FC921798

Overview
NameFC921798
Unique NameFC921798
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length508
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13533 contig Csv1_Contig13533:1..507. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921798 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 4.712e-50
Identity = 90/114 (78.95%), Postives = 104/114 (91.23%), Query Frame = 3
Query:   87 MENFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 428
            ME+FPVI++E +NG ERAA +  IN+ACENWGFFELVNHGI PE MDTVER+TKAHY+KCMEQRFKELVAS+ALEGIQ EV DMDWEST+++RHLPQS I+EVPDLDEEYR+VM
Sbjct:    1 MESFPVINMEKMNGEERAATMGLINDACENWGFFELVNHGIPPELMDTVERVTKAHYKKCMEQRFKELVASKALEGIQAEVTDMDWESTYFLRHLPQSNISEVPDLDEEYRRVM 114          
BLAST of FC921798 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 2.586e-48
Identity = 86/114 (75.44%), Postives = 101/114 (88.60%), Query Frame = 3
Query:   87 MENFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 428
            MENFP+ISL+ +NG ERAA +E I +ACENWGFFELVNHGI  E MDTVE++TK HY+KCMEQRFKELVAS+ALEG+Q EV DMDWESTF+++HLP S I+EVPDLDEEYR+VM
Sbjct:    1 MENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQAEVTDMDWESTFFLKHLPISNISEVPDLDEEYREVM 114          
BLAST of FC921798 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 2.189e-47
Identity = 83/114 (72.81%), Postives = 100/114 (87.72%), Query Frame = 3
Query:   87 MENFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 428
            MENFP+I+LE +NGAER A +EKIN+ACENWGFFELVNHGI  E MDTVE+LTK HY+KCMEQRFKELVA + LEG++ EV DMDWESTF++RHLP S I+++PDLD+ YR+VM
Sbjct:    1 MENFPIINLEKLNGAERVATMEKINDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVAKKGLEGVEVEVTDMDWESTFFLRHLPSSNISQLPDLDDVYREVM 114          
BLAST of FC921798 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 4.876e-47
Identity = 83/114 (72.81%), Postives = 101/114 (88.60%), Query Frame = 3
Query:   87 MENFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 428
            MENFP+I+LE +NG  R A +EKI +ACENWGFFELV+HGI  EF+DTVERLTK HYR+C+EQRFKELVAS+ LE ++TEVNDMDWESTFY+RHLP+S I+EVPDL+++YR VM
Sbjct:    1 MENFPIINLEGLNGEGRKATMEKIKDACENWGFFELVSHGIPTEFLDTVERLTKEHYRQCLEQRFKELVASKGLEAVKTEVNDMDWESTFYLRHLPKSNISEVPDLEDQYRNVM 114          
BLAST of FC921798 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 4.876e-47
Identity = 84/114 (73.68%), Postives = 99/114 (86.84%), Query Frame = 3
Query:   87 MENFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 428
            MENFP+I+LEN+NG ERA  +E I +ACENWGFFELVNHGI  E MDTVE+LTK HY+KCMEQRFKELVAS+ LE +Q EV D+DWESTF++RHLP S I++VPDLDEEYR+VM
Sbjct:    1 MENFPIINLENLNGDERAKTMEMIKDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPTSNISQVPDLDEEYREVM 114          
BLAST of FC921798 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.853e-46
Identity = 83/114 (72.81%), Postives = 99/114 (86.84%), Query Frame = 3
Query:   87 MENFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 428
            MENFP+I+LE +NG+ER A +E I +ACENWGFFELVNHGI  E MDTVE+LTK HY+KCMEQRFKELVAS+ LE +Q EV D+DWESTF++RHLP S I+EVPDLD+EYR+VM
Sbjct:    1 MENFPIINLEKLNGSERDATMEMIKDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPVSNISEVPDLDDEYREVM 114          
BLAST of FC921798 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 5.391e-46
Identity = 83/114 (72.81%), Postives = 98/114 (85.96%), Query Frame = 3
Query:   87 MENFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 428
            MENFP+I+LEN+ GAER A +E I +ACENWGFFELVNHGI  E MDTVE+ TK HY+KCMEQRFKELVAS+ LE +Q EV D+DWESTF++RHLP S I+EVPDLD+EYR+VM
Sbjct:    1 MENFPIINLENLCGAERDATMEMIKDACENWGFFELVNHGIPHEVMDTVEKFTKGHYKKCMEQRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPVSNISEVPDLDDEYREVM 114          
BLAST of FC921798 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 183.341 bits (464), Expect = 5.391e-46
Identity = 82/114 (71.93%), Postives = 98/114 (85.96%), Query Frame = 3
Query:   87 MENFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 428
            MENFP+I+LE +NG ERA  +E I +ACENWGFFELVNHGI  E MDTVE++TK HY+KCMEQRFKELVAS+ LE +Q EV D+DWESTF++RHLP S I++VPDLDEEYR+VM
Sbjct:    1 MENFPIINLEKLNGDERANTMEMIKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPTSNISQVPDLDEEYREVM 114          
BLAST of FC921798 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.049e-45
Identity = 81/114 (71.05%), Postives = 98/114 (85.96%), Query Frame = 3
Query:   87 MENFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 428
            MENFP+I+LE +NG+ERA  +E I +ACENWGFFELVNHGI  E MDTVE++TK HY+KCMEQRFKELVAS+ LE +Q EV D+DWESTF++RHLP S I EVPDLD++YR+VM
Sbjct:    1 MENFPIINLEKLNGSERADTMEMIKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPVSNICEVPDLDDQYREVM 114          
BLAST of FC921798 vs. ExPASy Swiss-Prot
Match: ACCO_ACTDE (1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.017e-44
Identity = 78/114 (68.42%), Postives = 97/114 (85.09%), Query Frame = 3
Query:   87 MENFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 428
            ME FPVI +E +NG ERA  +EKI +ACENWGFFELVNHGI  E MDTVERLTK HY KCMEQRFKE+VA++ LE +Q+E+ND+DWESTF++RHLP S I+E+PDL++++RK M
Sbjct:    1 MEAFPVIDMEKLNGEERAPTMEKIKDACENWGFFELVNHGISHELMDTVERLTKEHYNKCMEQRFKEMVATKGLEAVQSEINDLDWESTFFLRHLPVSNISEIPDLEQDHRKAM 114          
The following BLAST results are available for this feature:
BLAST of FC921798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
ACCO_DIOKA4.712e-5078.951-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
ACCO1_PETHY2.586e-4875.441-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
ACCO2_SOLLC2.189e-4772.811-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO_PRUMU4.876e-4772.811-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]
ACCO4_SOLLC4.876e-4773.681-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
ACCO3_PETHY1.853e-4672.811-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCO4_PETHY5.391e-4672.811-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO1_SOLLC5.391e-4671.931-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
ACCO_TOBAC2.049e-4571.051-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
ACCO_ACTDE1.017e-4468.421-aminocyclopropane-1-carboxylate oxidase OS=Actin... [more]

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Properties
Property NameValue
Genbank descriptionC06052E03T7 RindPdigS Citrus sinensis cDNA clone C06052E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921798 ID=FC921798; Name=FC921798; organism=Citrus sinensis; type=EST; length=508bp
CGCGGGGAATTAACAAGCTCACAAACACATACACAAACACAAACACTCAC
AAACACACAGCCTTGTTAAAGAAAGAATTCAGAGATATGGAGAACTTCCC
CGTTATCAGCTTGGAGAACATCAATGGTGCTGAAAGAGCGGCTATCTTGG
AGAAGATCAACGAGGCCTGTGAGAACTGGGGCTTCTTTGAGCTGGTGAAT
CATGGAATTGAGCCGGAGTTTATGGACACAGTGGAGAGATTGACCAAGGC
GCATTACAGAAAATGTATGGAGCAAAGATTCAAGGAGCTTGTTGCAAGCA
GGGCACTTGAAGGTATCCAAACCGAGGTCAATGACATGGACTGGGAAAGC
ACTTTCTATGTGCGTCACCTCCCTCAGTCGACCATCAATGAAGTCCCAGA
TCTTGATGAGGAATACAGGAAGGTGATGAAGGAATTTGCATTGAAATTGG
AGAAATTAGCAGAGGAGCTATTGGACTTGTTATGCGAGAATCTTGGATTA
GAGAAGGG
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