CK938818

Overview
NameCK938818
Unique NameCK938818
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length566
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK938818 vs. ExPASy Swiss-Prot
Match: Y1754_ARATH (Uncharacterized protein At1g77540 OS=Arabidopsis thaliana GN=At1g77540 PE=1 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 6.302e-39
Identity = 75/98 (76.53%), Postives = 85/98 (86.73%), Query Frame = 3 
Query:   18 PKIVWNERKRRFETEDKEAYVEYVVRENGKVMDLVHTYVPSSKRGLGLASHLCGAAFNHAKSHSMSIIPTCSYVSDTYLPRNPTWNSIIYSEDPRSII 311
            PKIVWNE KRRFETED EA++EY +R NGKVMDLVHTYVPS KRGLGLASHLC AAF HA SHS+SIIP+CSYVSDT+LPRNP+W  +I+SE  +S I
Sbjct:   17 PKIVWNEGKRRFETEDHEAFIEYKMRNNGKVMDLVHTYVPSFKRGLGLASHLCVAAFEHASSHSISIIPSCSYVSDTFLPRNPSWKPLIHSEVFKSSI 114
The following BLAST results are available for this feature:
BLAST of CK938818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1754_ARATH6.302e-3976.53Uncharacterized protein At1g77540 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004437_H03 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IIF_H03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938818 ID=CK938818; Name=CK938818; organism=Citrus sinensis; type=EST; length=566bp
GGGGAGAGAAGGCGATACCAAAGATCGTGTGGAACGAGAGGAAGCGGAGG
TTCGAAACGGAAGACAAAGAAGCTTACGTTGAATATGTGGTGAGAGAAAA
TGGAAAAGTGATGGACTTGGTTCACACATACGTACCAAGTTCAAAAAGAG
GCTTAGGCTTGGCTTCTCATCTCTGTGGTGCTGCCTTCAATCACGCCAAA
TCTCACTCCATGTCCATCATCCCCACTTGCTCTTACGTCTCTGACACTTA
TCTTCCTCGGAATCCAACCTGGAATTCTATCATATACTCAGAAGATCCCA
GATCTATCATATGAATGTCGCCATCTTTAACTTTTCAGGTGCCTGTGTAA
TTGTTTGTGATCCAAGTGAAGGTTCTGTTCTCTTATCTCTTAGGCTCACA
CTATTGAGGCCTATAATTATTGCAGATACAGAATAGCCATTTTCCTTTGC
CTATTGCAAATAATATGCGCTCACTGTATTTAAAAAAGTGCACATCCCTG
TGATGTCATAATTTATGTTGGGTTGCCATTTGCTCTCAAAAAAAAAAAAA
AAAAAAAAAAAAAAAA
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