CK939045

Overview
NameCK939045
Unique NameCK939045
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length590
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK939045 vs. ExPASy Swiss-Prot
Match: RRFC_SPIOL (Ribosome-recycling factor, chloroplastic OS=Spinacia oleracea GN=RRF PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.457e-12
Identity = 33/38 (86.84%), Postives = 37/38 (97.37%), Query Frame = 1 
Query:    4 EKLQNEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 117
            EKL+ EKKLSEDNVKDLS+DLQKLTDEYMKK++SIYKQ
Sbjct:  226 EKLEKEKKLSEDNVKDLSADLQKLTDEYMKKVESIYKQ 263
The following BLAST results are available for this feature:
BLAST of CK939045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
RRFC_SPIOL5.457e-1286.84Ribosome-recycling factor, chloroplastic OS=Spinac... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004435_A02 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650003_IVF_A02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939045 ID=CK939045; Name=CK939045; organism=Citrus sinensis; type=EST; length=590bp
GGGGAAAAACTTCAGAACGAGAAGAAGCTCTCTGAAGACAATGTGAAGGA
CTTGTCAAGTGATTTACAGAAACTAACAGATGAGTATATGAAGAAGATTG
ATAGCATCTACAAACAGAAAGAGAAGGAGTTGTTGAAGGTTTAATGATTG
TTTACACACAAATGTAATGGTGAGCTCTCTAGTGAATCTCAGAATGCACT
CTTTATTTTTTGGTTTGCCCATAGAATGGCATTTTTTGATACTAATGGGA
GACACGGGTGGATATTTTGTTATGAAATGAAATGTGGAAATTAGTTATTC
TAGACTCTTTGTAAAAATTGTCTGTATAGCAACCTGTGACCTTATTTACT
GGGAACACTGAAGAGTGACCACGGTACGAGTAGGACCATTATAAATTGTA
ATGTCATGCTAAAGCACTGTGATGTTACTGCTTAATGGCGGGAACTGCTG
GCTGATATTCGTTGTTTTCAAAGTATGACCCATTTTACCTGAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAA
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