CK938993
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938993 vs. ExPASy Swiss-Prot
Match: SKP1B_ARATH (SKP1-like protein 1B OS=Arabidopsis thaliana GN=SKP1B PE=1 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 5.620e-67 Identity = 126/171 (73.68%), Postives = 142/171 (83.04%), Query Frame = 3 Query: 54 MSSEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKD-------------DKSTEDDLKTWDADFVKVDQNTLFDLILAASYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 527 MS+ +KITLKSSDGE FE++E VALESQTIKHM+EDDC D IPLPNVTS ILSKVIEYCK+HVEA + S+++DLKTWD++F+KVDQ TLFDLILAA+YLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDF+P+EEEEVRRENQWAFE Sbjct: 1 MSTVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYCKRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
BLAST of CK938993 vs. ExPASy Swiss-Prot
Match: SKP1A_ARATH (SKP1-like protein 1A OS=Arabidopsis thaliana GN=SKP1A PE=1 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 6.870e-65 Identity = 122/159 (76.73%), Postives = 138/159 (86.79%), Query Frame = 3 Query: 60 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDK---STEDDLKTWDADFVKVDQNTLFDLILAASYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 527 S KKI LKSSDGE+FEVEE VALESQTI HMVEDDC D +PLPNVTS IL+KVIEYCK+HVEA + + + +++DDLK WDADF+K+DQ TLF+LILAA+YLNIK LLDLTCQTVADMIKGKTPEEIR TFNIKNDF+P+EEEEVRRENQWAFE Sbjct: 2 SAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
BLAST of CK938993 vs. ExPASy Swiss-Prot
Match: ASK4_ARATH (SKP1-like protein 4 OS=Arabidopsis thaliana GN=ASK4 PE=1 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 1.639e-58 Identity = 112/160 (70.00%), Postives = 134/160 (83.75%), Query Frame = 3 Query: 60 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGS---GDKKDDKSTE-DDLKTWDADFVKVDQNTLFDLILAASYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 527 ++K I LKSSDGE+FE+EE VA++SQTIKHM+EDDCAD IPLPNVT IL+KVIEYCKKHVEA + GDK S E D+LK WD++FVKVDQ TLFDLILAA+YLNI GLLDLTC+ VAD ++GKTPE++R FNIKND++P+EE EVR EN+WAFE Sbjct: 4 TKKMIILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCKKHVEAAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLILAANYLNIGGLLDLTCKAVADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE 163
BLAST of CK938993 vs. ExPASy Swiss-Prot
Match: ASK3_ARATH (SKP1-like protein 3 OS=Arabidopsis thaliana GN=ASK3 PE=1 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.387e-57 Identity = 111/160 (69.38%), Postives = 132/160 (82.50%), Query Frame = 3 Query: 60 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGS---GDKKDDKSTED-DLKTWDADFVKVDQNTLFDLILAASYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 527 ++K I LKSSDGE+FEVEE VA+ESQTIKHM+EDDC D IPLPNVT IL+KVIEYCKKHVEA + GDK STE+ +LKTWD DFVKVD TLFDL+ AA+YLNI GLLDLTC+ VAD ++GKTP ++R+ FNIKND++P+EE EVR EN+WAFE Sbjct: 4 TKKMIILKSSDGESFEVEEAVAVESQTIKHMIEDDCVDNGIPLPNVTGAILAKVIEYCKKHVEAAAEAGGDKDFYGSTENHELKTWDNDFVKVDHPTLFDLLRAANYLNISGLLDLTCKAVADQMRGKTPAQMREHFNIKNDYTPEEEAEVRNENRWAFE 163
BLAST of CK938993 vs. ExPASy Swiss-Prot
Match: ASK11_ARATH (SKP1-like protein 11 OS=Arabidopsis thaliana GN=ASK11 PE=1 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 6.032e-53 Identity = 104/156 (66.67%), Postives = 123/156 (78.85%), Query Frame = 3 Query: 60 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAASYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 527 S K I L SSDG++FEVEE VA++SQTI HMVEDDC IPL NV S IL KVIEYCKKH + + +E+DL WD F+ ++Q+T+F+LILAA+YLNIK LLDLTCQTVADMIKGKTPEEIR TFNI+NDF+P+EEE VR+ENQWAFE Sbjct: 2 SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKHHV-----DEANPISEEDLNNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152
BLAST of CK938993 vs. ExPASy Swiss-Prot
Match: ASK12_ARATH (SKP1-like protein 12 OS=Arabidopsis thaliana GN=ASK12 PE=1 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.994e-52 Identity = 104/157 (66.24%), Postives = 123/157 (78.34%), Query Frame = 3 Query: 60 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKK-HVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAASYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 527 S K I L SSDG++FEVEE VA++SQTI HMVEDDC IPL NV S IL KVIEYCKK HV+ + +E+DL WD F+ ++Q+T+F+LILAA+YLNIK L DLTCQTVADMIKGKTPEEIR TFNI+NDF+P+EEE VR+ENQWAFE Sbjct: 2 SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKYHVDEAN------PISEEDLNKWDEKFMDLEQSTIFELILAANYLNIKSLFDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152
BLAST of CK938993 vs. ExPASy Swiss-Prot
Match: ASK13_ARATH (SKP1-like protein 13 OS=Arabidopsis thaliana GN=ASK13 PE=1 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.372e-49 Identity = 96/156 (61.54%), Postives = 122/156 (78.21%), Query Frame = 3 Query: 66 KKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTEDDLKTWDADFVKV--DQNTLFDLILAASYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 527 K + L SSDGE+F+VEE VA++SQTI HM+EDDC +P+ NVT ILSKVIEYCKKHV + S ++ ++D+LK WDA+F+K +TLFD++LAA+YLNIK LLDL CQTVADMI GK P+EIR I+NDF+P+EEEE+R+ENQWAFE Sbjct: 3 KMVMLLSSDGESFQVEEAVAVQSQTIAHMIEDDCVANGVPIANVTGVILSKVIEYCKKHVVSDSPTEE----SKDELKKWDAEFMKALEQSSTLFDVMLAANYLNIKDLLDLGCQTVADMITGKKPDEIRALLGIENDFTPEEEEEIRKENQWAFE 154
BLAST of CK938993 vs. ExPASy Swiss-Prot
Match: ASK14_ARATH (SKP1-like protein 14 OS=Arabidopsis thaliana GN=ASK14 PE=1 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.900e-47 Identity = 97/157 (61.78%), Postives = 119/157 (75.80%), Query Frame = 3 Query: 60 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTEDDLKTWDADFVK-VDQNTLFDLILAASYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 527 S KI L SSDGE+FEVEE VA + + ++HM+EDDC T +PL NVT ILS V+EYCKKHV D++S D+ KTWD +F+K DQ T+F L+LAA+YLNIKGLLDL+ QTVAD IK KTPEEIR+ FNI+NDF+P+EE VR+EN WAFE Sbjct: 2 SSNKIVLSSSDGESFEVEEAVARKLKIVEHMIEDDCVVTEVPLQNVTGKILSIVVEYCKKHVV-------DEES--DEFKTWDEEFMKKFDQPTVFQLLLAANYLNIKGLLDLSAQTVADRIKDKTPEEIREIFNIENDFTPEEEAAVRKENAWAFE 149
BLAST of CK938993 vs. ExPASy Swiss-Prot
Match: ASK10_ARATH (SKP1-like protein 10 OS=Arabidopsis thaliana GN=ASK10 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 8.437e-47 Identity = 96/157 (61.15%), Postives = 114/157 (72.61%), Query Frame = 3 Query: 60 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKH-VEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAASYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 527 S KKI LKSSDG +FEVEE A + QTI HM EDDC D IPLP VT IL VIEYC KH V+A + +++DLK WD +F++ Q+T+FDLI+AA+YLNIK LLDL CQTVADMIK T E RK FNI+ND++ +EEE VRRENQW FE Sbjct: 2 STKKIILKSSDGHSFEVEEEAACQCQTIAHMSEDDCTDNGIPLPEVTGKILEMVIEYCNKHHVDAAN------PCSDEDLKKWDKEFMEKYQSTIFDLIMAANYLNIKSLLDLACQTVADMIKDNTVEHTRKFFNIENDYTHEEEEAVRRENQWGFE 152
BLAST of CK938993 vs. ExPASy Swiss-Prot
Match: ASK15_ARATH (SKP1-like protein 15 OS=Arabidopsis thaliana GN=ASK15 PE=2 SV=2) HSP 1 Score: 186.808 bits (473), Expect = 1.102e-46 Identity = 96/166 (57.83%), Postives = 120/166 (72.29%), Query Frame = 3 Query: 60 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGD--------KKDDKSTEDDLKTWDADFVK-VDQNTLFDLILAASYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEE-VRRENQWAFE 527 S KI L SSDGE+F+VEE VA + Q +KH++EDDC IPL NVT ILS V+EYCKKHV+ D KK D + +L WDA+F+K +D T+F LILAA+YLN++GLL LTCQTVAD IK KTPEE+R+ FNI+NDF+ +EEEE +R+EN WAFE Sbjct: 2 SSNKIVLTSSDGESFQVEEVVARKLQIVKHLLEDDCVINEIPLQNVTGNILSIVLEYCKKHVDDVVDDDASEEPKKKKPDDEAKQNLDAWDAEFMKNIDMETIFKLILAANYLNVEGLLGLTCQTVADYIKDKTPEEVRELFNIENDFTHEEEEEAIRKENAWAFE 167 The following BLAST results are available for this feature:
BLAST of CK938993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938993 ID=CK938993; Name=CK938993; organism=Citrus sinensis; type=EST; length=761bpback to top |