CK939051

Overview
NameCK939051
Unique NameCK939051
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939051 vs. ExPASy Swiss-Prot
Match: YLX5_SCHPO (UNC93-like protein C922.05c OS=Schizosaccharomyces pombe GN=SPAC922.05c PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.190e-49
Identity = 106/288 (36.81%), Postives = 161/288 (55.90%), Query Frame = 2
Query:    5 SYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTYIAFMCFMSAGAALSLAILPPSRVIRDDGTRCTNIKYSKVSTEAIEILK-LFRNWKMLLLFPAAWASNFFYSYQFNNVNGLMFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKR----LDFKTSGNDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYXGVQSXXXXXXXXXXTHKVSLLSQLIINWSL 853
            SYP    K  YI++FW IFN+G V+G ++P     H +   SV D TY  F+  M+ G+AL+L ++ P + +++DG      K      E + +++ L++ + +LLLFP  ++SN+F +YQFN+ N   FN+RTR LNN+ YW AQ++GS      +D+   +   R  VG G+V +    IWGGGLA QL Y+     +      DF   G  + G   LY  YG+LDA+FQS  YW+IG+L++D+  L+ Y GFY  +QS          T  +  ++     W+L
Sbjct:  175 SYPREENKARYIAIFWGIFNLGAVIGSIVPLAQTMH-SSVNSVGDGTYAGFIVLMAVGSALALFMVSPEKTVKEDGKFVHIEKSMGWKKELLGLVQTLYKEYWVLLLFPMFFSSNWFTTYQFNDFNLAYFNIRTRSLNNLLYWFAQIMGSAVAALFLDWQRFNRVIRARVGWGLVFVLICVIWGGGLAFQLKYTRKSVAESDFVVTDFTHRG--YTGYAFLYIFYGMLDAIFQSYAYWIIGSLSNDTNKLAVYMGFYKSLQSAGAAITYRMDTLNIPYMNYFASCWAL 459          
BLAST of CK939051 vs. ExPASy Swiss-Prot
Match: YEL4_SCHPO (Uncharacterized membrane protein C6F6.04c OS=Schizosaccharomyces pombe GN=SPAC6F6.04c PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.634e-28
Identity = 91/283 (32.16%), Postives = 130/283 (45.94%), Query Frame = 2
Query:    5 SYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTYIAFMCFMSAGAALS-LAILPPSRVIRDDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNFFYSYQFNNVNGLMFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGL---ASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYXGVQSXXXXXXXXXXTHKVSLLSQLII 841
            SY  A +K  +I+  W+I   G  VG  I F +NYH T    V    YI F+  M+    L+ L I  PS V + DGT   +        E   + +  ++W++L L PA++AS    ++Q +++N   F+LRTR LNNV +W  Q         ++D      RTRG++G+ I A+   A   G L    S+    HD  P  LD+   G  + G  VLY   G+        V W I  L+ D +  +RY G Y G Q+             VS L Q II
Sbjct:  142 SYSCANQKSQFIATQWTILAFGSTVGSFIAFGINYHSTST-GVPMAVYIIFIIIMACAVLLAILFIKSPSDVRKSDGTSALSPSNKTFGQELWGLFEAAKDWRLLCLLPASFASQSTIAWQ-SHLNSYYFSLRTRSLNNVLFWVIQFFVPYLFTLILDAKALKRRTRGIIGLTIQAVVIMATLSGELGWIVSKHIDLHDTSPD-LDWTQRG--YGGALVLYLLMGIQYGSSIVSVQWCISLLSSDPDKYARYAGLYKGTQAAGMCVSFGIDAAGVSFLGQGII 419          
The following BLAST results are available for this feature:
BLAST of CK939051 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
YLX5_SCHPO2.190e-4936.81UNC93-like protein C922.05c OS=Schizosaccharomyces... [more]
YEL4_SCHPO3.634e-2832.16Uncharacterized membrane protein C6F6.04c OS=Schiz... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004434_H03 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650003_IIIF_H03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939051 ID=CK939051; Name=CK939051; organism=Citrus sinensis; type=EST; length=856bp
GGGTTCGTATCCAACTGCTACCCGTAAAGGAACCTATATCTCTCTGTTTT
GGAGTATCTTTAACATGGGTGGTGTCGTTGGTGGCCTCATTCCTTTCATC
ATGAATTATCACCGTACTGATGCTGAAAGTGTCAATGACAAAACTTACAT
TGCATTCATGTGTTTCATGTCAGCCGGTGCTGCTCTTTCACTTGCAATCT
TGCCTCCTAGTCGTGTGATTAGAGATGATGGTACCCGATGCACCAACATT
AAGTATTCAAAAGTCTCCACCGAGGCCATTGAGATTTTGAAACTCTTTCG
TAACTGGAAGATGCTTCTTCTCTTCCCTGCTGCATGGGCTAGCAACTTCT
TCTACAGTTACCAGTTCAACAACGTTAATGGGTTGATGTTCAATTTGAGG
ACTAGAGGATTGAACAATGTCTTCTACTGGGGTGCTCAAATGTTGGGATC
AGTTGGAATTGGGTACGTGATGGACTTCAGTTTCCAAAGTCTAAGGACAA
GAGGTTTAGTTGGAATTGGGATCGTTGCTTTATTTGGGACTGCAATTTGG
GGTGGTGGCCTTGCCAGCCAGTTGAATTACTCTCATGATGATCCCCCTAA
ACGATTGGATTTCAAAACCTCCGGCAATGATTTTGCGGGACCATTTGTTT
TGTATTTCAGCTATGGGTTACTTGATGCCATGTTTCAAAGCATGGTTTAT
TGGGTGATTGGAGCGCTGGCTGATGATTCTGAGACCCTCAGCAGGTATAC
CGGGTTCTATAANGGAGTGCAAAGTGCGGGAGCTGCAGTCGCTTNNNAAG
TTGGCACACACAAGGTCTCCTTGCTCTCTCAGTTGATCATAAATTGGTCA
CTTACT
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