CK939033

Overview
NameCK939033
Unique NameCK939033
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939033 vs. ExPASy Swiss-Prot
Match: CHAC2_DANRE (Cation transport regulator-like protein 2 OS=Danio rerio GN=chac2 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.059e-28
Identity = 69/158 (43.67%), Postives = 91/158 (57.59%), Query Frame = 3
Query:  231 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAM 704
            WVFGYGSL+W   F Y++K +GF+K + R F     DHRG P  P R  TL +  E   WGVAY +  G E+E    EYL+ RE        V F+ + E  QP +   +++  + D   N  YLGPAPLE +A+QI  +VGP G N DYLF+L  A+
Sbjct:    2 WVFGYGSLIWKVDFPYEDKRVGFVKGFSRRFWQGSTDHRGVPGKPGRVVTLIEDPEGCVWGVAYKLPSGQEQE--VKEYLDYREKGGYGVITVTFHPKDEQQQP-MQDTLLYIGSCD---NPNYLGPAPLETIAQQIVKSVGPSGKNTDYLFELADAL 153          
BLAST of CK939033 vs. ExPASy Swiss-Prot
Match: CHAC2_CHICK (Cation transport regulator-like protein 2 OS=Gallus gallus GN=chac2 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.335e-27
Identity = 72/158 (45.57%), Postives = 89/158 (56.33%), Query Frame = 3
Query:  231 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAM 704
            WVFGYGSL+W   F Y EK++G I+ Y R F     DHRG P  P R  TL +  E   WGVAY +  G E E  A  YL+ RE      T V FY +    +P    V+++  T D   N  YLGPAPL+E+A QI  AVGP G N +YLF+L  +M
Sbjct:    2 WVFGYGSLIWKVDFPYQEKMVGRIRGYSRRFWQGSTDHRGVPGKPGRVVTLVEDPEGCVWGVAYRLPAGQECEVKA--YLDFREKGGYRTTTVVFYPKDSSIKP--FDVLLYIGTRD---NPNYLGPAPLQEIAEQIIDAVGPSGRNTEYLFELANSM 152          
BLAST of CK939033 vs. ExPASy Swiss-Prot
Match: CHAC2_XENLA (Cation transport regulator-like protein 2 OS=Xenopus laevis GN=chac2 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.277e-27
Identity = 71/158 (44.94%), Postives = 90/158 (56.96%), Query Frame = 3
Query:  231 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAM 704
            WVFGYGSL+W   F Y EK++G+I  Y R F     DHRG P  P R  TL +  E   WGVAY +  G E+E  A  YL+ RE      + V FY +    QP    V+++  T D   N  YLGPAPLE++A QI  AVGP G N +YLF+L  ++
Sbjct:    2 WVFGYGSLIWKVDFPYVEKLVGYIMCYSRRFWQGSTDHRGVPGKPGRVVTLVEDPEGCVWGVAYRLPEGKEEEVKA--YLDFREKGGYRTSTVVFYPKDPSIQP--FNVLLYIGTCD---NPNYLGPAPLEDIAEQILNAVGPSGRNTEYLFELANSL 152          
BLAST of CK939033 vs. ExPASy Swiss-Prot
Match: CHAC2_HUMAN (Cation transport regulator-like protein 2 OS=Homo sapiens GN=CHAC2 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.476e-26
Identity = 68/158 (43.04%), Postives = 90/158 (56.96%), Query Frame = 3
Query:  231 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAM 704
            WVFGYGSL+W   F Y +K++G+I +Y R F     DHRG P  P R  TL +      WGVAY +  G E+E  A  YL+ RE      T V FY +   ++P    V+++  T D   N  YLGPAPLE++A QI  A GP G N +YLF+L  ++
Sbjct:    2 WVFGYGSLIWKVDFPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPAGCVWGVAYRLPVGKEEEVKA--YLDFREKGGYRTTTVIFYPKDPTTKP--FSVLLYIGTCD---NPDYLGPAPLEDIAEQIFNAAGPSGRNTEYLFELANSI 152          
BLAST of CK939033 vs. ExPASy Swiss-Prot
Match: CHAC2_RAT (Cation transport regulator-like protein 2 OS=Rattus norvegicus GN=Chac2 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.517e-26
Identity = 67/154 (43.51%), Postives = 87/154 (56.49%), Query Frame = 3
Query:  231 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKL 692
            WVFGYGSL+W   F Y +K++G+I +Y R F     DHRG P  P R  TL +      WGVAY +  G E+E     YL+ RE      T V FY +   ++P    V+++  T D   N  YLGPAPLE++A QI  A GP G N +YLF+L
Sbjct:    2 WVFGYGSLIWKVDFPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPGGSVWGVAYKLPVGKEEE--VKTYLDFREKGGYRTTTVIFYPKDSTTKP--FSVLLYIGTCD---NPNYLGPAPLEDIAEQIFNAAGPSGRNTEYLFEL 148          
BLAST of CK939033 vs. ExPASy Swiss-Prot
Match: CHAC2_MOUSE (Cation transport regulator-like protein 2 OS=Mus musculus GN=Chac2 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.517e-26
Identity = 67/154 (43.51%), Postives = 87/154 (56.49%), Query Frame = 3
Query:  231 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKL 692
            WVFGYGSL+W   F Y +K++G+I +Y R F     DHRG P  P R  TL +      WGVAY +  G E+E     YL+ RE      T V FY +   ++P    V+++  T D   N  YLGPAPLE++A QI  A GP G N +YLF+L
Sbjct:    2 WVFGYGSLIWKVDFPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPGGSVWGVAYKLPVGKEEE--VKTYLDFREKGGYRTTTVIFYPKDSTTKP--FSVLLYIGTCD---NPNYLGPAPLEDIAEQIFNAAGPSGRNTEYLFEL 148          
BLAST of CK939033 vs. ExPASy Swiss-Prot
Match: CHAC1_MOUSE (Cation transport regulator-like protein 1 OS=Mus musculus GN=Chac1 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.804e-24
Identity = 68/161 (42.24%), Postives = 88/161 (54.66%), Query Frame = 3
Query:  231 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERREC---EYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAM 704
            W+FGYGSLVW P F Y +  +GF++ Y R F      HRG+ + P R  TL +  E   WGVAY VRG  E+   A++YL  RE     YD+K  V FY +  P QP     + + +TP    N  YLGPAP E +A QI    G  G+N +YL +L   M
Sbjct:   35 WIFGYGSLVWKPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMPGRVVTLLEDHEGCTWGVAYQVRG--EQVNEALKYLNVREAVLGGYDTKE-VTFYPQDTPDQPLT--ALAYVATP---QNPGYLGPAPEEVIATQILACRGFSGHNLEYLLRLADFM 187          
BLAST of CK939033 vs. ExPASy Swiss-Prot
Match: CHAC1_HUMAN (Cation transport regulator-like protein 1 OS=Homo sapiens GN=CHAC1 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.248e-24
Identity = 67/161 (41.61%), Postives = 88/161 (54.66%), Query Frame = 3
Query:  231 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERREC---EYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAM 704
            W+FGYGSLVW P F Y +  +GF++ Y R F      HRG+ + P R  TL +  E   WGVAY V+G  E+   A++YL  RE     YD+K  V FY +  P QP     + + +TP    N  YLGPAP E +A QI    G  G+N +YL +L   M
Sbjct:   34 WIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMPGRVVTLLEDHEGCTWGVAYQVQG--EQVSKALKYLNVREAVLGGYDTKE-VTFYPQDAPDQP--LKALAYVATP---QNPGYLGPAPEEAIATQILACRGFSGHNLEYLLRLADFM 186          
BLAST of CK939033 vs. ExPASy Swiss-Prot
Match: CHAC1_DANRE (Cation transport regulator-like protein 1 OS=Danio rerio GN=chac1 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.994e-23
Identity = 65/164 (39.63%), Postives = 87/164 (53.05%), Query Frame = 3
Query:  219 KMVFWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDS--KTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAM 704
            K   W+FGYGSLVW P F+Y    +G+IK Y+R F      HRG  + P R  TL +  +   WGVA+ V G   +E  +++YL  RE          VDF+  G    P     +V+ +TPD   N  YLGPA  EE+A QIA   G  G+N +YL +L + M
Sbjct:   10 KSSLWIFGYGSLVWKPDFKYKRSKVGYIKGYKRRFWHGDNFHRGDDEMPGRVVTLIEEDDVCTWGVAFEVTGSQMEE--SLKYLNVREAVRGGYLTRAVDFFPRGTNQPP--VQALVYIATPD---NPIYLGPASTEEIASQIAVCKGNSGHNIEYLLRLAEFM 166          
BLAST of CK939033 vs. ExPASy Swiss-Prot
Match: CHAC2_BOVIN (Cation transport regulator-like protein 2 OS=Bos taurus GN=CHAC2 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.803e-23
Identity = 65/158 (41.14%), Postives = 85/158 (53.80%), Query Frame = 3
Query:  231 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAM 704
            WVFGYGSL+W   F Y +K++G+I  Y R F     DHRG P   +             WGVAY +  G E+E  A  YL+ RE      T V FY +   ++P    V+++  T D   N  YLGPAPLE++A QI  A GP G N +YLF+L  +M
Sbjct:    2 WVFGYGSLIWKVDFPYQDKLVGYISGYSRRFWQGSTDHRGVPGKGS------------VWGVAYKLPVGKEEEVKA--YLDFREKGGYRTTTVIFYPKDSTTEP--FSVLLYIGTRD---NPNYLGPAPLEDIAEQIFNAAGPSGKNTEYLFELANSM 140          
The following BLAST results are available for this feature:
BLAST of CK939033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
CHAC2_DANRE2.059e-2843.67Cation transport regulator-like protein 2 OS=Danio... [more]
CHAC2_CHICK1.335e-2745.57Cation transport regulator-like protein 2 OS=Gallu... [more]
CHAC2_XENLA2.277e-2744.94Cation transport regulator-like protein 2 OS=Xenop... [more]
CHAC2_HUMAN1.476e-2643.04Cation transport regulator-like protein 2 OS=Homo ... [more]
CHAC2_RAT2.517e-2643.51Cation transport regulator-like protein 2 OS=Rattu... [more]
CHAC2_MOUSE2.517e-2643.51Cation transport regulator-like protein 2 OS=Mus m... [more]
CHAC1_MOUSE1.804e-2442.24Cation transport regulator-like protein 1 OS=Mus m... [more]
CHAC1_HUMAN5.248e-2441.61Cation transport regulator-like protein 1 OS=Homo ... [more]
CHAC1_DANRE1.994e-2339.63Cation transport regulator-like protein 1 OS=Danio... [more]
CHAC2_BOVIN5.803e-2341.14Cation transport regulator-like protein 2 OS=Bos t... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004435_A11 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650003_IVF_A11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939033 ID=CK939033; Name=CK939033; organism=Citrus sinensis; type=EST; length=718bp
GGGGATATAAAAAGGCGTGTTTATATAACTCGCAACCTCCATCCCTCTCT
TTGCTCGTGTCTCAATTGCACCCACACGAGAGACGGGGAGAGAGAGAGAG
AGAGAGGAAGCGAAGAGAAATAGAAAGAGAGAATACAGAATCCTAACCTT
AGGCGTTTTAGCTTGTTTCGTTTCCCTCTTTTGCTTCAAGTTTCTTCCTT
TCTCTCGCGATTTCCTTGAAAATGGTGTTCTGGGTTTTTGGGTATGGATC
ATTGGTGTGGAACCCAGGGTTTGAATATGATGAGAAAATTTTAGGCTTCA
TCAAGGACTACAGGCGCGTGTTTGATCTTGCATGCATTGATCACAGGGGT
ACACCTCAACACCCGGCTAGAACTTGCACGCTGGAAAAATCTCAAGAAAC
CATTTGTTGGGGTGTTGCTTATTGTGTCCGAGGAGGTCCCGAAAAGGAAA
GACTCGCTATGGAGTATTTGGAACGAAGAGAATGCGAGTACGACTCTAAG
ACCCTTGTAGACTTTTACAGGGAAGGGGAGCCTTCACAGCCGGCTCTAAC
TGGGGTTATAGTTTTCACGTCTACTCCAGACAAAGTATCAAACAAGTATT
ATCTGGGGCCTGCTCCATTGGAGGAAATGGCTAGGCAAATTGCAACGGCT
GTCGGACCCTGTGGAAACAATAGAGACTACCTTTTCAAGTTGGAGAAGGC
CATGTTTGATATTGGTCA
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