CK939042
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939042 vs. ExPASy Swiss-Prot
Match: TM165_RAT (Transmembrane protein 165 OS=Rattus norvegicus GN=Tmem165 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.011e-36 Identity = 90/212 (42.45%), Postives = 119/212 (56.13%), Query Frame = 2 Query: 299 SGLGVFDAFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWMSDPKSGQXXXXXXXXXXXX-----------------SGQGKXXXXXXXXXXXXPIFLESFILTFLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSLAVVGGSMLASKISQRTV 883 + LG AF+A+ S+IIVSE+GD+TF IAA+MAMR+ + TVL+GA+ AL +MT LS G +I R +T +T L+A FG+R+L P GQ +G PIF+++ LTFLAEWGDRSQ+ TI LA ++ GVAVG T+GH +CT LAV+GG M+A KIS RTV Sbjct: 89 ANLGFIHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALALMTCLSVLFG-YATTVIPRVYTYYVSTALFAIFGIRMLREGLKMSPDEGQEELEEVQAELKKKDEEFQRTKLLNGPDVETGTSTAIPQKKWLHFISPIFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTV 299
BLAST of CK939042 vs. ExPASy Swiss-Prot
Match: TM165_MOUSE (Transmembrane protein 165 OS=Mus musculus GN=Tmem165 PE=2 SV=2) HSP 1 Score: 154.066 bits (388), Expect = 1.011e-36 Identity = 90/212 (42.45%), Postives = 119/212 (56.13%), Query Frame = 2 Query: 299 SGLGVFDAFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWMSDPKSGQXXXXXXXXXXXX-----------------SGQGKXXXXXXXXXXXXPIFLESFILTFLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSLAVVGGSMLASKISQRTV 883 + LG AF+A+ S+IIVSE+GD+TF IAA+MAMR+ + TVL+GA+ AL +MT LS G +I R +T +T L+A FG+R+L P GQ +G PIF+++ LTFLAEWGDRSQ+ TI LA ++ GVAVG T+GH +CT LAV+GG M+A KIS RTV Sbjct: 89 TNLGFIHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALALMTCLSVLFG-YATTVIPRVYTYYVSTALFAIFGIRMLREGLKMSPDEGQEELEEVQAELKKKDEEFQRTKLLNGPDVETGTSTAIPQKKWLHFISPIFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTV 299
BLAST of CK939042 vs. ExPASy Swiss-Prot
Match: TM165_HUMAN (Transmembrane protein 165 OS=Homo sapiens GN=TMEM165 PE=1 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.011e-36 Identity = 91/213 (42.72%), Postives = 120/213 (56.34%), Query Frame = 2 Query: 299 SGLGVFDAFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWMSDPKSGQXXXXXXXXXXXX------------------SGQGKXXXXXXXXXXXXPIFLESFILTFLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSLAVVGGSMLASKISQRTV 883 + LG AF+A+ S+IIVSE+GD+TF IAA+MAMR+ + TVL+GA+ AL +MT LS G +I R +T +TVL+A FG+R+L P GQ +G PIF+++ LTFLAEWGDRSQ+ TI LA ++ GVAVG T+GH +CT LAV+GG M+A KIS RTV Sbjct: 89 TNLGFIHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTCLSVLFG-YATTVIPRVYTYYVSTVLFAIFGIRMLREGLKMSPDEGQEELEEVQAELKKKDEEFQRTKLLNGPGDVETGTSITVPQKKWLHFISPIFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTV 300
BLAST of CK939042 vs. ExPASy Swiss-Prot
Match: Y615_SYNY3 (UPF0016 membrane protein sll0615 OS=Synechocystis sp. (strain PCC 6803) GN=sll0615 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 8.287e-31 Identity = 81/188 (43.09%), Postives = 110/188 (58.51%), Query Frame = 2 Query: 320 AFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWMSDPKSGQXXXXXXXXXXXXSGQGKXXXXXXXXXXXXPIFLESFILTFLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSLAVVGGSMLASKISQRTV 883 AF A +I VSE+GD+TF IA ++AMR+P+ VL G + L MT+LS +G+I L +R + N A L+ FG +LL+ A + SG+ K I +ESF LTF+AEWGDR+QIATIALA NA GV+ GA +GHTIC +AV+GG +A +IS++TV Sbjct: 4 AFTAGLLLITVSELGDKTFFIAMILAMRYPRRWVLVGVVGGLAAMTILSVLMGQIFTFLPTR-YINYAEVALFLIFGTKLLWDA-RRIKATANLEEMEDAEKAIASGEKKLKIVPRGWG----IVVESFALTFVAEWGDRTQIATIALAASNNAWGVSAGAILGHTICAVIAVMGGKFVAGRISEKTV 185
BLAST of CK939042 vs. ExPASy Swiss-Prot
Match: YD68_SCHPO (UPF0016 membrane protein C17G8.08c OS=Schizosaccharomyces pombe GN=SPAC17G8.08c PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.257e-28 Identity = 79/218 (36.24%), Postives = 110/218 (50.46%), Query Frame = 2 Query: 320 AFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAW--MSDPKSGQXXXXXXXXXXXXSG----------------------------QGKXXXXXXXXXXXXPIFLESFILTFLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSLAVVGGSMLASKISQRTV 883 + I S SMI EIGD+TFI+AAL+A + + TV +G+ SALF+MT+L LG P L RK T+ VL+ FG+++L A M +S +G Q K P+F+++F LTF++EWGDRSQIATIA+A N GV +GA +GH CT+LAV+ G +++KI V Sbjct: 49 SLIFSISMIFGCEIGDKTFIVAALLAFENSRLTVFAGSYSALFIMTLLGVLLGHAAPLLFPRKLTDILGGVLFVIFGIKMLMEAKEVMDSKESMSDEFQNVRNEIAANGPIDQLLEEGAAPSHYTGHRSRSGHTLMSQLKSKGRNVMATLFSPLFIKAFALTFVSEWGDRSQIATIAMAASDNVYGVFMGANVGHACCTALAVISGKYISTKIKVHKV 266
BLAST of CK939042 vs. ExPASy Swiss-Prot
Match: YB37_YEAST (UPF0016 membrane protein YBR187W OS=Saccharomyces cerevisiae GN=YBR187W PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.372e-24 Identity = 75/216 (34.72%), Postives = 109/216 (50.46%), Query Frame = 2 Query: 320 AFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFF-------GLRLLYIAWMSDP---------------------KSGQXXXXXXXXXXXXSGQGKXXXXXXXXXXXXPIFLESFILTFLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSLAVVGGSMLASKISQRTV 883 +F+ S SMI +SEIGD+TF+IAALMAMRH + V S A ++L +MT+LS +G +S ++T A +L+ F GL + A + + K G + P++++ F++ FL E GDRSQI+ IA+AT + V GA IGH IC+ LAVVGG +LA++IS RT+ Sbjct: 41 SFLMSVSMIGLSEIGDKTFLIAALMAMRHKRVLVFSAAATSLAIMTILSGVVGHSAVAFLSERYTAFFAGILFLVFGYKLTMEGLEMSKDAGVEEEMAEVEEEIAIKDMNQDMDDVEKGGDTAYDKQLKNASIGKKIVHRIRELASFMFSPVWVQIFLMVFLGELGDRSQISIIAMATDSDYWYVIAGAVIGHAICSGLAVVGGKLLATRISIRTI 256 The following BLAST results are available for this feature:
BLAST of CK939042 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK939042 ID=CK939042; Name=CK939042; organism=Citrus sinensis; type=EST; length=888bpback to top |