CK939071

Overview
NameCK939071
Unique NameCK939071
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length829
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939071 vs. ExPASy Swiss-Prot
Match: BZR2_ARATH (Protein BRASSINAZOLE-RESISTANT 2 OS=Arabidopsis thaliana GN=BZR2 PE=1 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 6.666e-64
Identity = 149/277 (53.79%), Postives = 167/277 (60.29%), Query Frame = 3
Query:   96 MTSDGATSTSAA--------RRKPTWXXXXXXXXXXXXXXAIAAKIYTGSRAQGNYNLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKGTRPPPIDIASTSARVTXXXXXXXXXXXXXXXXXXXXXXXXXTR---------GDANNPSSLLPFLRN-AIPSSLPPLRISNSA--XXXXXXXXXXXXXXXXNWESM--------AKESMSALNYPFYAISAPASPI-HRQLYAPAATIHECDESDTSTVDSGHWISFKKFAP----SASGVATSPXXN 827
            MTSDGATSTSAA        RRKP+W              A+AAKIYTG RAQGNYNLPKHCDNNEVLKALC+EAGWVVEEDGTTYRKG +P P D+A +S+R T                         +          GD +N S++ PFLRN  IPSSLPPLRISNSA                   WES         AK+SM++LNYPFYA+SAPASP  HRQ +AP ATI ECDESD+STVDSGHWISF+KFA     SAS V TSP  N
Sbjct:    1 MTSDGATSTSAAAAAAAMATRRKPSWRERENNRRRERRRRAVAAKIYTGLRAQGNYNLPKHCDNNEVLKALCSEAGWVVEEDGTTYRKGHKPLPGDMAGSSSRATPYSSHNQSPLSSTFDSPILSYQVSPSSSSFPSPSRVGDPHNISTIFPFLRNGGIPSSLPPLRISNSAPVTPPVSSPTSRNPKPLPTWESFTKQSMSMAAKQSMTSLNYPFYAVSAPASPTHHRQFHAP-ATIPECDESDSSTVDSGHWISFQKFAQQQPFSASMVPTSPTFN 276          
BLAST of CK939071 vs. ExPASy Swiss-Prot
Match: BZR1_ARATH (Protein BRASSINAZOLE-RESISTANT 1 OS=Arabidopsis thaliana GN=BZR1 PE=1 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 7.370e-63
Identity = 146/277 (52.71%), Postives = 163/277 (58.84%), Query Frame = 3
Query:   96 MTSDGATSTSAA---------RRKPTWXXXXXXXXXXXXXXAIAAKIYTGSRAQGNYNLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKGTRPPPIDIASTSARVT--------XXXXXXXXXXXXXXXXXXXXXXXXXTRGDANN--PSSLLPFLRN-AIPSSLPPLRISNS--AXXXXXXXXXXXXXXXXNWES-------MAKESMSALNYPFYAISAPASPIHRQLYAPAATIHECDESDTSTVDSGHWISFKKFAP----SASGVATSPXXN 827
            MTSDGATSTSAA         RRKP+W              A+AAKIYTG RAQG+YNLPKHCDNNEVLKALC EAGWVVEEDGTTYRKG +P P +IA TS+RVT                                 +RG+ NN   S+  PFLRN  IPSSLP LRISNS                   NWES       +AK+SM++ NYPFYA+SAPASP HR  +   ATI ECDESD+STVDSGHWISF+KFA     SAS V TSP  N
Sbjct:    1 MTSDGATSTSAAAAAAAAAAARRKPSWRERENNRRRERRRRAVAAKIYTGLRAQGDYNLPKHCDNNEVLKALCVEAGWVVEEDGTTYRKGCKPLPGEIAGTSSRVTPYSSQNQSPLSSAFQSPIPSYQVSPSSSSFPSPSRGEPNNNMSSTFFPFLRNGGIPSSLPSLRISNSCPVTPPVSSPTSKNPKPLPNWESIAKQSMAIAKQSMASFNYPFYAVSAPASPTHRHQFHTPATIPECDESDSSTVDSGHWISFQKFAQQQPFSASMVPTSPTFN 277          
BLAST of CK939071 vs. ExPASy Swiss-Prot
Match: BEH2_ARATH (BES1/BZR1 homolog protein 2 OS=Arabidopsis thaliana GN=BEH2 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.071e-41
Identity = 109/257 (42.41%), Postives = 132/257 (51.36%), Query Frame = 3
Query:  108 GATSTSAARRKPTWXXXXXXXXXXXXXXAIAAKIYTGSRAQGNYNLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKGTRPPPIDIAST--------SARVTXXXXXXXXXXXXXXXXXXXXXXXXXTRGDANNPSS--LLPFLRN---AIPSSLPPLRISNSAXXXXXXXXXXXXXXXXNWESMAKE---SMSALNYPFYAISAPASPIHRQLYAPAATIHECDESDTSTV-DSGHWISFKKFAPSASGVATSPXXN 827
            G    S++ R PTW              AI AKIY+G RAQGNY LPKHCDNNEVLKALC EAGW+VE+DGTTYRKG +PP  DI+ T        S + +                         +R D  NPSS  LLPFL N   +IP++LPPLRISNSA                   S       S+  L +P +AISAP+SP  R  +    TI ECDES+  ++ DSG WI+F+  AP      TSP  N
Sbjct:    7 GGGGGSSSGRTPTWKERENNKKRERRRRAITAKIYSGLRAQGNYKLPKHCDNNEVLKALCLEAGWIVEDDGTTYRKGFKPPASDISGTPTNFSTNSSIQPSPQSSAFPSPAPSYHGSPVSSSFPSPSRYD-GNPSSYLLLPFLHNIASSIPANLPPLRISNSAPVTPPLSSPTSRGSKRKLTSEQLPNGGSLHVLRHPLFAISAPSSPTRRAGHQTPPTIPECDESEEDSIEDSGRWINFQSTAP------TSPTFN 256          
BLAST of CK939071 vs. ExPASy Swiss-Prot
Match: BEH1_ARATH (BES1/BZR1 homolog protein 1 OS=Arabidopsis thaliana GN=BEH1 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.400e-37
Identity = 98/231 (42.42%), Postives = 122/231 (52.81%), Query Frame = 3
Query:   96 MTSDGATSTSAARRKPTWXXXXXXXXXXXXXXAIAAKIYTGSRAQGNYNLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKGTRPPPIDIASTSARVTXXXXXXXXXXXXXXXXXXXXXXXXXTRGDANNPSS-LLPFLRN-AIPSSLPPLRISNSA-XXXXXXXXXXXXXXXXNWESMAKESMSALNYPFYAISAPASPIHRQLYAPAATIHECDESDTSTVDSGHWISFK 779
            MT+ G  ST+A  R PTW              AIAAKI+TG R+QGNY LPKHCDNNEVLKALC EAGW+V EDGTTYRKG+RP    +  +S +++                         TR D N  S+ L+P+L+N A   +L PLRISNSA                  W+S         N+P   +SAP+SP  R  +    +I ECDESD STVDS  W +F+
Sbjct:    1 MTASGGGSTAATGRMPTWKERENNKKRERRRRAIAAKIFTGLRSQGNYKLPKHCDNNEVLKALCLEAGWIVHEDGTTYRKGSRPTETTVPCSSIQLSPQSSAFQSPIPSYQASPSSSSYPSPTRFDPNQSSTYLIPYLQNLASSGNLAPLRISNSAPVTPPISSPRRSNPRLPRWQSS--------NFP---VSAPSSPTRRLHH--YTSIPECDESDVSTVDSCRWGNFQ 218          
BLAST of CK939071 vs. ExPASy Swiss-Prot
Match: BEH3_ARATH (BES1/BZR1 homolog protein 3 OS=Arabidopsis thaliana GN=BEH3 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.030e-20
Identity = 62/143 (43.36%), Postives = 73/143 (51.05%), Query Frame = 3
Query:  123 SAARRKPTWXXXXXXXXXXXXXXAIAAKIYTGSRAQGNYNLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKGTRP-PPIDI--ASTSARVTXXXXXXXXXXXXXXXXXXXXXXXXXTRGDANNPSSLLPFLRNA---IPSSLP 533
            ++  R PTW              AIAAKI+ G R  GN+ LPKHCDNNEVLKALC EAGW VE+DGTTYRKG +P   +D+   STSA                              GDAN   SL+P+L+N     PS LP
Sbjct:    2 TSGTRTPTWKERENNKRRERRRRAIAAKIFAGLRIHGNFKLPKHCDNNEVLKALCNEAGWTVEDDGTTYRKGCKPMDRMDLMNGSTSASPCSSYQHSPRASYNPSPSSSSFPSPTNPFGDAN---SLIPWLKNLSSNSPSKLP 141          
BLAST of CK939071 vs. ExPASy Swiss-Prot
Match: BEH4_ARATH (BES1/BZR1 homolog protein 4 OS=Arabidopsis thaliana GN=BEH4 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.716e-20
Identity = 46/76 (60.53%), Postives = 50/76 (65.79%), Query Frame = 3
Query:  123 SAARRKPTWXXXXXXXXXXXXXXAIAAKIYTGSRAQGNYNLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKGTRPP 350
            ++  R PTW              AIAAKI+TG R  GNY LPKHCDNNEVLKALC EAGW+VE DGTTYRKG   P
Sbjct:    2 TSGTRMPTWRERENNKRRERRRRAIAAKIFTGLRMYGNYELPKHCDNNEVLKALCNEAGWIVEPDGTTYRKGCSRP 77          
The following BLAST results are available for this feature:
BLAST of CK939071 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
BZR2_ARATH6.666e-6453.79Protein BRASSINAZOLE-RESISTANT 2 OS=Arabidopsis th... [more]
BZR1_ARATH7.370e-6352.71Protein BRASSINAZOLE-RESISTANT 1 OS=Arabidopsis th... [more]
BEH2_ARATH6.071e-4142.41BES1/BZR1 homolog protein 2 OS=Arabidopsis thalian... [more]
BEH1_ARATH1.400e-3742.42BES1/BZR1 homolog protein 1 OS=Arabidopsis thalian... [more]
BEH3_ARATH2.030e-2043.36BES1/BZR1 homolog protein 3 OS=Arabidopsis thalian... [more]
BEH4_ARATH7.716e-2060.53BES1/BZR1 homolog protein 4 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004434_F06 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650003_IIIF_F06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939071 ID=CK939071; Name=CK939071; organism=Citrus sinensis; type=EST; length=829bp
GGGGGAGAAAAGATTCNNCTACAGCGAAGGGAAAGCGTATTCCTCGTGGC
CATTTTAGCCTTTTAGGCCTAGAGAGAGGCGGGCTTCGTCGGAAAATGAC
GTCAGACGGTGCCACATCGACGTCGGCAGCTCGGAGGAAGCCGACGTGGA
GGGAGAGGGAGAACAATAGGAGGAGAGAGAGAAGGAGAAGAGCTATAGCC
GCTAAGATTTACACTGGGTCGAGGGCTCAGGGAAACTATAATTTGCCCAA
GCACTGTGATAATAATGAAGTTTTGAAAGCTCTATGTGCAGAAGCTGGCT
GGGTTGTTGAGGAAGACGGCACCACTTATCGCAAAGGAACGAGGCCTCCT
CCTATTGATATAGCAAGTACTTCAGCCAGAGTTACCCCTTACTCTTCCCA
GAATCCAAGTCCTTTATCTTCATCCTTTCCGAGCCCAGTTCCATCATATC
CGACTAGTCCTACTCGTGGTGATGCCAACAACCCATCTAGCCTCCTCCCG
TTCCTCCGAAATGCAATCCCTTCATCACTTCCTCCTCTTCGGATCTCAAA
CAGTGCCCCAGTGACTCCACCCTTGTCATCCCCTACAAAAAGTAAACCAA
TTCCCAATTGGGAGTCTATGGCCAAAGAATCCATGTCTGCCCTCAATTAC
CCTTTCTACGCTATTTCTGCCCCAGCTAGTCCAATTCACCGTCAACTGTA
TGCTCCAGCAGCTACGATACATGAATGCGATGAATCTGATACATCCACTG
TTGACTCTGGTCACTGGATAAGCTTCAAAAAATTTGCACCTTCTGCTTCT
GGGGTGGCCACCTCTCCNNNNNTCAATCT
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