CK938855
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK938855 vs. ExPASy Swiss-Prot
Match: NFYC9_ARATH (Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana GN=NFYC9 PE=2 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 8.138e-64 Identity = 126/173 (72.83%), Postives = 138/173 (79.77%), Query Frame = 3 Query: 42 SFWANQYQEIEKVNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASIPRGTLPVGGPPDMPPYCYMPTQHASQVGSAGMIMGKPVMDPAIYAQQSHPYMGQQMWPQGADQQ 560 +FW NQ++EIEK DFKNHSLPLARIKKIMKADEDVRMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DEVL SIPRGT+P PY Y+P A +G+ GM+MG P A +PYMGQ MW Q A Q Sbjct: 61 AFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGSIPRGTVPEAAAAGY-PYGYLPAGTA-PIGNPGMVMGNPG-----GAYPPNPYMGQPMWQQQAPDQ 226
BLAST of CK938855 vs. ExPASy Swiss-Prot
Match: NFYC3_ARATH (Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana GN=NFYC3 PE=1 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 3.200e-60 Identity = 120/178 (67.42%), Postives = 134/178 (75.28%), Query Frame = 3 Query: 42 SFWANQYQEIEKVNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASIPRGTLPVGGPPDMPPYCYMPTQHASQVGSAGMIMGKPVMDPAIYAQQSHPYMGQQMWPQGADQQRSPSD 575 SFW Q++EIEK DFKNHSLPLARIKKIMKADEDVRMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DEVL + G PY Y+P A +G+ GM+MG P P +PYMGQ MW Q +Q+ P + Sbjct: 51 SFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGGVGAEAATAAG----YPYGYLPPGTA-PIGNPGMVMGNPGAYP------PNPYMGQPMWQQPGPEQQDPDN 217
BLAST of CK938855 vs. ExPASy Swiss-Prot
Match: NFYC1_ARATH (Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana GN=NFYC1 PE=1 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 7.146e-52 Identity = 105/155 (67.74%), Postives = 121/155 (78.06%), Query Frame = 3 Query: 45 FWANQYQEIEKVNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASIPRGTLPVGGPPDMPPYCYMPTQHASQVGSAGMIMGKPVMDP-AIYAQ 506 FW Q QEIE+VNDFKNH LPLARIKKIMKADEDVRMISAEAP++FA+ACE+FILELT+RSW H EENKRRTLQKNDIAAAITRTDIFDFLVDIVPR+++KDE A++ G + V PY Y P G GM++G+P MDP +Y Q Sbjct: 47 FWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDE--AAVLGGGMVVAPTASGVPYYYPPM--GQPAGPGGMMIGRPAMDPNGVYVQ 197
BLAST of CK938855 vs. ExPASy Swiss-Prot
Match: NFYC4_ARATH (Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana GN=NFYC4 PE=2 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 4.632e-51 Identity = 108/170 (63.53%), Postives = 123/170 (72.35%), Query Frame = 3 Query: 45 FWANQYQEIEKVNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEV-LASIPRGTLPVGGPPDMPPYCYMPTQHASQVGSAGMIMGKPVMDPAIYAQQSHPYMGQQMWPQGA 551 FW Q QEIE+VNDFKNH LPLARIKKIMKADEDVRMISAEAP++FA+ACE+FILELT+RSW H EENKRRTLQKNDIAAAITRTDIFDFLVDIVPRE++K+E AS G V PY Y P + G GM++G+P MDP+ Q Q +W A Sbjct: 60 FWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREEIKEEEDAASALGGGGMVAPAASGVPYYYPPMGQPAVPG--GMMIGRPAMDPSGVYAQPPSQAWQSVWQNSA 227
BLAST of CK938855 vs. ExPASy Swiss-Prot
Match: NFYC2_ARATH (Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana GN=NFYC2 PE=1 SV=2) HSP 1 Score: 196.438 bits (498), Expect = 1.946e-49 Identity = 101/136 (74.26%), Postives = 114/136 (83.82%), Query Frame = 3 Query: 45 FWANQYQEIEKVNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASIPRGTLP--VGGPPDMPPYCYMPTQHASQ 446 FWANQ QEIE DFKNH+LPLARIKKIMKADEDVRMISAEAPVIFA+ACEMFILELTLR+W HTEENKRRTLQKNDIAAAI+RTD+FDFLVDI+PR++LK+E L + +GT+P VG PPY Y+ Q Q Sbjct: 58 FWANQMQEIEHTTDFKNHTLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGL-GVTKGTIPSVVGS----PPYYYLQQQGMMQ 188
BLAST of CK938855 vs. ExPASy Swiss-Prot
Match: NFYC6_ARATH (Nuclear transcription factor Y subunit C-6 OS=Arabidopsis thaliana GN=NFYC6 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 6.720e-34 Identity = 81/172 (47.09%), Postives = 108/172 (62.79%), Query Frame = 3 Query: 42 SFWANQYQEIEKVNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASIPRGTLPVGGPP--DMPPYCYMPTQHASQVGSAGMIMGKPVMDPAIYAQQSHPYMGQQMWPQGA 551 ++W Q +E V+DFKN LPLARIKKIMKAD DV M+SAEAP+IFA+ACEMFI++LT+RSW EENKR TLQK+DI+ A+ + +DFL+D+VP KDE +A+ G + + P +P Y Y P G++MG P++ +YA Q WP A Sbjct: 38 NYWIEQ---METVSDFKNRQLPLARIKKIMKADPDVHMVSAEAPIIFAKACEMFIVDLTMRSWLKAEENKRHTLQKSDISNAVASSFTYDFLLDVVP----KDESIATADPGFVAMPHPDGGGVPQYYYPP----------GVVMGTPMVGSGMYAP-------SQAWPAAA 185
BLAST of CK938855 vs. ExPASy Swiss-Prot
Match: NFYC_RAT (Nuclear transcription factor Y subunit gamma OS=Rattus norvegicus GN=Nfyc PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.553e-33 Identity = 71/104 (68.27%), Postives = 85/104 (81.73%), Query Frame = 3 Query: 42 SFWANQYQEIEK--VNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLK 347 SFW +EI V DF+ LPLARIKKIMK DEDV+MISAEAPV+FA+A ++FI ELTLR+W HTE+NKRRTLQ+NDIA AIT+ D FDFL+DIVPR++LK Sbjct: 21 SFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELK 124
BLAST of CK938855 vs. ExPASy Swiss-Prot
Match: NFYC_PONAB (Nuclear transcription factor Y subunit gamma OS=Pongo abelii GN=NFYC PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.553e-33 Identity = 71/104 (68.27%), Postives = 85/104 (81.73%), Query Frame = 3 Query: 42 SFWANQYQEIEK--VNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLK 347 SFW +EI V DF+ LPLARIKKIMK DEDV+MISAEAPV+FA+A ++FI ELTLR+W HTE+NKRRTLQ+NDIA AIT+ D FDFL+DIVPR++LK Sbjct: 21 SFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELK 124
BLAST of CK938855 vs. ExPASy Swiss-Prot
Match: NFYC_MOUSE (Nuclear transcription factor Y subunit gamma OS=Mus musculus GN=Nfyc PE=2 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 2.553e-33 Identity = 71/104 (68.27%), Postives = 85/104 (81.73%), Query Frame = 3 Query: 42 SFWANQYQEIEK--VNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLK 347 SFW +EI V DF+ LPLARIKKIMK DEDV+MISAEAPV+FA+A ++FI ELTLR+W HTE+NKRRTLQ+NDIA AIT+ D FDFL+DIVPR++LK Sbjct: 21 SFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELK 124
BLAST of CK938855 vs. ExPASy Swiss-Prot
Match: NFYC_HUMAN (Nuclear transcription factor Y subunit gamma OS=Homo sapiens GN=NFYC PE=1 SV=3) HSP 1 Score: 142.895 bits (359), Expect = 2.553e-33 Identity = 71/104 (68.27%), Postives = 85/104 (81.73%), Query Frame = 3 Query: 42 SFWANQYQEIEK--VNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLK 347 SFW +EI V DF+ LPLARIKKIMK DEDV+MISAEAPV+FA+A ++FI ELTLR+W HTE+NKRRTLQ+NDIA AIT+ D FDFL+DIVPR++LK Sbjct: 21 SFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELK 124 The following BLAST results are available for this feature:
BLAST of CK938855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938855 ID=CK938855; Name=CK938855; organism=Citrus sinensis; type=EST; length=945bpback to top |