapiens G... [more]
CBWD7_HUMAN8.587e-2631.60Putative COBW domain-containing protein 7 OS=Homo ... [more]
YOG5_SCHPO1.283e-2133.59COBW domain-containing protein C15D4.05 OS=Schizos... [more]
YN8H_YEAST3.160e-2027.61Uncharacterized protein YNR029C OS=Saccharomyces c... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_63D11_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-63D11-G21-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675605 ID=CX675605; Name=CX675605; organism=Citrus sinensis; type=EST; length=785bp
ACCACTGGGTTAGCAAATCCTGCTCCTCTGGCATCTGTTCTTTGGTTGGA
TGACCAGCTGGAATCAGCTGTCAGGCTTGATTCTATTATCACTGTTGTGG
ATGCCAAAAATCTTCTTTTCCAGATTGATAAGTATCGTCACTTGTCTTCG
TATCCTGAAGCAATTCATCAAATAGCATTTGCTGATGTTGTGATTCTTAA
CAAGGTCGATTTAGTTTCTCCAGAGCGTTCTGGAGATTCTCTTGATGAAT
TGGAGAAGGAAATACATGAAATTAACTCCCTTGCCCATGTCATCCACTCT
GTTCGATGTCAAGTTGACCTGTCTGAAGTATTGAATTGTCGAGCATATGA
TGCCACACATGTCACTCGTCTAGAAGGACTGTTGGAGGAACACCAATATA
AATCTTCTCAGAATCTTCATGACAATAATGTGCGAACCTTGTCCATTTGT
GAACCACTGGCAGTTAATCTTGATAAGGTTCGCTTATGGCTTGAGGAGAT
TCTTTGGGATAAAAAAGATGGTATGGATGTGTACCGTTGCAAAGGGGTTT
TAAGTGTTAAACACTCCGATCAACTGCATACTTTGCAGGCTGTGAGGGAG
ATTTATGAGATTGTTCCAGCTCGAAAATGGAGAACAGAGGAGAATCAGAT
GAATAAGATAGTTTTTATAGGTCATCACCTGAATCAAGACATTCTTCAAG
ATTCCTTCAGAACTTGCACATTAGCAACTACATAGCTTATAGTGAGAAGC
AGTTTGAAGAGATTTGCCATCTTGAAGCTTCAATT
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