CX675555

Overview
NameCX675555
Unique NameCX675555
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX675555 vs. ExPASy Swiss-Prot
Match: G3BP_SCHPO (Putative G3BP-like protein OS=Schizosaccharomyces pombe GN=nxt3 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.392e-12
Identity = 44/102 (43.14%), Postives = 61/102 (59.80%), Query Frame = 2 
Query:  251 QDIHSLVISLNFT--AIEIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQEKGYFVLNDIFHFLDEEPVYQHPAP-VLSENKFDVQHDASSP 547
            Q+IH+ ++ L+F    + I  ++SL S NGG+++ V G +  K    R KF QTFFLA Q  GYFVLNDIF FL E+   +  +P  + + K DV   AS P
Sbjct:   63 QEIHNKILDLDFQNCKVLISNVDSLASSNGGIVIQVLGEMSNKGKLSR-KFAQTFFLAEQPNGYFVLNDIFRFLREDVEEEEESPDAVEKEKKDV---ASEP 160
The following BLAST results are available for this feature:
BLAST of CX675555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
G3BP_SCHPO4.392e-1243.14Putative G3BP-like protein OS=Schizosaccharomyces ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_63A10_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-63A10-A19-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675555 ID=CX675555; Name=CX675555; organism=Citrus sinensis; type=EST; length=811bp
GTTTATTATAGCCTTTGCAAGTACAAAACTTGTGCTAGTTCCCTTGTTGA
TTGTCTGTGACGATTAGAAGGTGAGTTTGGAATTATGAAGGACTTTCTGC
CTTGGTTAGGCTATACAGCATTCACTTGTTCCTTCAAATTTTTAAACTGT
CCATTTAAAGACTCTGTACCTGTATTTTCATCCTCTGAACGTATAAATGA
CTATCTTAATTAGCTTTCTTTAGAAATTCTTACTTTTATCTATTTGTCTG
CAGGATATTCATTCACTCGTCATCTCGCTAAATTTCACTGCAATTGAGAT
CAAGACAATCAATTCACTTGGTTCTTGGAATGGAGGTGTATTGGTGATGG
TTTCAGGTTCTGTCAAAACTAAGGAATTCTGCAGAAGAAGGAAATTTGTG
CAGACCTTTTTCCTTGCTCCTCAAGAGAAGGGTTACTTCGTTCTTAATGA
TATTTTCCACTTCCTTGATGAAGAACCGGTTTACCAACATCCAGCTCCTG
TGTTGTCAGAAAATAAGTTTGACGTACAACATGATGCTTCTAGCCCCATC
CCTGAACAAGCAGGTACAAGGATAAAGTTTTATATATACAACAAGCGTCA
AGCAGTTTGAGATATGTGATCCTGAAGGACAGGCATATGACAATGTAGTT
GCTTCTTATGATACAAATTTTTGTTTTAATTAGCAGGGATGTTTAAGTTT
TAGGCTGTGACTTTTTATCTGAGCTGATACATTTTAGTTAACTATACAGT
ATAATTGTTGTTCAATGTGTGGATCAACTACAAATGCAAATGGGTTGACT
GTGTTATGATG
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