CK938824

Overview
NameCK938824
Unique NameCK938824
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length670
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938824 vs. ExPASy Swiss-Prot
Match: QORL2_NEMVE (Quinone oxidoreductase-like protein 2 homolog OS=Nematostella vectensis GN=v1g238856 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.487e-19
Identity = 51/116 (43.97%), Postives = 72/116 (62.07%), Query Frame = 3
Query:   54 GVDVLYDPVGGKLTKESLKLLNWGAQILIIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLKELLLWAAKG-LITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 398
            G +V+ + VGG + K+ LK + W   I+ +GFASGEIP IPANI LVKN +  GLYWG++  H P +L +S+ + L +   G L   +IS ++   + N AF  I  RK  GKV+I
Sbjct:  246 GANVIMEAVGGDVFKQCLKCIAWNGYIIPVGFASGEIPQIPANILLVKNCSAVGLYWGAHSKHDPQLLRESVDKTLEYFKNGKLKGPYISASFGLDKVNEAFQMILQRKSTGKVVI 361          
BLAST of CK938824 vs. ExPASy Swiss-Prot
Match: QORL2_BOVIN (Quinone oxidoreductase-like protein 2 OS=Bos taurus PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 7.164e-17
Identity = 45/116 (38.79%), Postives = 67/116 (57.76%), Query Frame = 3
Query:   54 GVDVLYDPVGGKLTKESLKLLNWGAQILIIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLKELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA 401
            GV+V+ D VGG +  E+L+ L +  +I+++GFA G I  +PAN+ L+KN +  GLYWG Y+     V   SL   L +  +G I  HI   +   E N AF  +  RK  GKV+++
Sbjct:  232 GVNVVIDMVGGDIFLEALRSLAYEGRIVVVGFAGGTIASVPANLLLLKNVSAMGLYWGRYRQQNFPVFSRSLSSALQYCQEGRIQPHIGEVFELEEVNDAFLHVTQRKSTGKVLLS 347          
BLAST of CK938824 vs. ExPASy Swiss-Prot
Match: QORL2_RAT (Quinone oxidoreductase-like protein 2 OS=Rattus norvegicus PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.921e-16
Identity = 43/116 (37.07%), Postives = 66/116 (56.90%), Query Frame = 3
Query:   54 GVDVLYDPVGGKLTKESLKLLNWGAQILIIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLKELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA 401
            GV+V  D VGG +  +SL+ L W  +I+++GFA G I  +P+N+ L+KN +  GLYWG Y+     V   S+   L +  +GLI  H    +   + N AF  +  RK  GKV+++
Sbjct:  233 GVNVAIDMVGGDVFLDSLRSLAWEGRIVVLGFAGGNIASVPSNLLLLKNISAMGLYWGRYQHQDFAVFSKSMSTALQYCQQGLIHPHTGAVFKLEKVNDAFLHVMQRKSTGKVLLS 348          
BLAST of CK938824 vs. ExPASy Swiss-Prot
Match: QORL2_MOUSE (Quinone oxidoreductase-like protein 2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.921e-16
Identity = 43/116 (37.07%), Postives = 66/116 (56.90%), Query Frame = 3
Query:   54 GVDVLYDPVGGKLTKESLKLLNWGAQILIIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLKELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA 401
            GV+V  D VGG +  ESL+ L W  +I+++GFA G I  +P+N+ L+KN +  GLYWG Y+     V   S+   + +  +GLI  H    +   + N AF  +  RK  GKV+++
Sbjct:  233 GVNVAIDMVGGDVFLESLRSLAWEGRIVVLGFAGGNIASVPSNLLLLKNISAMGLYWGRYQHQDFAVFSKSMSTAMQYCQQGLIHPHTGAVFKLEKINDAFLHVMQRKSTGKVLLS 348          
The following BLAST results are available for this feature:
BLAST of CK938824 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
QORL2_NEMVE4.487e-1943.97Quinone oxidoreductase-like protein 2 homolog OS=N... [more]
QORL2_BOVIN7.164e-1738.79Quinone oxidoreductase-like protein 2 OS=Bos tauru... [more]
QORL2_RAT7.921e-1637.07Quinone oxidoreductase-like protein 2 OS=Rattus no... [more]
QORL2_MOUSE7.921e-1637.07Quinone oxidoreductase-like protein 2 OS=Mus muscu... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004437_G01 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IIF_G01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938824 ID=CK938824; Name=CK938824; organism=Citrus sinensis; type=EST; length=670bp
GGGGATAACGCCTTACATTTTCATAATAAATTGGAAACTTTGAAGTACTC
AAAGGGGTTGATGTTCTATATGATCCTGTTGGAGGCAAGCTTACTAAAGA
ATCCTTGAAGCTTTTGAACTGGGGTGCTCAAATCTTAATCATTGGCTTTG
CAAGTGGGGAGATTCCAGTAATCCCTGCTAATATTGCTCTTGTTAAGAAC
TGGACGGTACACGGACTTTACTGGGGTAGCTATAAAATACATCGCCCTCA
TGTGCTTGAGGATTCTCTTAAGGAGTTACTCTTATGGGCTGCAAAGGGCT
TGATTACCATCCATATTTCTCATACTTACAGTCCATCAGAGGCCAACCTT
GCCTTCTCTGCCATTGAAGATAGGAAAGTAATTGGAAAGGTGATGATTGC
TTTTGATGACATGAAAAGTATCAGGCCTAGGCTTTAAGTTGATCATCATT
ACTGGGCTGGTATGCAATGGAGAATGTTTCTGCGGCTCTTGATCATCAAA
ATTAGCCTTAATTAATACATGGCACATTTAGTTGCTCTTATATGAGAGAA
AATCTATGACTTTGTTGTGAAGCATGAGAATGCAAGTCCCTGGCAATTAA
GGTTGTCAAAATTTGGATAACAATGAATGCGAAATAAGTACAAAAAAAAA
AAAAAAAAAAAAAAAAAAAA
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