CN187932
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187932 vs. ExPASy Swiss-Prot
Match: NH2L1_XENTR (NHP2-like protein 1 OS=Xenopus tropicalis GN=nhp2l1 PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 4.824e-44 Identity = 92/128 (71.88%), Postives = 102/128 (79.69%), Query Frame = 2 Query: 56 MTGEAVNPKAYPLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKLLI 439 MT VNPKAYPLAD+ LT T+LDLVQQAANYKQL+KGANEATKTLNRGI+EFIVMAAD EDKNVPYVFV SKQALGRACGV+RPVIAC+VT E SQLK QIQ L+ +IE+LL+ Sbjct: 1 MTEPEVNPKAYPLADAQLTKTLLDLVQQAANYKQLRKGANEATKTLNRGIAEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACAVTIKEGSQLKPQIQSLQQSIERLLV 128
BLAST of CN187932 vs. ExPASy Swiss-Prot
Match: NH2L1_XENLA (NHP2-like protein 1 OS=Xenopus laevis GN=nhp2l1 PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 4.824e-44 Identity = 92/128 (71.88%), Postives = 102/128 (79.69%), Query Frame = 2 Query: 56 MTGEAVNPKAYPLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKLLI 439 MT VNPKAYPLAD+ LT T+LDLVQQ+ANYKQL+KGANEATKTLNRGI+EFIVMAAD EDKNVPYVFV SKQALGRACGV+RPVIACSVT E SQLK QIQ ++ AIE+LL+ Sbjct: 1 MTEPEVNPKAYPLADAQLTKTLLDLVQQSANYKQLRKGANEATKTLNRGIAEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKPQIQSVQQAIERLLV 128
BLAST of CN187932 vs. ExPASy Swiss-Prot
Match: NH2L1_RAT (NHP2-like protein 1 OS=Rattus norvegicus GN=Nhp2l1 PE=2 SV=4) HSP 1 Score: 174.481 bits (441), Expect = 5.333e-43 Identity = 90/128 (70.31%), Postives = 101/128 (78.91%), Query Frame = 2 Query: 56 MTGEAVNPKAYPLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKLLI 439 MT VNPKAYPLAD++LT +LDLVQQ+ NYKQL+KGANEATKTLNRGISEFIVMAAD EDKNVPYVFV SKQALGRACGV+RPVIACSVT E SQLK QIQ ++ +IE+LL+ Sbjct: 1 MTEADVNPKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKQQIQSIQQSIERLLV 128
BLAST of CN187932 vs. ExPASy Swiss-Prot
Match: NH2L1_MOUSE (NHP2-like protein 1 OS=Mus musculus GN=Nhp2l1 PE=2 SV=4) HSP 1 Score: 174.481 bits (441), Expect = 5.333e-43 Identity = 90/128 (70.31%), Postives = 101/128 (78.91%), Query Frame = 2 Query: 56 MTGEAVNPKAYPLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKLLI 439 MT VNPKAYPLAD++LT +LDLVQQ+ NYKQL+KGANEATKTLNRGISEFIVMAAD EDKNVPYVFV SKQALGRACGV+RPVIACSVT E SQLK QIQ ++ +IE+LL+ Sbjct: 1 MTEADVNPKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKQQIQSIQQSIERLLV 128
BLAST of CN187932 vs. ExPASy Swiss-Prot
Match: NH2L1_MACFA (NHP2-like protein 1 OS=Macaca fascicularis GN=NHP2L1 PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.333e-43 Identity = 90/128 (70.31%), Postives = 101/128 (78.91%), Query Frame = 2 Query: 56 MTGEAVNPKAYPLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKLLI 439 MT VNPKAYPLAD++LT +LDLVQQ+ NYKQL+KGANEATKTLNRGISEFIVMAAD EDKNVPYVFV SKQALGRACGV+RPVIACSVT E SQLK QIQ ++ +IE+LL+ Sbjct: 1 MTEADVNPKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKQQIQSIQQSIERLLV 128
BLAST of CN187932 vs. ExPASy Swiss-Prot
Match: NH2L1_HUMAN (NHP2-like protein 1 OS=Homo sapiens GN=NHP2L1 PE=1 SV=3) HSP 1 Score: 174.481 bits (441), Expect = 5.333e-43 Identity = 90/128 (70.31%), Postives = 101/128 (78.91%), Query Frame = 2 Query: 56 MTGEAVNPKAYPLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKLLI 439 MT VNPKAYPLAD++LT +LDLVQQ+ NYKQL+KGANEATKTLNRGISEFIVMAAD EDKNVPYVFV SKQALGRACGV+RPVIACSVT E SQLK QIQ ++ +IE+LL+ Sbjct: 1 MTEADVNPKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKQQIQSIQQSIERLLV 128
BLAST of CN187932 vs. ExPASy Swiss-Prot
Match: NH2L1_CAEEL (NHP2-like protein 1 homolog OS=Caenorhabditis elegans GN=M28.5 PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.333e-43 Identity = 89/128 (69.53%), Postives = 101/128 (78.91%), Query Frame = 2 Query: 56 MTGEAVNPKAYPLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKLLI 439 M + VNPKA+PLAD+NL+ ++DLVQQA NYKQLKKGANEATKTLNRGISE IVMAAD EDKNVPYVFV SK ALGRACGVTRPVIA S+T NE SQLK+QIQ++K+ +EKLLI Sbjct: 1 MADDGVNPKAFPLADTNLSQKLMDLVQQAMNYKQLKKGANEATKTLNRGISEIIVMAADAEPLEILLHLPLLCEDKNVPYVFVRSKAALGRACGVTRPVIAASITQNEGSQLKSQIQKIKEDVEKLLI 128
BLAST of CN187932 vs. ExPASy Swiss-Prot
Match: NH2L1_BOVIN (NHP2-like protein 1 OS=Bos taurus GN=NHP2L1 PE=2 SV=3) HSP 1 Score: 174.481 bits (441), Expect = 5.333e-43 Identity = 90/128 (70.31%), Postives = 101/128 (78.91%), Query Frame = 2 Query: 56 MTGEAVNPKAYPLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKLLI 439 MT VNPKAYPLAD++LT +LDLVQQ+ NYKQL+KGANEATKTLNRGISEFIVMAAD EDKNVPYVFV SKQALGRACGV+RPVIACSVT E SQLK QIQ ++ +IE+LL+ Sbjct: 1 MTEADVNPKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKQQIQSIQQSIERLLV 128
BLAST of CN187932 vs. ExPASy Swiss-Prot
Match: SNU13_SCHPO (13 kDa ribonucleoprotein-associated protein OS=Schizosaccharomyces pombe GN=snu13 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.188e-42 Identity = 91/124 (73.39%), Postives = 101/124 (81.45%), Query Frame = 2 Query: 68 AVNPKAYPLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKLLI 439 +VNPKA+PLADS LT ILDLVQQA++YKQL+KGANEATKTLNRGISEFIVMAADT EDKNVPYVFVPSK ALGRACGV+RPVI+ S+T+NEAS L QIQ +K AIEKLLI Sbjct: 2 SVNPKAFPLADSGLTQQILDLVQQASHYKQLRKGANEATKTLNRGISEFIVMAADTEPIEILLHLPLLCEDKNVPYVFVPSKAALGRACGVSRPVISASITTNEASDLLPQIQAIKLAIEKLLI 125
BLAST of CN187932 vs. ExPASy Swiss-Prot
Match: SNU13_CANAL (13 kDa ribonucleoprotein-associated protein OS=Candida albicans GN=SNU13 PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 6.520e-41 Identity = 88/124 (70.97%), Postives = 97/124 (78.23%), Query Frame = 2 Query: 68 AVNPKAYPLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKLLI 439 A NPKA+PLADS LT ILD+VQQ+ N +QLKKGANEATKTLNRGISEFI+MAADT EDKNVPYVFVPSK ALGRACGV+RPVIA SVTSN+AS +K QI +KD IE LLI Sbjct: 3 APNPKAFPLADSALTQQILDVVQQSQNLRQLKKGANEATKTLNRGISEFIIMAADTEPIEILLHLPLLCEDKNVPYVFVPSKAALGRACGVSRPVIAASVTSNDASSIKNQIYGIKDKIETLLI 126 The following BLAST results are available for this feature:
BLAST of CN187932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187932 ID=CN187932; Name=CN187932; organism=Citrus sinensis; type=EST; length=738bpback to top |