CX675601

Overview
NameCX675601
Unique NameCX675601
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length734
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3979 contig Csv1_Contig3979:1154..1893. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX675601 vs. ExPASy Swiss-Prot
Match: KPYC_SOLTU (Pyruvate kinase, cytosolic isozyme OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.809e-28
Identity = 66/156 (42.31%), Postives = 93/156 (59.62%), Query Frame = -3
Query:  214 CM*AEKVFNQDLYFKKTVKCVGEPMTH*ESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTTPVLSVVIPRLKTNQLKWSFSGACEARQSLIVRGLFPMLADPRHPAESTNATNESVLKVALDHGKASGVIKSHDRVVVCQKVGDASVVKI 681
            C+ AE   + +  FK+ ++C   PM+  ES+ASSAVR A K +A +I+  T  G  A+L+AKYRP  P+LSVV+P L T+   WS S    AR SL+ RGL P+L +    A  + +T E +L+ AL      G+ K  D VV   ++G ASV+KI
Sbjct:  352 CIEAESSLDNEAIFKEMIRCTPLPMSPLESLASSAVRTANKARAKLIVVLTRGGSTAKLVAKYRPAVPILSVVVPVLTTDSFDWSISDETPARHSLVYRGLIPLLGEGSAKATDSEST-EVILEAALKSAVTRGLCKPGDAVVALHRIGSASVIKI 506          
BLAST of CX675601 vs. ExPASy Swiss-Prot
Match: KPYC_TOBAC (Pyruvate kinase, cytosolic isozyme OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.185e-26
Identity = 68/160 (42.50%), Postives = 93/160 (58.13%), Query Frame = -3
Query:  202 CM*AEKVFNQDLYFKKTVKCVGEPMTH*ESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTTPVLSVVIPRLKTNQLKWSFSGACEARQSLIVRGLFPMLADPRHPAESTNATNESVLKVALDHGKASGVIKSHDRVVVCQKVGDASVVKIIELE 681
            C+ AE   +    FK+ +     PM+  ES+ASSAVR A   KA++I+  T  G  A+L+AKYRP  P+LSVV+P +KT+   W+ S    AR SLI RGL P+L      A    +T E+ L  AL H K  G+ K  D VV   +VG ASV+KI+ ++
Sbjct:  350 CIEAESTIDYPDVFKRIMSNAPVPMSPLESLASSAVRTANSAKAALILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDSFDWTCSDESPARHSLIFRGLVPVLHAGSARASHEESTEEA-LDFALQHAKTKGLCKQGDSVVALHRVGTASVIKIVTVK 508          
BLAST of CX675601 vs. ExPASy Swiss-Prot
Match: KPYC_SOYBN (Pyruvate kinase, cytosolic isozyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.918e-25
Identity = 65/156 (41.67%), Postives = 89/156 (57.05%), Query Frame = -3
Query:  214 CM*AEKVFNQDLYFKKTVKCVGEPMTH*ESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTTPVLSVVIPRLKTNQLKWSFSGACEARQSLIVRGLFPMLADPRHPAESTNATNESVLKVALDHGKASGVIKSHDRVVVCQKVGDASVVKI 681
            C+ AE   +    FK+ ++    PM+  ES+ASSAVR A K KA +I+  T  G  A+L+AKYRP  P+LSVV+P L T+   W+ S    AR SLI RGL P+L +    A    +T E +L+ AL       + K  D VV   ++G ASV+KI
Sbjct:  353 CIEAESSLDYGAIFKEMIRSTPLPMSPLESLASSAVRTANKAKAKLIVVLTRGGSTAKLVAKYRPAVPILSVVVPVLSTDSFDWTCSDETPARHSLIYRGLIPILGEGSAKATDAEST-EVILEAALKSATERALCKPGDAVVALHRIGAASVIKI 507          
BLAST of CX675601 vs. ExPASy Swiss-Prot
Match: KPYC_ARATH (Probable pyruvate kinase, cytosolic isozyme OS=Arabidopsis thaliana GN=At4g26390 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.355e-22
Identity = 61/160 (38.12%), Postives = 93/160 (58.13%), Query Frame = -3
Query:  202 CM*AEKVFNQDLYFKKTVKCVGEPMTH*ESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTTPVLSVVIPRLKTNQLKWSFSGACEARQSLIVRGLFPMLADPRHPAESTNATNESVLKVALDHGKASGVIKSHDRVVVCQKVGDASVVKIIELE 681
            C+ AE   +    FK+ +     PM+  ES+ASSAVR A   +A++++  T  G  ARL+AKYRP  P+LSVV+P + ++   W+ S    AR SLI RGL P+L      A S + + E  L+ A ++GK   + K+ D VV   + G+A V+KI+ ++
Sbjct:  339 CVEAESTLDYGDIFKRIMLHAAVPMSPMESLASSAVRTATSSRATLMMVLTRGGSTARLVAKYRPGIPILSVVVPEITSDSFDWACSNEAPARHSLIYRGLVPVLYAGSARA-SIDESTEETLEFASEYGKKKQLCKTGDSVVALFRTGNAIVIKILTVK 497          
The following BLAST results are available for this feature:
BLAST of CX675601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
KPYC_SOLTU4.809e-2842.31Pyruvate kinase, cytosolic isozyme OS=Solanum tube... [more]
KPYC_TOBAC1.185e-2642.50Pyruvate kinase, cytosolic isozyme OS=Nicotiana ta... [more]
KPYC_SOYBN2.918e-2541.67Pyruvate kinase, cytosolic isozyme OS=Glycine max ... [more]
KPYC_ARATH1.355e-2238.13Probable pyruvate kinase, cytosolic isozyme OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_63D07_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-63D07-G13-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675601 ID=CX675601; Name=CX675601; organism=Citrus sinensis; type=EST; length=734bp
TTTTTCAAAAAAACTAAAATATCTTTCCCCGACTTCCAGTCTGGGAAGTT
TCATAATTACTAGTGCGCTTTAAATACAATTTGGCCATAATAAAAACCTG
GAGATATACCTCACAGGTGCCAGCAACATGGTCCACCACCGTTTTCAAAA
AATTAGGACAAAATAATGCCACAAAACATGGGCAGTACAAGCATTTTAGT
CTTCGAGCTCAATAATCTTAACCACAGATGCATCGCCGACTTTCTGGCAA
ACAACAACTCGATCATGCGACTTTATAACTCCTGAAGCCTTCCCGTGATC
AAGAGCAACCTTTAGAACCGACTCATTCGTGGCATTTGTAGACTCCGCAG
GATGTCGAGGATCAGCAAGCATAGGGAAGAGACCTCTCACAATGAGTGAT
TGCCTTGCCTCACAGGCTCCACTAAAGCTCCATTTTAGTTGATTTGTCTT
AAGGCGTGGGATCACAACTGATAGAACCGGCGTTGTTGGCCTGTACTTGG
CAATCAATCTTGCAGCTCTTCCTGATGAAGTGAAGCATATAATAACAGAT
GCCTTCACTTTAATGGCTGCCCTTACCGCTGAAGATGCAATAGACTCTTA
GTGGGTCATTGGCTCTCCAACGCATTTGACGGTCTTCTTGAAATAAAGGT
CCTGGTTGAAAACCTTCTCTGCCTACATGCATTAGGGAAAAAAGCGATAA
CATTGTACAACGAACATGAAGAAGGAAAAACTTA
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