CX675593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675593 vs. ExPASy Swiss-Prot
Match: RL7A_ORYSJ (60S ribosomal protein L7a OS=Oryza sativa subsp. japonica GN=RPL7A PE=2 SV=1) HSP 1 Score: 303.908 bits (777), Expect = 6.292e-82 Identity = 151/178 (84.83%), Postives = 164/178 (92.13%), Query Frame = -1 Query: 238 DKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKSQXXXXXXXXXXXXXXAQRLT 771 DKNLA++LFK+LLKYRPED+AAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQ+KAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK+RLGSIVHKKTASVLCLTTVKNEDK+EFSKILEAIKANFNDK++E+RKKWGGG+MGSKSQ AQR+T Sbjct: 81 DKNLATNLFKMLLKYRPEDKAAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKARLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAKTKAREKLLAKEAAQRMT 258
BLAST of CX675593 vs. ExPASy Swiss-Prot
Match: RL7A1_ARATH (60S ribosomal protein L7a-1 OS=Arabidopsis thaliana GN=RPL7AA PE=2 SV=2) HSP 1 Score: 296.204 bits (757), Expect = 1.312e-79 Identity = 144/159 (90.57%), Postives = 155/159 (97.48%), Query Frame = -1 Query: 295 DKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKSQ 771 DKNLA+SLFK+LLKYRPED+AAKKERL+K+AQAEAEGK E+KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGKSRLG++VH+KTAS LCLTTVKNEDK+EFSKILEAIKANFNDKYEE RKKWGGGIMGSKSQ Sbjct: 80 DKNLATSLFKVLLKYRPEDKAAKKERLVKKAQAEAEGKPSESKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGAVVHQKTASCLCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQ 238
BLAST of CX675593 vs. ExPASy Swiss-Prot
Match: RL7A2_ARATH (60S ribosomal protein L7a-2 OS=Arabidopsis thaliana GN=RPL7AB PE=2 SV=1) HSP 1 Score: 295.819 bits (756), Expect = 1.713e-79 Identity = 143/159 (89.94%), Postives = 154/159 (96.86%), Query Frame = -1 Query: 295 DKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKSQ 771 DKNLA+SLFK+LLKYRPED+AAKKERLL +AQAEAEGK E+KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGKSRLG++VH+KTA+ LCLTTVKNEDK+EFSKILEAIKANFNDKYEE RKKWGGGIMGSKSQ Sbjct: 79 DKNLATSLFKILLKYRPEDKAAKKERLLNKAQAEAEGKPAESKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGAVVHQKTAAALCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQ 237
BLAST of CX675593 vs. ExPASy Swiss-Prot
Match: RL7A_DROME (60S ribosomal protein L7a OS=Drosophila melanogaster GN=RpL7A PE=2 SV=2) HSP 1 Score: 206.838 bits (525), Expect = 1.047e-52 Identity = 105/159 (66.04%), Postives = 124/159 (77.99%), Query Frame = -1 Query: 298 DKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGKTVEAKK-PIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 771 DK A LFKLL KYRPE AKK RL K A+A+A+GK VE KK P V G N VT LIEQ KAQLVVIAHDVDP+ELV++LPALCRKM +PYCIVKGK+RLG +V +KT + L LTTV N DK F K+LEA+K NFN+++EE+R+ WGGGI+GSKS Sbjct: 93 DKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNERHEEIRRHWGGGILGSKS 251
BLAST of CX675593 vs. ExPASy Swiss-Prot
Match: RL8_SCHPO (60S ribosomal protein L8 OS=Schizosaccharomyces pombe GN=rpl8 PE=1 SV=3) HSP 1 Score: 201.06 bits (510), Expect = 5.744e-51 Identity = 99/161 (61.49%), Postives = 127/161 (78.88%), Query Frame = -1 Query: 295 DKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGKTVE--AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKSQ 771 DKN A+ +FKLL KYRPE A KK+RL+ A+A A GK+ + +KKP VKYGLNHV LIE KA+LV+IA DVDPIELVV+LPALC+KM +PY IVK K+RLG+++H+KTA+VL +T V+ EDK E + I+ A+ ANF+ KY+E R+KWGGGIMG K+Q Sbjct: 83 DKNTATQVFKLLNKYRPETAAEKKQRLVAEAEAVANGKSAQDVSKKPYNVKYGLNHVVALIEAKKAKLVLIASDVDPIELVVFLPALCKKMGVPYAIVKNKARLGTVIHQKTAAVLAVTEVREEDKNELASIVSAVDANFSAKYDESRRKWGGGIMGGKTQ 243
BLAST of CX675593 vs. ExPASy Swiss-Prot
Match: RL7A_ICTPU (60S ribosomal protein L7a OS=Ictalurus punctatus GN=rpl7a PE=2 SV=3) HSP 1 Score: 197.208 bits (500), Expect = 8.294e-50 Identity = 96/159 (60.38%), Postives = 121/159 (76.10%), Query Frame = -1 Query: 298 DKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGK-TVEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 771 D+ A+ LFKL KYRPE + KK RLL RA+ +A GK V K+P VV+ G+N VT L+E KAQLVVIAHDVDPIELV++LPALCRKM +PYCIVKGK+RLG +VH+KT + +C T ED+ +K++EAIK N+ND+YEE+R+ WGG IMG KS Sbjct: 88 DRQTATQLFKLAHKYRPETKQEKKRRLLARAEQKAAGKGDVPTKRPPVVRAGVNTVTSLVESKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKARLGRLVHRKTCTSVCFTQTNPEDRAALAKLVEAIKTNYNDRYEEIRRHWGGNIMGPKS 246
BLAST of CX675593 vs. ExPASy Swiss-Prot
Match: RL8A_YEAST (60S ribosomal protein L8-A OS=Saccharomyces cerevisiae GN=RPL8A PE=1 SV=4) HSP 1 Score: 193.741 bits (491), Expect = 9.170e-49 Identity = 96/161 (59.63%), Postives = 125/161 (77.64%), Query Frame = -1 Query: 295 DKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGKTVE--AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKSQ 771 D+N A+ FKL KYRPE A KKERL K A A AEGK+ + + KP VKYGLNHV LIE KA+LV+IA+DVDPIELVV+LPALC+KM +PY IVKGK+RLG++V++KT++V LT V+ ED+ +K++ I ANF DKY+E++K WGGGI+G+K+Q Sbjct: 83 DRNTAAETFKLFNKYRPETAAEKKERLTKEAAAVAEGKSKQDASPKPYAVKYGLNHVVALIENKKAKLVLIANDVDPIELVVFLPALCKKMGVPYAIVKGKARLGTLVNQKTSAVAALTEVRAEDEAALAKLVSTIDANFADKYDEVKKHWGGGILGNKAQ 243
BLAST of CX675593 vs. ExPASy Swiss-Prot
Match: RL7A_TAKRU (60S ribosomal protein L7a OS=Takifugu rubripes GN=rpl7a PE=3 SV=3) HSP 1 Score: 193.356 bits (490), Expect = 1.198e-48 Identity = 93/159 (58.49%), Postives = 121/159 (76.10%), Query Frame = -1 Query: 298 DKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGK-TVEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 771 D+ A+ LFKL KYRPE + KK+RLL RA+ +A GK K+P V++ G+N +T L+E KAQLVVIAHDVDPIELV++LPALCRKM +PYCIVKGK+RLG +VH+KT + + T EDK +K++EAIK N+ND+YEE+R+ WGGGI+G KS Sbjct: 88 DRQTATQLFKLAHKYRPETKQEKKKRLLARAEQKAAGKGDAPTKRPPVLRAGVNTITSLVENKKAQLVVIAHDVDPIELVIFLPALCRKMGVPYCIVKGKARLGRLVHRKTCTSVAFTQTNPEDKGALAKLVEAIKTNYNDRYEEIRRHWGGGILGPKS 246
BLAST of CX675593 vs. ExPASy Swiss-Prot
Match: RL8B_YEAST (60S ribosomal protein L8-B OS=Saccharomyces cerevisiae GN=RPL8B PE=1 SV=3) HSP 1 Score: 192.971 bits (489), Expect = 1.564e-48 Identity = 95/161 (59.01%), Postives = 125/161 (77.64%), Query Frame = -1 Query: 295 DKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGKTVE--AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKSQ 771 D+N A+ FKL KYRPE A KKERL K A A AEGK+ + + KP VKYGLNHV LIE KA+LV+IA+DVDPIELVV+LPALC+KM +PY I+KGK+RLG++V++KT++V LT V+ ED+ +K++ I ANF DKY+E++K WGGGI+G+K+Q Sbjct: 83 DRNTAAETFKLFNKYRPETAAEKKERLTKEAAAIAEGKSKQDASPKPYAVKYGLNHVVSLIENKKAKLVLIANDVDPIELVVFLPALCKKMGVPYAIIKGKARLGTLVNQKTSAVAALTEVRAEDEAALAKLVSTIDANFADKYDEVKKHWGGGILGNKAQ 243
BLAST of CX675593 vs. ExPASy Swiss-Prot
Match: RL7A_BOVIN (60S ribosomal protein L7a OS=Bos taurus GN=RPL7A PE=2 SV=3) HSP 1 Score: 192.586 bits (488), Expect = 2.043e-48 Identity = 91/159 (57.23%), Postives = 122/159 (76.73%), Query Frame = -1 Query: 298 DKNLASSLFKLLLKYRPEDRAAKKERLLKRAQAEAEGK-TVEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 771 D+ A+ L KL KYRPE + KK+RLL RA+ +A GK V K+P V++ G+N VT L+E KAQLVVIAHDVDPIELVV+LPALCRKM +PYCI+KGK+RLG +VH+KT + + T V +EDK +K++EAI+ N+ND+Y+E+R+ WGG ++G KS Sbjct: 88 DRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTTVAFTQVNSEDKSALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKS 246 The following BLAST results are available for this feature:
BLAST of CX675593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675593 ID=CX675593; Name=CX675593; organism=Citrus sinensis; type=EST; length=771bpback to top |