CK939058
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939058 vs. ExPASy Swiss-Prot
Match: YJBQ_SALTY (UPF0047 protein yjbQ OS=Salmonella typhimurium GN=yjbQ PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.389e-32 Identity = 71/139 (51.08%), Postives = 92/139 (66.19%), Query Frame = 3 Query: 213 WAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDARDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGIWLCEHRDAPTPRKVVITLNG 629 W Q+T+TL RG HLIT +I +++ L + GL HL LLHTSASLT+NEN D R D E K VP+ +A ++H EG DDMP+HIKSS+ G +L +P+ G+L +GTWQGIWL EHR PRK++ TL G Sbjct: 2 WYQRTITLSEKPRGFHLITDEITDKLS-GLPPVETGLLHLLLLHTSASLTLNENCDPTVRADMERHFLKTVPD--NAAYEHDYEGADDMPSHIKSSVLGVSLLLPVRQGRLQLGTWQGIWLGEHRIHGGPRKIIATLQG 137
BLAST of CK939058 vs. ExPASy Swiss-Prot
Match: YJBQ_SALTI (UPF0047 protein yjbQ OS=Salmonella typhi GN=yjbQ PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.389e-32 Identity = 71/139 (51.08%), Postives = 92/139 (66.19%), Query Frame = 3 Query: 213 WAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDARDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGIWLCEHRDAPTPRKVVITLNG 629 W Q+T+TL RG HLIT +I +++ L + GL HL LLHTSASLT+NEN D R D E K VP+ +A ++H EG DDMP+HIKSS+ G +L +P+ G+L +GTWQGIWL EHR PRK++ TL G Sbjct: 2 WYQRTITLSEKPRGFHLITDEITDKLS-GLPPVETGLLHLLLLHTSASLTLNENCDPTVRADMERHFLKTVPD--NAAYEHDYEGADDMPSHIKSSVLGVSLLLPVRQGRLQLGTWQGIWLGEHRIHGGPRKIIATLQG 137
BLAST of CK939058 vs. ExPASy Swiss-Prot
Match: YJBQ_ECOLI (UPF0047 protein yjbQ OS=Escherichia coli (strain K12) GN=yjbQ PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.549e-31 Identity = 68/139 (48.92%), Postives = 90/139 (64.75%), Query Frame = 3 Query: 213 WAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDARDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGIWLCEHRDAPTPRKVVITLNG 629 W QKT+TL RG HL+T +I+ ++A D+ GL HL L HTSASLT+NEN D R D E F + VP+ + ++H EG DDMP+HIKSSM G +L +P+ G++ GTWQGIWL EHR R+++ TL G Sbjct: 2 WYQKTLTLSAKSRGFHLVTDEILNQLA-DMPRVNIGLLHLLLQHTSASLTLNENCDPTVRHDMERFFLRTVPDNGN--YEHDYEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIWLGEHRIHGGSRRIIATLQG 137
BLAST of CK939058 vs. ExPASy Swiss-Prot
Match: YJBQ_ECO57 (UPF0047 protein yjbQ OS=Escherichia coli O157:H7 GN=yjbQ PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.549e-31 Identity = 68/139 (48.92%), Postives = 90/139 (64.75%), Query Frame = 3 Query: 213 WAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDARDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGIWLCEHRDAPTPRKVVITLNG 629 W QKT+TL RG HL+T +I+ ++A D+ GL HL L HTSASLT+NEN D R D E F + VP+ + ++H EG DDMP+HIKSSM G +L +P+ G++ GTWQGIWL EHR R+++ TL G Sbjct: 2 WYQKTLTLSAKSRGFHLVTDEILNQLA-DMPRVNIGLLHLLLQHTSASLTLNENCDPTVRHDMERFFLRTVPDNGN--YEHDYEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIWLGEHRIHGGSRRIIATLQG 137
BLAST of CK939058 vs. ExPASy Swiss-Prot
Match: YE72_SCHPO (UPF0047 protein C4A8.02c OS=Schizosaccharomyces pombe GN=SPAC4A8.02c PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.884e-31 Identity = 68/138 (49.28%), Postives = 96/138 (69.57%), Query Frame = 3 Query: 219 QKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDARDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGIWLCEHRDAPTPRKVVITLNGI 632 Q+ +TL +G ++IT +VK++ + L F G + F+ HTSA+LTINEN+D+D R D L+KIVPE SA ++HT EG DDMPAH+KSS+ G +LT+PIT+G+L++GTWQ I L E R P R +V T+ G+ Sbjct: 5 QRIITLDRRSKGFYIITNDLVKKLPE-LKSFSSGTVNFFIQHTSAALTINENWDADTRADMNDILDKIVPE--SAGYRHTAEGLDDMPAHVKSSLIGPSLTVPITNGKLSLGTWQDIQLAEFRRQPHSRTIVCTIIGL 139
BLAST of CK939058 vs. ExPASy Swiss-Prot
Match: Y1880_SYNY3 (UPF0047 protein sll1880 OS=Synechocystis sp. (strain PCC 6803) GN=sll1880 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.210e-21 Identity = 57/141 (40.43%), Postives = 83/141 (58.87%), Query Frame = 3 Query: 210 RWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDARDDTETFLNKIVPE-GRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGIWLCEHRDAPTPRKVVITLNG 629 R Q+ + + + H KI + S K GL +F+ HTSASL I EN D D D F ++VPE GR ++H+ EG DDMPAHI+S++ + IPI +G+L +GTWQG++L EHR P R+V++ ++G Sbjct: 9 RQHQEILVIATQGKSLHNFNSKIQAVVQH--SGVKTGLCTVFVRHTSASLIIQENADPDVLTDLAIFFAQLVPEDGRR--YRHSTEGLDDMPAHIRSALTKTSEHIPIVNGRLGLGTWQGVFLWEHRQRPHQREVIVHVSG 145
BLAST of CK939058 vs. ExPASy Swiss-Prot
Match: Y1081_METJA (UPF0047 protein MJ1081 OS=Methanocaldococcus jannaschii GN=MJ1081 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.407e-16 Identity = 52/123 (42.28%), Postives = 75/123 (60.98%), Query Frame = 3 Query: 264 ITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDARDDTETFLNKIVPEGRSAPWKHT-LEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGIWLCEHRDAPTPRKVVITLNG 629 ITP I+ I++ S+ K G+A +++ HT+A +TINEN D + D FL+ ++P+ W T LEG D AHIKSS+ GC+ TI I DG+ +GTWQGI+ E D P R+ + + G Sbjct: 23 ITPYIISAISE--SKVKDGIAVIYVPHTTAGITINENADPSVKHDIINFLSHLIPKN----WNFTHLEGNSD--AHIKSSLVGCSQTIIIKDGKPLLGTWQGIFFAEF-DGPRRREFYVKIIG 136
BLAST of CK939058 vs. ExPASy Swiss-Prot
Match: YUGU_BACSU (UPF0047 protein yugU OS=Bacillus subtilis GN=yugU PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.965e-11 Identity = 42/122 (34.43%), Postives = 64/122 (52.46%), Query Frame = 3 Query: 276 IVKEIAQDLSE--FKCGLAHLFLLHTSASLTINENYDSDARDDTETFLNKIVPEGRSAPWKHTLEG--PDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGIWLCEHRDAPTPRKVVITLNG 629 I +E+ L E G A ++ HT+A +TINEN D D + D +++ P W+H L+ + AH+KSS G + + + +G+L +GTWQGI+ CE D P R I + G Sbjct: 18 ITREVEAFLQETGITSGAALIYCPHTTAGITINENADPDVKKDMLRRFDEVYP------WEHELDRHMEGNTAAHMKSSTVGASQHVIVENGRLILGTWQGIYFCEF-DGPRTRTCYIKMMG 132 The following BLAST results are available for this feature:
BLAST of CK939058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK939058 ID=CK939058; Name=CK939058; organism=Citrus sinensis; type=EST; length=850bpback to top |