CK938995

Overview
NameCK938995
Unique NameCK938995
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length694
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938995 vs. ExPASy Swiss-Prot
Match: TCTP_HEVBR (Translationally-controlled tumor protein homolog OS=Hevea brasiliensis GN=TCTP PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 8.084e-75
Identity = 142/168 (84.52%), Postives = 144/168 (85.71%), Query Frame = 3
Query:  108 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVXC 611
            MLVYQDLLTGDELLSDSFPYKEI NGILWEVEGKWVVQGAVDVDIGANPS               KVVDIVDTFRLQEQPAFDKK FVTYMKRFIKLLTPKL EE+QE FKKNIEGATKFLLSKLSDLQFFVGESMHDDG LVFAYY+ GATDPTFLY A ALKEV C
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKEIHNGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLDEEKQESFKKNIEGATKFLLSKLSDLQFFVGESMHDDGSLVFAYYRGGATDPTFLYFAYALKEVKC 168          
BLAST of CK938995 vs. ExPASy Swiss-Prot
Match: TCTP_ELAGV (Translationally-controlled tumor protein homolog OS=Elaeis guineensis var. tenera GN=TCTP PE=2 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 9.882e-73
Identity = 134/168 (79.76%), Postives = 144/168 (85.71%), Query Frame = 3
Query:  108 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVXC 611
            MLVYQDLLTGDELLSDSFPYKEI NG+LWEVEGKWV+QGAV+VDIGANPS               KVVDIVDTFRLQEQPAFDKK FVT+MKR+IK LTPKL  E+QE+FKK+IEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYK+GATDPTFLY A  LKE+ C
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKEIHNGMLWEVEGKWVIQGAVNVDIGANPSAEGGEEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLDAEKQELFKKHIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKDGATDPTFLYFAYGLKEIKC 168          
BLAST of CK938995 vs. ExPASy Swiss-Prot
Match: TCTP_CUCMA (Translationally-controlled tumor protein homolog OS=Cucurbita maxima GN=TCTP PE=2 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 9.249e-71
Identity = 129/168 (76.79%), Postives = 140/168 (83.33%), Query Frame = 3
Query:  108 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVXC 611
            MLVYQDLLTGDELLSDSFPYKE+ENG++WEVEGKWVVQGAVDVDIGANPS               KVVDIVDTFRLQEQP  DKK F+ Y+K+FIKLLTPKL  E+QE FKKNIEGATKFLL KL D +FFVGESMHDD C+VFAYY+EGATDPTFLY+A ALKEV C
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLKDFRFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168          
BLAST of CK938995 vs. ExPASy Swiss-Prot
Match: TCTP_SOYBN (Translationally-controlled tumor protein homolog OS=Glycine max GN=TCTP PE=2 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 2.278e-69
Identity = 131/168 (77.98%), Postives = 140/168 (83.33%), Query Frame = 3
Query:  108 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVXC 611
            MLVYQDLLTGDELLSDSF YKEIENG+LWEVEGKWVV+GAVDVDIGANPS               KVVDIVDTFRLQEQPAFDKK FVT+MKRFIK LTPKL  E+QE+FKK+IEGATK+LLSK+ D QFFVGESM DD CLVFAYYK+GA DPTFLY A ALKEV C
Sbjct:    1 MLVYQDLLTGDELLSDSFRYKEIENGMLWEVEGKWVVKGAVDVDIGANPSAEGGGEDEGVDDAAVKVVDIVDTFRLQEQPAFDKKQFVTFMKRFIKNLTPKLDAEQQELFKKHIEGATKYLLSKIKDFQFFVGESMGDDACLVFAYYKDGAADPTFLYFAYALKEVKC 168          
BLAST of CK938995 vs. ExPASy Swiss-Prot
Match: TCTP_ORYSJ (Translationally-controlled tumor protein homolog OS=Oryza sativa subsp. japonica GN=TCTP PE=1 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 6.628e-69
Identity = 129/168 (76.79%), Postives = 139/168 (82.74%), Query Frame = 3
Query:  108 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVXC 611
            MLVYQDLLTGDELLSDSFPY+EIENGILWEV+GKWVVQGA+DVDIGANPS               KVVDIVDTFRLQEQP FDKK FVT+MKR+IK L+ KL  E+QE FKKNIEGATK+LL KL DLQFFVGESMHDDG LVFAYYK+GATDPTFLY +  LKEV C
Sbjct:    1 MLVYQDLLTGDELLSDSFPYREIENGILWEVDGKWVVQGAIDVDIGANPSAEGGGDDEGVDDQAVKVVDIVDTFRLQEQPPFDKKQFVTFMKRYIKNLSAKLDAEKQEEFKKNIEGATKYLLGKLKDLQFFVGESMHDDGGLVFAYYKDGATDPTFLYFSHGLKEVKC 168          
BLAST of CK938995 vs. ExPASy Swiss-Prot
Match: TCTP_SOLLC (Translationally-controlled tumor protein homolog OS=Solanum lycopersicum GN=TCTP PE=2 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 8.657e-69
Identity = 127/168 (75.60%), Postives = 138/168 (82.14%), Query Frame = 3
Query:  108 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVXC 611
            MLVYQDLLTGDELLSDSFPYKE+ENG+LWEV+GKWVVQGAVDV+IGANPS               +VVDIVDTFRLQEQPAFDKK FVT+MKR+IK LTPKL  E QE FKKNIE ATKFLL K+ DLQFFVGESMHDDG LVFAYYKEG+ DP FLY+A  LKE+ C
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKEVENGVLWEVQGKWVVQGAVDVNIGANPSAEGGCEDEGVDDQAVRVVDIVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLEGETQEAFKKNIEAATKFLLQKIKDLQFFVGESMHDDGALVFAYYKEGSADPPFLYIAPGLKEIKC 168          
BLAST of CK938995 vs. ExPASy Swiss-Prot
Match: TCTP_SOLTU (Translationally-controlled tumor protein homolog OS=Solanum tuberosum GN=TCTP PE=2 SV=2)

HSP 1 Score: 258.07 bits (658), Expect = 3.290e-68
Identity = 127/168 (75.60%), Postives = 137/168 (81.55%), Query Frame = 3
Query:  108 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVXC 611
            MLVYQDLLTGDELLSDSFPYKEI+NG+LWEV+GKWVVQGAVDV+IGANPS               KVVDIVDTFRLQEQPAFDKK FVTY+KR+IK LTPKL  E QE FKKNIE ATKFLLSKL D QFFVGE MHDD  LVFAYYK+G+ DPTFLY+A  LKE+ C
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKEIQNGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYIKRYIKNLTPKLEGEAQEAFKKNIESATKFLLSKLKDFQFFVGEGMHDDSALVFAYYKDGSADPTFLYLAPGLKEIKC 168          
BLAST of CK938995 vs. ExPASy Swiss-Prot
Match: TCTP_ARATH (Translationally-controlled tumor protein homolog OS=Arabidopsis thaliana GN=TCTP PE=1 SV=2)

HSP 1 Score: 255.373 bits (651), Expect = 2.132e-67
Identity = 126/168 (75.00%), Postives = 136/168 (80.95%), Query Frame = 3
Query:  108 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVXC 611
            MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWV  GAVDV+IGANPS               KVVDIVDTFRLQEQP +DKK F+ Y+K++IKLLTPKLSEE Q +FKK IEGATKFLL +LSD QFFVGE MHDD  LVFAYYKEG+T+PTFLY A  LKEV C
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVTVGAVDVNIGANPSAEEGGEDEGVDDSTQKVVDIVDTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLSEEDQAVFKKGIEGATKFLLPRLSDFQFFVGEGMHDDSTLVFAYYKEGSTNPTFLYFAHGLKEVKC 168          
BLAST of CK938995 vs. ExPASy Swiss-Prot
Match: TCTP_FRAAN (Translationally-controlled tumor protein homolog OS=Fragaria ananassa GN=TCTP PE=2 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.058e-66
Identity = 130/170 (76.47%), Postives = 139/170 (81.76%), Query Frame = 3
Query:  108 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXX--KVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVXC 611
            MLVYQDLL+GDELLSDSFPYKEI+NG+LWEV+GKWVVQGAVDVDIGANPS                 KVVDIVDTFRLQEQP FDKK FVT++KR+IKLLTPKL  E+QE FKKNIEGATKFLLSKLSDLQFFVGESM DD  LVFA YKEGATDP F+Y A  LKEV C
Sbjct:    1 MLVYQDLLSGDELLSDSFPYKEIQNGVLWEVDGKWVVQGAVDVDIGANPSAEGADADADEGVDDQTVKVVDIVDTFRLQEQPPFDKKQFVTWVKRYIKLLTPKLEGEQQETFKKNIEGATKFLLSKLSDLQFFVGESMGDDTSLVFASYKEGATDPIFIYFAHGLKEVKC 170          
BLAST of CK938995 vs. ExPASy Swiss-Prot
Match: TCTP_PSEMZ (Translationally-controlled tumor protein homolog OS=Pseudotsuga menziesii GN=TCTP PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 2.358e-66
Identity = 126/168 (75.00%), Postives = 138/168 (82.14%), Query Frame = 3
Query:  108 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVXC 611
            M+VYQDLL+GDELLSDSFPYKE+ NG+LWEVEGKWVVQGAVDVDIGANPS               KVVDIVDTFRLQEQP FDKK F+ ++KR+IK L  KLSEERQ  FKKN+EGA K L+SKLSDLQFFVGESMHDDG +VFAYYK+GATDPTFLY AD LKEV C
Sbjct:    1 MIVYQDLLSGDELLSDSFPYKELYNGVLWEVEGKWVVQGAVDVDIGANPSAEGGDEEGVKIRLV-KVVDIVDTFRLQEQPPFDKKQFLGFIKRYIKNLATKLSEERQAEFKKNVEGAAKMLVSKLSDLQFFVGESMHDDGSMVFAYYKDGATDPTFLYFADGLKEVKC 167          
The following BLAST results are available for this feature:
BLAST of CK938995 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
TCTP_HEVBR8.084e-7584.52Translationally-controlled tumor protein homolog O... [more]
TCTP_ELAGV9.882e-7379.76Translationally-controlled tumor protein homolog O... [more]
TCTP_CUCMA9.249e-7176.79Translationally-controlled tumor protein homolog O... [more]
TCTP_SOYBN2.278e-6977.98Translationally-controlled tumor protein homolog O... [more]
TCTP_ORYSJ6.628e-6976.79Translationally-controlled tumor protein homolog O... [more]
TCTP_SOLLC8.657e-6975.60Translationally-controlled tumor protein homolog O... [more]
TCTP_SOLTU3.290e-6875.60Translationally-controlled tumor protein homolog O... [more]
TCTP_ARATH2.132e-6775.00Translationally-controlled tumor protein homolog O... [more]
TCTP_FRAAN1.058e-6676.47Translationally-controlled tumor protein homolog O... [more]
TCTP_PSEMZ2.358e-6675.00Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004435_F03 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650003_IVF_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938995 ID=CK938995; Name=CK938995; organism=Citrus sinensis; type=EST; length=694bp
GGGGCTCGCTCTCGCTCTCTCACCGCTGCGTCTCTCTCTCTCTCTCTCTC
TCCAGTTTTCTCCGTTGATTATTTTTCTTTTTTGTGTTCGCGAGAGAGAC
TGCAATCATGTTGGTCTATCAAGATCTCCTCACCGGTGATGAGCTTCTCT
CCGATTCTTTTCCCTACAAGGAAATTGAGAATGGGATTCTGTGGGAAGTT
GAGGGAAAGTGGGTTGTACAAGGAGCCGTTGATGTTGACATTGGTGCAAA
TCCTTCTGCCGAAGGAGCTGATGAGGATGAGGGTGTTGATGACCAAGCCG
TGAAGGTGGTTGACATTGTCGACACATTCAGGCTACAGGAGCAACCCGCT
TTTGACAAGAAGCCGTTTGTAACATACATGAAGAGATTCATCAAGTTGCT
GACGCCCAAGCTGAGTGAGGAGAGGCAGGAGATATTTAAGAAGAATATTG
AGGGAGCGACCAAGTTCTTGCTCTCGAAGCTCAGTGACCTTCAATTCTTT
GTTGGGGAGAGCATGCATGATGATGGCTGTCTTGTCTTTGCTTACTACAA
GGAAGGTGCGACCGACCCAACATTTTTGTATATGGCTGATGCATTGAAGG
AGGTGNNGTGCTAAGCTGGGCTTCGAAGAGGAAGTGCCTGCTGTAGTTCT
AATTTTAATTATTGCCCGCGGTTATTTTTATGTATCTTTTGTGC
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