CX675565

Overview
NameCX675565
Unique NameCX675565
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length794
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675565 vs. ExPASy Swiss-Prot
Match: RETOL_ARATH (Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2)

HSP 1 Score: 282.722 bits (722), Expect = 1.575e-75
Identity = 136/239 (56.90%), Postives = 179/239 (74.90%), Query Frame = 1
Query:   88 TNSDSVEDSFIHCLNSNSDLSVPFSTFCD----QTNSSFGSILQSSAQNLRYLTPSMPKPEFIFTPLYESHVQAAVICSKQLGIHLRVRSGGHDYEGLSYVSEIETPFIIVDLARLRAISVDIESNSAWVQTGATIGEVYYRIAEKSKIHGFPAGLCTSLGVGGHITGGAYGSMMRKYGLGADNVLDARIVDANGKILDREAMGEDLFWAIRGGGGASFGIILSWKIKLVPVPETVTVF 792
            + S+SV +SF+ C +  +    P S   D    QTN +F S+L++  +N R+ T S  KP  I TP  ESHV AAV CSK L   L++RSGGHDY+GLSY+S+   PF I+D++ +R +SVDI SNSAW+  GAT+GEVYYRI EKS++HGFPAG+C ++GVGGH++GG YG+M+RK+GL  D V DA+IVD NG++LDR+AMGEDLFWAI GGGG S+G++L +K+KLVPVP  VTVF
Sbjct:   30 SQSNSVYNSFLKCFSDKT--KSPQSQITDNVFSQTNPAFSSVLRAYIRNARFNTSSTLKPTIIITPRSESHVSAAVTCSKTLNFLLKIRSGGHDYDGLSYISD--KPFFILDMSNIRDVSVDIASNSAWISAGATLGEVYYRIWEKSRVHGFPAGVCPTVGVGGHLSGGGYGNMVRKFGLSVDYVEDAKIVDVNGRVLDRKAMGEDLFWAITGGGGGSYGVVLGYKVKLVPVPSVVTVF 264          
BLAST of CX675565 vs. ExPASy Swiss-Prot
Match: RETO_PAPSO (Reticuline oxidase OS=Papaver somniferum GN=BBE1 PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 5.810e-62
Identity = 115/223 (51.57%), Postives = 157/223 (70.40%), Query Frame = 1
Query:  124 CLNSNSDLSVPFSTFCDQTNSSFGSILQSSAQNLRYLTPSMPKPEFIFTPLYESHVQAAVICSKQLGIHLRVRSGGHDYEGLSYVSEIETPFIIVDLARLRAISVDIESNSAWVQTGATIGEVYYRIAEKSKIHGFPAGLCTSLGVGGHITGGAYGSMMRKYGLGADNVLDARIVDANGKILDREAMGEDLFWAIRGGGGASFGIILSWKIKLVPVPETVTVF 792
            CLNS+   +  F+T    TNS +  +L +S QN  +  P++ KP FI  P  +  + + V C  +    +R+RSGGH YEGLSY ++  TPF+IVD+  L  IS+D+ S +AWV++GAT+GE+YY IA+ +   GF AG C ++G GGHI+GG +G M RKYGL ADNV+DA ++D+NG ILDRE MG+D+FWAIRGGGG  +G I +WKIKL+PVPE +TVF
Sbjct:   34 CLNSHGVHN--FTTLSTDTNSDYFKLLHASMQNPLFAKPTVSKPSFIVMPGSKEELSSTVHCCTRESWTIRLRSGGHSYEGLSYTAD--TPFVIVDMMNLNRISIDVLSETAWVESGATLGELYYAIAQSTDTLGFTAGWCPTVGSGGHISGGGFGMMSRKYGLAADNVVDAILIDSNGAILDREKMGDDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKLTVF 252          
BLAST of CX675565 vs. ExPASy Swiss-Prot
Match: RETO_ESCCA (Reticuline oxidase OS=Eschscholzia californica GN=BBE1 PE=1 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.582e-59
Identity = 113/228 (49.56%), Postives = 152/228 (66.67%), Query Frame = 1
Query:  109 DSFIHCLNSNSDLSVPFSTFCDQTNSSFGSILQSSAQNLRYLTPSMPKPEFIFTPLYESHVQAAVICSKQLGIHLRVRSGGHDYEGLSYVSEIETPFIIVDLARLRAISVDIESNSAWVQTGATIGEVYYRIAEKSKIHGFPAGLCTSLGVGGHITGGAYGSMMRKYGLGADNVLDARIVDANGKILDREAMGEDLFWAIRGGGGASFGIILSWKIKLVPVPETVTVF 792
            +  + CL  N   +   + F   ++S F   L  S QN  +    + KP  I  P  +  +   + C ++    +R+RSGGH YEGLSY S+  TPFI++DL  L  +S+D+ES +AWV++G+T+GE+YY I E S   GF AG C ++G GGHI+GG +G M RKYGL ADNV+DA ++DANG ILDR+AMGED+FWAIRGGGG  +G I +WKIKL+PVPE VTVF
Sbjct:   25 NDLLSCLTFNGVRN--HTVFSADSDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRSGGHSYEGLSYTSD--TPFILIDLMNLNRVSIDLESETAWVESGSTLGELYYAITESSSKLGFTAGWCPTVGTGGHISGGGFGMMSRKYGLAADNVVDAILIDANGAILDRQAMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVF 248          
BLAST of CX675565 vs. ExPASy Swiss-Prot
Match: YVDP_BACSU (Uncharacterized FAD-linked oxidoreductase yvdP OS=Bacillus subtilis GN=yvdP PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.730e-19
Identity = 63/172 (36.63%), Postives = 96/172 (55.81%), Query Frame = 1
Query:  289 VQAAVICSKQLGIHLRVRSGGHDYE-GLSYVSEIETPFIIVDLARLRAISVDIESNSAWVQTGATIGEVYYRIAEKSKIHGF--PAGLCTSLGVGGHITGGAYGSMMRKYGLGADNVLDARIVDANGKILDR-EAMGEDLFWAIRGGGGASFGIILSWKIKLVPVPETVTVF 792
            V  A+  +++  + LRVRSG H  +  LS VS      I++D++ +  + +D E+  A VQTG  +G +   +A      GF  P G   ++G+GG   GG +G + R  GL +DN+L  + VDA G+I+   ++  EDL WA RGGGG +FG    +  K+   P+T TVF
Sbjct:   45 VSNAIKWARENKVPLRVRSGRHALDKNLSVVSG----GIVIDVSDMNKVFLDEENAIATVQTGIPVGPLVKGLARD----GFMAPFGDSPTVGIGGITMGGGFGVLSRSIGLISDNLLALKTVDAKGRIIHADQSHNEDLLWASRGGGGGNFGYNTQYTFKVHRAPKTATVF 208          
BLAST of CX675565 vs. ExPASy Swiss-Prot
Match: YGAK_BACSU (Uncharacterized FAD-linked oxidoreductase ygaK OS=Bacillus subtilis GN=ygaK PE=3 SV=4)

HSP 1 Score: 87.4261 bits (215), Expect = 9.711e-17
Identity = 51/161 (31.68%), Postives = 88/161 (54.66%), Query Frame = 1
Query:  325 IHLRVRSGGHDYEGLSYVSEIETPFIIVDLARLRAISVDIESNSAWVQTGATIGEVYYRIAEKSKIHGFPAGLCTSLGVGGHITGGAYGSMMRKYGLGADNVLDARIVDANGK-----ILDREAMGEDLFWAIRGGGGASFGIILSWKIKLVPVPETVTVF 792
            +  R+R G H YE  S ++      +++DL+ ++ I+V+ +   A+++ GA +GEVY  + +       PAG   ++G+ G   GG  G + R  GL  D+++   ++ A+ K     I    +   DLFWA +GGGG +FGI+ S   K VP+ + V++F
Sbjct:   57 VPFRIRGGRHSYENFSLLNN----GLVIDLSEMKKITVNQDKKLAYIEAGAELGEVYRTLWQYGLT--LPAGTIANVGLTGLTLGGGIGLLTRAAGLTCDSLVQLEMIVADEKEGADLITVSCSNHPDLFWASQGGGGGNFGIVTSMTFKAVPISQ-VSIF 210          
BLAST of CX675565 vs. ExPASy Swiss-Prot
Match: MCRA_STRLA (Mitomycin radical oxidase OS=Streptomyces lavendulae GN=mcrA PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 3.454e-14
Identity = 53/177 (29.94%), Postives = 93/177 (52.54%), Query Frame = 1
Query:  250 KPEFIFTPLYESHVQAAVICSKQLGIHLRVRSGGHDYEGLSYVSEIETPFIIVDLARLRAISVDIESNSAWVQTGATIGEVYYRIAEKSKIHGFPA--GLCTSLGVGGHITGGAYGSMMRKYGLGADNVLDARIVDANGKILDREA-MGEDLFWAIRGGGGASFGIILSWKIKLVPV 771
            +P ++     E  V AAV  + +    + V + GH   G S  ++     ++V+  R+  +SVD    +AW++ GA     + ++ E +  HG     G   ++G  G++ GG  G + R++G  AD+V   R+V A+G++ D  A    DLFWA+RGG   +FG+++  ++ L PV
Sbjct:   30 RPAYVVEAADEQEVAAAVRLAAEQKRPVGVMATGH---GPSVSAD---DAVLVNTRRMEGVSVDAARATAWIEAGAR----WRKVLEHTAPHGLAPLNGSSPNVGAVGYLVGGGAGLLGRRFGYAADHVRRLRLVTADGRLRDVTAGTDPDLFWAVRGGKD-NFGLVVGMEVDLFPV 195          
BLAST of CX675565 vs. ExPASy Swiss-Prot
Match: Y8969_DICDI (FAD-linked oxidoreductase DDB_G0289697 OS=Dictyostelium discoideum GN=DDB_G0289697 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.233e-12
Identity = 54/188 (28.72%), Postives = 94/188 (50.00%), Query Frame = 1
Query:  220 NLRYLTPSMPKPEFIFTPLYESHVQAAVICSKQLGIHLRVRSGGHDYEGLSYVSEIETPFIIVDLARLRAISVDIESNSAWVQTGATIGEVYYRIAEKSKIH-GFPAGLCTSLGVGGHITGGAYGSMMRKYGLGADNVLDARIVDANGKILD-REAMGEDLFWAIRGGGGASFGIILSWKIKLVPVPE 777
            N R+    +  P  I  P     V  AV  S++  +   V +G H ++            ++++++ ++ I VD  S +  V+TG T+G++     E SK   G P+G  +  G+GG   GG  G + R  GL +DN++   +V+  G+I    +   ++L +AIR G G++FG+I  +  KL PV +
Sbjct:   37 NKRWNIDVVNTPLLIVYPKNIQDVVKAVNFSRECQLDFAVIAGAHGFKSTCDNG------LLLNISSMKNIKVDEASKTVVVETGCTLGDLD---KETSKFGLGIPSGHVSHTGLGGLTLGGGIGHLSRSLGLTSDNLIGCTLVNYKGEIEKVTDQSNKELIYAIR-GAGSNFGVITDFTFKLHPVKD 214          
BLAST of CX675565 vs. ExPASy Swiss-Prot
Match: HDNO_ARTOX (6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxidans PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.514e-12
Identity = 54/182 (29.67%), Postives = 90/182 (49.45%), Query Frame = 1
Query:  244 MPKPEFIFTPLYESHVQAAVICSKQLGIHLRVRSGGHDYEGLSYVSEIETPFIIVDLARLRAISVDIESNSAWVQTGATIGEVYYRIAEKSKIHGFPA--GLCTSLGVGGHITGGAYGSMMRKYGLGADNVLDARIVDANGKIL---DREAMGEDLFWAIRGGGGASFGIILSWKIKLVPVP 774
            + +P  I   L    V  +V  +   G+ + VRSGGH+  G +         I++DL  + +I +D   + A +  G   G++   + E +K  G  A  G+   +G  G    G  G +  KYGL +DN+L A +V A G ++   D E    +LFWA+R G G +FG++   +++L  +P
Sbjct:   35 LQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYA----TNDGGIVLDLRLMNSIHIDTAGSRARIGGGVISGDL---VKEAAKF-GLAAVTGMHPKVGFCGLALNGGVGFLTPKYGLASDNILGATLVTATGDVIYCSDDER--PELFWAVR-GAGPNFGVVTEVEVQLYELP 205          
The following BLAST results are available for this feature:
BLAST of CX675565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
RETOL_ARATH1.575e-7556.90Reticuline oxidase-like protein OS=Arabidopsis tha... [more]
RETO_PAPSO5.810e-6251.57Reticuline oxidase OS=Papaver somniferum GN=BBE1 P... [more]
RETO_ESCCA1.582e-5949.56Reticuline oxidase OS=Eschscholzia californica GN=... [more]
YVDP_BACSU2.730e-1936.63Uncharacterized FAD-linked oxidoreductase yvdP OS=... [more]
YGAK_BACSU9.711e-1731.68Uncharacterized FAD-linked oxidoreductase ygaK OS=... [more]
MCRA_STRLA3.454e-1429.94Mitomycin radical oxidase OS=Streptomyces lavendul... [more]
Y8969_DICDI3.233e-1228.72FAD-linked oxidoreductase DDB_G0289697 OS=Dictyost... [more]
HDNO_ARTOX5.514e-1229.676-hydroxy-D-nicotine oxidase OS=Arthrobacter oxida... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_63B04_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-63B04-C7-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675565 ID=CX675565; Name=CX675565; organism=Citrus sinensis; type=EST; length=794bp
GAACTTGGAACAATAAAAGAAATGGCGTTTCCAAGCAGCTATATTCTTTC
ATTACTTTTAATCCTTTTGTTATCATCAGCTTCACGGACAAATTCAGATT
CAGTTGAAGACAGTTTTATCCATTGCCTCAATTCCAATTCTGATCTTTCA
GTTCCTTTCTCAACCTTCTGCGACCAAACAAATTCTTCATTTGGTTCTAT
CCTACAATCCTCTGCTCAAAACCTCAGGTACTTGACGCCTTCAATGCCAA
AACCTGAGTTTATCTTCACACCTTTATACGAATCCCATGTCCAAGCCGCT
GTTATTTGCTCCAAACAGCTTGGAATCCATCTTAGAGTTCGAAGCGGAGG
CCATGATTATGAGGGTCTTTCTTATGTTTCCGAAATTGAAACACCCTTCA
TTATTGTAGACCTTGCCAGGCTTCGAGCCATAAGCGTTGATATTGAAAGT
AATAGCGCCTGGGTTCAAACTGGCGCCACGATCGGTGAAGTTTATTACAG
AATTGCTGAAAAAAGCAAAATCCATGGCTTTCCTGCTGGTCTTTGCACAA
GCTTAGGCGTTGGTGGGCACATAACAGGCGGTGCTTATGGCTCCATGATG
AGAAAATACGGCCTGGGAGCTGACAATGTCCTGGATGCCCGAATTGTTGA
TGCTAATGGCAAGATTCTCGACAGAGAAGCTATGGGAGAAGATCTATTTT
GGGCTATTAGAGGCGGAGGAGGAGCAAGCTTCGGAATTATTCTTTCCTGG
AAGATAAAACTCGTTCCAGTTCCGGAAACTGTGACTGTGTTTAC
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