CN188023
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188023 vs. ExPASy Swiss-Prot
Match: TRPB2_ARCFU (Tryptophan synthase beta chain 2 OS=Archaeoglobus fulgidus GN=trpB2 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 5.940e-40 Identity = 75/110 (68.18%), Postives = 89/110 (80.91%), Query Frame = 3 Query: 438 EIPCQWYNVIADLSVKPPPPLHPKTFEPVKPEDLSPLFPDELIKQEASTDRFIDIPDEVLDIYRLWRPTPLIRAKRLEKILDTPARIYYKYEGVSPAGSHKPNTAVPQVY 767 E+P +WYNV+ DL PPPLHP T EPVKPEDL P+FP LI+QE S +R+I IP++V +IYR+WRPTPL+RA+RLEK L TPARIY+KYEG SP GSHKPNTAV Q Y Sbjct: 15 EMPKEWYNVLPDLPEPLPPPLHPATQEPVKPEDLEPIFPKGLIQQEMSGERWIRIPEDVREIYRIWRPTPLVRAERLEKALKTPARIYFKYEGASPPGSHKPNTAVAQAY 124
BLAST of CN188023 vs. ExPASy Swiss-Prot
Match: TRPB2_METAC (Tryptophan synthase beta chain 2 OS=Methanosarcina acetivorans GN=trpB2 PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.120e-38 Identity = 70/110 (63.64%), Postives = 90/110 (81.82%), Query Frame = 3 Query: 438 EIPCQWYNVIADLSVKPPPPLHPKTFEPVKPEDLSPLFPDELIKQEASTDRFIDIPDEVLDIYRLWRPTPLIRAKRLEKILDTPARIYYKYEGVSPAGSHKPNTAVPQVY 767 E+P +WYNV+ADL PPL P+T++P+ P+ L P+FP LI QE S+DR+IDIP+EVLD+YRLWRP+PL RA +LEK+L +PA+IYYKYEGVSPAGSHK NT++ Q Y Sbjct: 22 EMPKKWYNVLADLPSPIDPPLDPRTWQPISPDALEPIFPKALIMQEMSSDRYIDIPEEVLDVYRLWRPSPLFRAHQLEKVLKSPAKIYYKYEGVSPAGSHKTNTSIAQAY 131
BLAST of CN188023 vs. ExPASy Swiss-Prot
Match: TRPB2_METMA (Tryptophan synthase beta chain 2 OS=Methanosarcina mazei GN=trpB2 PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 5.560e-38 Identity = 70/110 (63.64%), Postives = 89/110 (80.91%), Query Frame = 3 Query: 438 EIPCQWYNVIADLSVKPPPPLHPKTFEPVKPEDLSPLFPDELIKQEASTDRFIDIPDEVLDIYRLWRPTPLIRAKRLEKILDTPARIYYKYEGVSPAGSHKPNTAVPQVY 767 E+P +WYNV++DL PPL P+T++P+ PE L P+F ELI+QE S+DR+IDIP E+LD+YRLWRP+PL RA +LEK L TPA+IYYKYEGVSPAGSHK NT++ Q Y Sbjct: 22 EMPKRWYNVLSDLPSPIDPPLDPRTWQPINPEALEPIFAKELIRQEMSSDRYIDIPAEILDVYRLWRPSPLFRAHQLEKDLKTPAKIYYKYEGVSPAGSHKTNTSIAQAY 131
BLAST of CN188023 vs. ExPASy Swiss-Prot
Match: TRPB2_THEMA (Tryptophan synthase beta chain 2 OS=Thermotoga maritima GN=trpB2 PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 5.204e-36 Identity = 72/112 (64.29%), Postives = 85/112 (75.89%), Query Frame = 3 Query: 432 PVEIPCQWYNVIADLSVKPPPPLHPKTFEPVKPEDLSPLFPDELIKQEASTDRFIDIPDEVLDIYRLWRPTPLIRAKRLEKILDTPARIYYKYEGVSPAGSHKPNTAVPQVY 767 P EIP WYNV+ADL K PPL P+T +P+ PE LS +FP LI+QE S +RFI+IP+ VL Y ++RPTPLIRA LE+ L TPARIYYKYEGVSP GSHKPNTA+ Q Y Sbjct: 9 PEEIPKHWYNVLADLPFKLDPPLDPETKQPISPEKLSVIFPMSLIEQEVSEERFIEIPEPVLKEYAVYRPTPLIRATFLEEYLQTPARIYYKYEGVSPTGSHKPNTAIAQAY 120
BLAST of CN188023 vs. ExPASy Swiss-Prot
Match: TRPB2_AQUAE (Tryptophan synthase beta chain 2 OS=Aquifex aeolicus GN=trpB2 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.851e-33 Identity = 68/110 (61.82%), Postives = 81/110 (73.64%), Query Frame = 3 Query: 438 EIPCQWYNVIADLSVKPPPPLHPKTFEPVKPEDLSPLFPDELIKQEASTDRFIDIPDEVLDIYRLWRPTPLIRAKRLEKILDTPARIYYKYEGVSPAGSHKPNTAVPQVY 767 EIP +W N++ L PPL P+T EPVKPE L +FP+ L++QE S +IDIP+EVLDIY LWRPTPL RAK LE+ L TPA+I+YK E VSP GSHKPNTAV Q Y Sbjct: 10 EIPKKWLNILPLLPEPLEPPLDPETMEPVKPEKLLAIFPEPLVEQEVSDKEWIDIPEEVLDIYSLWRPTPLHRAKNLEEFLGTPAKIFYKNESVSPPGSHKPNTAVAQAY 119
BLAST of CN188023 vs. ExPASy Swiss-Prot
Match: TRPB_THEAB (Tryptophan synthase beta chain OS=Thermosipho africanus (strain TCF52B) GN=trpB PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.263e-31 Identity = 65/111 (58.56%), Postives = 83/111 (74.77%), Query Frame = 3 Query: 438 EIPCQWYNVIADLSVKPPPPLHPKTFEPVKPEDLSPLFPDELIKQEAS-TDRFIDIPDEVLDIYRLWRPTPLIRAKRLEKILDTPARIYYKYEGVSPAGSHKPNTAVPQVY 767 E+P WYNV++DL K PPL P+T +P+ PE L +FP L++QE + TD+FIDIP+E+L Y ++RPTPLIRA LE+ L TPA+IYYKYEG SP GSHK NTA+ Q Y Sbjct: 11 EMPKVWYNVLSDLPFKLDPPLDPETNKPMSPEKLLKIFPAPLLEQEVNDTDKFIDIPEEILKEYAVYRPTPLIRANFLEEYLQTPAKIYYKYEGQSPTGSHKTNTALAQAY 121
BLAST of CN188023 vs. ExPASy Swiss-Prot
Match: TRPB2_AERPE (Tryptophan synthase beta chain 2 OS=Aeropyrum pernix GN=trpB2 PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.955e-31 Identity = 65/112 (58.04%), Postives = 82/112 (73.21%), Query Frame = 3 Query: 438 EIPCQWYNVIADLSVKPPPPLHPKTFEPVKPEDLSPLFPDELIKQEASTDRFIDIPDEVLDIYRLW--RPTPLIRAKRLEKILDTPARIYYKYEGVSPAGSHKPNTAVPQVY 767 E+P WYN++ DL + PPPL+PKT EPV P L+ LFP LI+QE S +R+I+IP EV + Y + RPTPL+RA LE+ L+TPA IYYKYEGV+P GSHK NTA+ Q Y Sbjct: 14 EVPTSWYNILPDLPEEVPPPLNPKTGEPVDPSALAKLFPKALIEQEVSRERYIEIPGEVHEAYISFARRPTPLLRAVNLERALNTPAEIYYKYEGVTPTGSHKINTALAQAY 125
BLAST of CN188023 vs. ExPASy Swiss-Prot
Match: TRPB_THELT (Tryptophan synthase beta chain OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=trpB PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.859e-31 Identity = 65/110 (59.09%), Postives = 79/110 (71.82%), Query Frame = 3 Query: 438 EIPCQWYNVIADLSVKPPPPLHPKTFEPVKPEDLSPLFPDELIKQEASTDRFIDIPDEVLDIYRLWRPTPLIRAKRLEKILDTPARIYYKYEGVSPAGSHKPNTAVPQVY 767 EIP WYNV++DL K PPL PKT +P+ P+ LS +FP LI+QE + R I IP+ VL+ Y ++RPTPL RA LE+ L TPARIYYKYEG SP GSHK NTA+ Q Y Sbjct: 11 EIPRYWYNVLSDLPFKLDPPLDPKTKQPISPDMLSAIFPMPLIEQEVTDKREIPIPEPVLEEYAVFRPTPLFRATYLEEFLQTPARIYYKYEGASPTGSHKTNTALAQAY 120
BLAST of CN188023 vs. ExPASy Swiss-Prot
Match: TRPB2_PYRKO (Tryptophan synthase beta chain 2 OS=Pyrococcus kodakaraensis GN=trpB2 PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.267e-30 Identity = 65/117 (55.56%), Postives = 84/117 (71.79%), Query Frame = 3 Query: 420 AVALPVEIPCQWYNVIADLSVKPPPPLHPKTFEPVKPEDLSPLFPDELIKQEASTDRFIDIPDEVLDIY-RLWRPTPLIRAKRLEKILDTPARIYYKYEGVSPAGSHKPNTAVPQVY 767 AV +IP +WYN++ DL PPL P+T EP++PE L +F +EL+KQE STDR+I+IP EV +IY ++ RPTPL RA LE+ L TPARIY+KYEG + GSHK NTA+ Q Y Sbjct: 3 AVLPDSKIPKRWYNILPDLPEPLAPPLDPETDEPMEPEKLLRIFAEELVKQEMSTDRYIEIPKEVREIYSKIGRPTPLFRATNLERALGTPARIYFKYEGATVTGSHKINTALAQAY 119
BLAST of CN188023 vs. ExPASy Swiss-Prot
Match: TRPB_THEGJ (Tryptophan synthase beta chain OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=trpB PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.621e-29 Identity = 63/117 (53.85%), Postives = 84/117 (71.79%), Query Frame = 3 Query: 420 AVALPVEIPCQWYNVIADLSVKPPPPLHPKTFEPVKPEDLSPLFPDELIKQEASTDRFIDIPDEVLDIY-RLWRPTPLIRAKRLEKILDTPARIYYKYEGVSPAGSHKPNTAVPQVY 767 AV +IP +WYN++ DL PPL P+T EP++PE L +F +EL+KQE ST+R+I+IP +V ++Y ++ RPTPL RA LEK L TPARIY+KYEG + GSHK NTA+ Q Y Sbjct: 3 AVLPDSKIPKRWYNILPDLPEPLAPPLDPETDEPIEPEKLLRIFAEELVKQEMSTERYIEIPKKVRELYAKIGRPTPLFRATNLEKALGTPARIYFKYEGATVTGSHKINTALAQAY 119 The following BLAST results are available for this feature:
BLAST of CN188023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188023 ID=CN188023; Name=CN188023; organism=Citrus sinensis; type=EST; length=767bpback to top |