CK939014

Overview
NameCK939014
Unique NameCK939014
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK939014 vs. ExPASy Swiss-Prot
Match: 12KD_FRAAN (Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.989e-18
Identity = 40/51 (78.43%), Postives = 46/51 (90.20%), Query Frame = 2 
Query:   89 RKDNVWRSVFHPGSNLATRGIGAEVFDKPTHPNSPTVYDWLYSGETRSKHH 241
            RKDNVWRSVFHPGSNL+++ +G +VFD P  PNSPTVYDW+YSGETRSKHH
Sbjct:   61 RKDNVWRSVFHPGSNLSSKTMGNQVFDSP-QPNSPTVYDWMYSGETRSKHH 110
The following BLAST results are available for this feature:
BLAST of CK939014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
12KD_FRAAN2.989e-1878.43Auxin-repressed 12.5 kDa protein OS=Fragaria anana... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004435_D04 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650003_IVF_D04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939014 ID=CK939014; Name=CK939014; organism=Citrus sinensis; type=EST; length=677bp
GGGGGGCAAGTTCCAGAGGTCTCTGTCAATGCCAGCGAGTCCAGGGGCAC
CGTCGACGCCAGTGACGCCGACGACGCCGCTGTCGGCGCGTAAGGACAAC
GTGTGGAGGAGCGTGTTTCACCCCGGTAGCAACCTTGCTACTAGGGGTAT
CGGTGCAGAGGTCTTTGACAAGCCCACACATCCTAACTCTCCCACTGTTT
ATGACTGGCTTTACAGTGGGGAGACTAGGAGCAAGCATCATCACTAGTGG
ATGATACGCTACAGCGATGTAAATGAATGTGATGGGTCACCAACTCACCG
GATGAGTTGCCTGTAGTCTGTAGATAGTGTCGTTTCGTTTTGGATTTCGC
AACGTGTCCTTGTCGTTTTGTTAATGCTATTTGTATTACGTGTCCTTCCT
ATCTAAAGTTTGGTTTTAAAATGCTGCTGACTAAAAGTAAATTAAAGACT
GTGATGTTTTTATATCATATAATTTAATAATTGTATGTGATGTGAGGATT
GCTAAGCTGTGGGCGGAGATGAAAGGTTGCTGGTTTTTGGGTTTAGGACA
TGTTTTTGATTGTCATTTTGTAAGAGCCAAGATCATCCCTTCGTGGACGG
TCGTGATGAGCATATATGTTTTATTATTAATAAATAAGTTGCTTCTCTCA
AAAAAAAAAAAAAAAAAAAAAAAAAAA
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