CX675594
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675594 vs. ExPASy Swiss-Prot
Match: TMEDA_DICDI (Transmembrane emp24 domain-containing protein A OS=Dictyostelium discoideum GN=empA PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.815e-17 Identity = 49/139 (35.25%), Postives = 78/139 (56.12%), Query Frame = 1 Query: 13 IDFTVTSPAGNVVHTVKGTSGDKFEFKAPRSGMYKFCFNNPYS--TPETVSFYIHVGHIPNEHNLAKDEHLDPINVKIAELREALESVVSEQKYLRARDTRHRHTNESTRKRLLGYTIGEYVLLAMASALQVLYIRKLF 423 IDFT+ SP +V++ + S ++ +G+Y FCF+N S T +TVSF + VG +AK + L PI I L + + +V +EQ Y + R+ HR+T EST R+L +++ E +L S Q+ Y+R+ F Sbjct: 61 IDFTIISPDKRIVYSGQRESEGTKTLRSSFAGVYSFCFSNKMSSLTDKTVSFILSVGESSPIREIAKKKDLTPIERSIMTLSDGVIAVKNEQNYFKMREAAHRNTAESTNSRVLWWSVFEAFVLIALSIWQIYYLRRFF 199
BLAST of CX675594 vs. ExPASy Swiss-Prot
Match: TMED2_RAT (Transmembrane emp24 domain-containing protein 2 OS=Rattus norvegicus GN=Tmed2 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.441e-15 Identity = 43/139 (30.94%), Postives = 73/139 (52.52%), Query Frame = 1 Query: 13 IDFTVTSPAGNVVHTVKGTSGDKFEFKAPRSGMYKFCFNNPYS--TPETVSFYIHVGHIPNEHNLAKDEHLDPINVKIAELREALESVVSEQKYLRARDTRHRHTNESTRKRLLGYTIGEYVLLAMASALQVLYIRKLF 423 ID +T P ++ S K+ F A G YKFCF+N S TP+ V F I +G P ++ + H + + I EL A+ +V EQ+Y+ R+ HR N++T R++ ++ E ++L + Q+ Y+++ F Sbjct: 57 IDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIYYLKRFF 195
BLAST of CX675594 vs. ExPASy Swiss-Prot
Match: TMED2_MOUSE (Transmembrane emp24 domain-containing protein 2 OS=Mus musculus GN=Tmed2 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.441e-15 Identity = 43/139 (30.94%), Postives = 73/139 (52.52%), Query Frame = 1 Query: 13 IDFTVTSPAGNVVHTVKGTSGDKFEFKAPRSGMYKFCFNNPYS--TPETVSFYIHVGHIPNEHNLAKDEHLDPINVKIAELREALESVVSEQKYLRARDTRHRHTNESTRKRLLGYTIGEYVLLAMASALQVLYIRKLF 423 ID +T P ++ S K+ F A G YKFCF+N S TP+ V F I +G P ++ + H + + I EL A+ +V EQ+Y+ R+ HR N++T R++ ++ E ++L + Q+ Y+++ F Sbjct: 57 IDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIYYLKRFF 195
BLAST of CX675594 vs. ExPASy Swiss-Prot
Match: TMED2_HUMAN (Transmembrane emp24 domain-containing protein 2 OS=Homo sapiens GN=TMED2 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.441e-15 Identity = 43/139 (30.94%), Postives = 73/139 (52.52%), Query Frame = 1 Query: 13 IDFTVTSPAGNVVHTVKGTSGDKFEFKAPRSGMYKFCFNNPYS--TPETVSFYIHVGHIPNEHNLAKDEHLDPINVKIAELREALESVVSEQKYLRARDTRHRHTNESTRKRLLGYTIGEYVLLAMASALQVLYIRKLF 423 ID +T P ++ S K+ F A G YKFCF+N S TP+ V F I +G P ++ + H + + I EL A+ +V EQ+Y+ R+ HR N++T R++ ++ E ++L + Q+ Y+++ F Sbjct: 57 IDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIYYLKRFF 195
BLAST of CX675594 vs. ExPASy Swiss-Prot
Match: TMED2_CRIGR (Transmembrane emp24 domain-containing protein 2 (Fragment) OS=Cricetulus griseus GN=TMED2 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.441e-15 Identity = 43/139 (30.94%), Postives = 73/139 (52.52%), Query Frame = 1 Query: 13 IDFTVTSPAGNVVHTVKGTSGDKFEFKAPRSGMYKFCFNNPYS--TPETVSFYIHVGHIPNEHNLAKDEHLDPINVKIAELREALESVVSEQKYLRARDTRHRHTNESTRKRLLGYTIGEYVLLAMASALQVLYIRKLF 423 ID +T P ++ S K+ F A G YKFCF+N S TP+ V F I +G P ++ + H + + I EL A+ +V EQ+Y+ R+ HR N++T R++ ++ E ++L + Q+ Y+++ F Sbjct: 52 IDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIYYLKRFF 190
BLAST of CX675594 vs. ExPASy Swiss-Prot
Match: TMED_NEMVE (Transmembrane emp24 domain-containing protein OS=Nematostella vectensis GN=v1g194562 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.968e-14 Identity = 38/139 (27.34%), Postives = 75/139 (53.96%), Query Frame = 1 Query: 13 IDFTVTSPAGNVVHTVKGTSGDKFEFKAPRSGMYKFCFNNPYST--PETVSFYIHVGHIPNEHNLAKDEHLDPINVKIAELREALESVVSEQKYLRARDTRHRHTNESTRKRLLGYTIGEYVLLAMASALQVLYIRKLF 423 ID + P V+++ + + K+ F A G Y +CF+N ST P+ + F + +G P + + + D ++ +++L EA+ V EQ+Y+ R+ HR N++T R++ ++ E ++L + QV Y+++ F Sbjct: 59 IDVKIIGPDQKVIYSGERETSGKYTFAAHMDGTYNYCFSNKMSTMTPKVLKFSMDIGEAPKDTSKEDNAGHDKLSEMVSQLSEAMTGVKHEQEYMEVRERIHRSINDNTNSRVVWWSFFESLVLVAMTLGQVYYLKRFF 197
BLAST of CX675594 vs. ExPASy Swiss-Prot
Match: TMEDB_DICDI (Transmembrane emp24 domain-containing protein B OS=Dictyostelium discoideum GN=empB PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 8.474e-14 Identity = 49/143 (34.27%), Postives = 75/143 (52.45%), Query Frame = 1 Query: 13 IDFTVTSPAGNVV----HTVKGTSGDKFEFKAPRSGMYKFCFNNPYS--TPETVSFYIHVGHIPNEHNLAKDEHLDPINVKIAELREALESVVSEQKYLRARDTRHRHTNESTRKRLLGYTIGEYVLLAMASALQVLYIRKLF 423 I+ +T P GN + H G K F A SG YK CFNN S T + V+F +AK + + P++ + ++ L+SV+ EQK LR R+ +R T+EST R++ +TI E ++L + Q+ Y+RK F Sbjct: 61 INVKLTDPKGNTIFERLHFDTQMKG-KQSFTAGESGAYKVCFNNEMSRFTAKVVTF-TWASEEEGVKEVAKGDSITPMDQSVQKIERVLQSVIHEQKKLRYREQANRDTSESTNARVVWWTIAEVIVLVVMGVGQIWYLRKWF 201
BLAST of CX675594 vs. ExPASy Swiss-Prot
Match: TMED3_MOUSE (Transmembrane emp24 domain-containing protein 3 OS=Mus musculus GN=Tmed3 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 9.370e-13 Identity = 46/154 (29.87%), Postives = 76/154 (49.35%), Query Frame = 1 Query: 4 HPGIDFTVTSPAGNVVHTVKGTSGDKFEFKAPRSGMYKFCFNNPYST--PETVSFYIHVGH----IPNEHNLAKDEHLDPINVKIAELREALESVVSEQKYLRARDTRHRHTNESTRKRLLGYTIGEYVLLAMASALQVLYIRKLFSKSVAYNR 447 H +D V P GNV++ D F +K G+Y+FCF+N +ST +TV F VG +P+ N + L + + EAL++V+ Q + R R+ + R E R+ +++GE + L + S QVL ++ F++ NR Sbjct: 66 HYDVDCYVEDPRGNVIYRETKKQYDSFTYKTEAKGVYRFCFSNEFSTFSHKTVYFDFQVGDEPPILPDMGN--RVTALTQMESACVTIHEALKTVIDSQTHYRLREAQDRARAEDLNSRVSYWSVGETIALFVVSFSQVLLLKSFFTEKRPVNR 217
BLAST of CX675594 vs. ExPASy Swiss-Prot
Match: TMED7_HUMAN (Transmembrane emp24 domain-containing protein 7 OS=Homo sapiens GN=TMED7 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.224e-12 Identity = 46/147 (31.29%), Postives = 75/147 (51.02%), Query Frame = 1 Query: 4 HPGIDFTVTSPAGNVVHTVKGTSGDKFEFKAPRSGMYKFCFNNPYS--TPETVSFYIHVGH----IPNEHNLAKDEHLDPINVKIAELREALESVVSEQKYLRARDTRHRHTNESTRKRLLGYTIGEYVLLAMASALQVLYIRKLFS 426 H +D + P G V++ D F F A ++G YKFCF+N +S T +TV F VG P+E+ ++ ++ V I EAL+SV+ Q + R R+ + R E R+ +++GE ++L + S QV ++ FS Sbjct: 70 HYDVDCRLEDPDGKVLYKEMKKQYDSFTFTASKNGTYKFCFSNEFSTFTHKTVYFDFQVGEDPPLFPSENRVSALTQMESACVSI---HEALKSVIDYQTHFRLREAQGRSRAEDLNTRVAYWSVGEALILLVVSIGQVFLLKSFFS 213
BLAST of CX675594 vs. ExPASy Swiss-Prot
Match: TMED3_RAT (Transmembrane emp24 domain-containing protein 3 OS=Rattus norvegicus GN=Tmed3 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.087e-12 Identity = 45/154 (29.22%), Postives = 76/154 (49.35%), Query Frame = 1 Query: 4 HPGIDFTVTSPAGNVVHTVKGTSGDKFEFKAPRSGMYKFCFNNPYST--PETVSFYIHVGH----IPNEHNLAKDEHLDPINVKIAELREALESVVSEQKYLRARDTRHRHTNESTRKRLLGYTIGEYVLLAMASALQVLYIRKLFSKSVAYNR 447 H +D V P GN+++ D F +K G+Y+FCF+N +ST +TV F VG +P+ N + L + + EAL++V+ Q + R R+ + R E R+ +++GE + L + S QVL ++ F++ NR Sbjct: 66 HYDVDCYVEDPMGNIIYRETKKQYDSFTYKTEVKGVYRFCFSNEFSTFSHKTVYFDFQVGDEPPILPDMGN--RVTALTQMESACVTIHEALKTVIDSQTHYRLREAQDRARAEDLNSRVSYWSVGETIALFVVSFSQVLLLKSFFTEKRPINR 217 The following BLAST results are available for this feature:
BLAST of CX675594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675594 ID=CX675594; Name=CX675594; organism=Citrus sinensis; type=EST; length=623bpback to top |