CK938768

Overview
NameCK938768
Unique NameCK938768
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length797
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9664 contig Csv1_Contig9664:430..1226. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938768 vs. ExPASy Swiss-Prot
Match: CATB_MACFA (Cathepsin B OS=Macaca fascicularis GN=CTSB PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 5.652e-65
Identity = 120/257 (46.69%), Postives = 160/257 (62.26%), Query Frame = 2
Query:   56 KSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXX--YPISAWRYFVHHGVVTEE-------CDPYFDSTGCSH------PGCEPAYPTPKCVRKCVKK-NQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 778
            + LKLP+SFDAR  WPQC TI  I DQG CGSCWAFGAVEA+SDR CIH   ++S+ V+                   YP  AW ++   G+V+         C PY     C H      P C     TPKC + C    +  ++  KHY  ++Y +++  +DIMAEIYKNGPVE +F+VY DF  YKSGVY+H+TG++MGGHA++++GWG  ++G  YW++AN WN  WG +G+FKI RG + CGIE +VVAG+P
Sbjct:   76 EDLKLPESFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGIMCGDGCNGGYPAGAWNFWTRKGLVSGGLYDSHVGCRPY-SIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGV-ENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIP 330          
BLAST of CK938768 vs. ExPASy Swiss-Prot
Match: CATB_PONAB (Cathepsin B OS=Pongo abelii GN=CTSB PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 7.382e-65
Identity = 120/257 (46.69%), Postives = 159/257 (61.87%), Query Frame = 2
Query:   56 KSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXX--YPISAWRYFVHHGVVTEE-------CDPYFDSTGCSH------PGCEPAYPTPKCVRKCVKK-NQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 778
            + LKLP+SFDAR  WPQC TI  I DQG CGSCWAFGAVEA+SDR CIH   ++S+ V+                   YP  AW ++   G+V+         C PY     C H      P C     TPKC + C    +  ++  KHY  ++Y +++   DIMAEIYKNGPVE +F+VY DF  YKSGVY+H+TG++MGGHA++++GWG  ++G  YW++AN WN  WG +G+FKI RG + CGIE +VVAG+P
Sbjct:   76 EDLKLPESFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSGGLYESHVGCRPY-SIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSERDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGV-ENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIP 330          
BLAST of CK938768 vs. ExPASy Swiss-Prot
Match: CATB_HUMAN (Cathepsin B OS=Homo sapiens GN=CTSB PE=1 SV=3)

HSP 1 Score: 246.899 bits (629), Expect = 9.641e-65
Identity = 120/257 (46.69%), Postives = 159/257 (61.87%), Query Frame = 2
Query:   56 KSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXX--YPISAWRYFVHHGVVTEE-------CDPYFDSTGCSH------PGCEPAYPTPKCVRKCVKK-NQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 778
            + LKLP SFDAR  WPQC TI  I DQG CGSCWAFGAVEA+SDR CIH   ++S+ V+                   YP  AW ++   G+V+         C PY     C H      P C     TPKC + C    +  ++  KHY  ++Y +++  +DIMAEIYKNGPVE +F+VY DF  YKSGVY+H+TG++MGGHA++++GWG  ++G  YW++AN WN  WG +G+FKI RG + CGIE +VVAG+P
Sbjct:   76 EDLKLPASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSGGLYESHVGCRPY-SIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGV-ENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIP 330          
BLAST of CK938768 vs. ExPASy Swiss-Prot
Match: CATB_RAT (Cathepsin B OS=Rattus norvegicus GN=Ctsb PE=1 SV=2)

HSP 1 Score: 239.195 bits (609), Expect = 2.010e-62
Identity = 117/260 (45.00%), Postives = 157/260 (60.38%), Query Frame = 2
Query:   56 KSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFG--MNLSLSVNXXXXXXXXXXXXXXXXXYPISAWRYFVHHGVVTEE-------CDPYFDSTGCSH------PGCEPAYPTPKCVRKC-VKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSK 787
            + + LP+SFDAR  W  C TI++I DQG CGSCWAFGAVEA+SDR CIH    +N+ +S                   YP  AW ++   G+V+         C PY     C H      P C     TPKC + C    +  ++  KHY  ++Y ++   ++IMAEIYKNGPVE +FTV+ DF  YKSGVYKH  GDVMGGHA++++GWG  ++G  YW++AN WN  WG +G+FKI RG N CGIE ++VAG+P ++
Sbjct:   76 EDINLPESFDAREQWSNCPTIAQIRDQGSCGSCWAFGAVEAMSDRICIHTNGRVNVEVSAEDLLTCCGIQCGDGCNGGYPSGAWNFWTRKGLVSGGVYNSHIGCLPY-TIPPCEHHVNGSRPPCTGEGDTPKCNKMCEAGYSTSYKEDKHYGYTSYSVSDSEKEIMAEIYKNGPVEGAFTVFSDFLTYKSGVYKHEAGDVMGGHAIRILGWGI-ENGVPYWLVANSWNVDWGDNGFFKILRGENHCGIESEIVAGIPRTQ 333          
BLAST of CK938768 vs. ExPASy Swiss-Prot
Match: CATB_PIG (Cathepsin B OS=Sus scrofa GN=CTSB PE=1 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 3.429e-62
Identity = 116/253 (45.85%), Postives = 152/253 (60.08%), Query Frame = 2
Query:   68 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFG--MNLSLSVNXXXXXXXXXXXXXXXXXYPISAWRYFVHHGVVTEE-------CDPYFDSTGCSH------PGCEPAYPTPKCVRKCVKK-NQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 778
            LPKSFDAR  WP C TI  I DQG CGSCWAFGAVEA+SDR CI     +N+ +S                   +P  AW ++   G+V+         C PY     C H      P C     TPKC + C       ++  KH+  S+Y I+ + ++IMAEIYKNGPVE +FTVY DF  YKSGVY+H+TGD+MGGHA++++GWG  ++G  YW++ N WN  WG +G+FKI RG + CGIE ++VAG+P
Sbjct:   80 LPKSFDAREQWPNCPTIKEIRDQGSCGSCWAFGAVEAISDRICIRSNGRVNVEVSAEDMLTCCGDECGDGCNGGFPSGAWNFWTKKGLVSGGLYDSHVGCRPY-SIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYTPSYKEDKHFGCSSYSISRNEKEIMAEIYKNGPVEGAFTVYSDFLQYKSGVYQHVTGDLMGGHAIRILGWGV-ENGTPYWLVGNSWNTDWGDNGFFKILRGQDHCGIESEIVAGIP 330          
BLAST of CK938768 vs. ExPASy Swiss-Prot
Match: CATB_BOVIN (Cathepsin B OS=Bos taurus GN=CTSB PE=1 SV=5)

HSP 1 Score: 235.343 bits (599), Expect = 2.903e-61
Identity = 112/253 (44.27%), Postives = 154/253 (60.87%), Query Frame = 2
Query:   68 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFG--MNLSLSVNXXXXXXXXXXXXXXXXXYPISAWRYFVHHGVVTEE-------CDPYFDSTGCSH------PGCEPAYPTPKCVRKCVKK-NQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 778
            LP+SFDAR  WP C TI  I DQG CGSCWAFGAVEA+SDR CIH    +N+ +S                   +P  AW ++   G+V+         C PY     C H      P C     TPKC + C    +  ++  KH+  S+Y + ++ ++IMAEIYKNGPVE +F+VY DF  YKSGVY+H++G++MGGHA++++GWG  ++G  YW++ N WN  WG +G+FKI RG + CGIE ++VAG+P
Sbjct:   80 LPESFDAREQWPNCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHSNGRVNVEVSAEDMLTCCGGECGDGCNGGFPSGAWNFWTKKGLVSGGLYNSHVGCRPY-SIPPCEHHVNGSRPPCTGEGDTPKCSKTCEPGYSPSYKEDKHFGCSSYSVANNEKEIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVSGEIMGGHAIRILGWGV-ENGTPYWLVGNSWNTDWGDNGFFKILRGQDHCGIESEIVAGMP 330          
BLAST of CK938768 vs. ExPASy Swiss-Prot
Match: CATB_CHICK (Cathepsin B OS=Gallus gallus GN=CTSB PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.458e-60
Identity = 114/259 (44.02%), Postives = 152/259 (58.69%), Query Frame = 2
Query:   56 KSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXX--YPISAWRYFVHHGVVTEECDPYFDSTGC--------------SHPGCE-PAYPTPKCVRKCVKK-NQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 778
            + + LP +FD R  WP C TIS I DQG CGSCWAFGAVEA+SDR C+H    +S+ V+                   YP  AWRY+   G+V+     Y    GC              S P C      TP+C R C    +  ++  KHY I++Y +    ++IMAEIYKNGPVE +F VYEDF  YKSGVY+H++G+ +GGHA++++GWG  ++G  YW+ AN WN  WG  G+FKI RG + CGIE ++VAG+P
Sbjct:   76 EDMDLPDTFDTRKQWPNCPTISEIRDQGSCGSCWAFGAVEAISDRICVHTNAKVSVEVSAEDLLSCCGFECGMGCNGGYPSGAWRYWTERGLVSGGL--YDSHVGCRAYTIPPCEHHVNGSRPPCTGEGGETPRCSRHCEPGYSPSYKEDKHYGITSYGVPRSEKEIMAEIYKNGPVEGAFIVYEDFLMYKSGVYQHVSGEQVGGHAIRILGWGV-ENGTPYWLAANSWNTDWGITGFFKILRGEDHCGIESEIVAGVP 331          
BLAST of CK938768 vs. ExPASy Swiss-Prot
Match: CATB_MOUSE (Cathepsin B OS=Mus musculus GN=Ctsb PE=1 SV=2)

HSP 1 Score: 231.876 bits (590), Expect = 3.210e-60
Identity = 112/258 (43.41%), Postives = 153/258 (59.30%), Query Frame = 2
Query:   56 KSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFG--MNLSLSVNXXXXXXXXXXXXXXXXXYPISAWRYFVHHGVVTEECDPYFDSTGC--------------SHPGCEPAYPTPKCVRKC-VKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 778
            + + LP++FDAR  W  C TI +I DQG CGSCWAFGAVEA+SDR CIH    +N+ +S                   YP  AW ++   G+V+     Y    GC              S P C     TP+C + C    +  ++  KH+  ++Y +++  ++IMAEIYKNGPVE +FTV+ DF  YKSGVYKH  GD+MGGHA++++GWG  ++G  YW+ AN WN  WG +G+FKI RG N CGIE ++VAG+P
Sbjct:   76 EDIDLPETFDAREQWSNCPTIGQIRDQGSCGSCWAFGAVEAISDRTCIHTNGRVNVEVSAEDLLTCCGIQCGDGCNGGYPSGAWSFWTKKGLVSGGV--YNSHVGCLPYTIPPCEHHVNGSRPPCTGEGDTPRCNKSCEAGYSPSYKEDKHFGYTSYSVSNSVKEIMAEIYKNGPVEGAFTVFSDFLTYKSGVYKHEAGDMMGGHAIRILGWGV-ENGVPYWLAANSWNLDWGDNGFFKILRGENHCGIESEIVAGIP 330          
BLAST of CK938768 vs. ExPASy Swiss-Prot
Match: CPR6_CAEEL (Cathepsin B-like cysteine proteinase 6 OS=Caenorhabditis elegans GN=cpr-6 PE=1 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 9.339e-60
Identity = 121/269 (44.98%), Postives = 154/269 (57.25%), Query Frame = 2
Query:   44 KTHDKSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCI--HFGMNLSLSVNXXXXXXXXXXXXXXXXXYPISAWRYFVHHGVVTEE-------CDPYFDSTGCSH--------PGCEPAYPTPKCVRKCVKK--NQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNL 793
            KT D  L +P+SFD+R  WP+C +I  I DQ  CGSCWAFGAVEA+SDR CI  H  + ++LS +                  P++AWRY+V  G+VT         C PY     C H        P     YPTPKC +KCV    ++ +   K +  SAY +  D E I  E+  +GP+E++F VYEDF +Y  GVY H  G + GGHAVKLIGWG  DDG  YW +AN WN  WG DG+F+I RG +ECGIE  VV G+P   +L
Sbjct:   97 KTKDLDLDIPESFDSRDNWPKCDSIKVIRDQSSCGSCWAFGAVEAMSDRICIASHGELQVTLSADDLLSCCKSCGFGCNGGD-PLAAWRYWVKDGIVTGSNYTANNGCKPY-PFPPCEHHSKKTHFDPCPHDLYPTPKCEKKCVSDYTDKTYSEDKFFGASAYGVKDDVEAIQKELMTHGPLEIAFEVYEDFLNYDGGVYVHTGGKLGGGHAVKLIGWGI-DDGIPYWTVANSWNTDWGEDGFFRILRGVDECGIESGVVGGIPKLNSL 362          
BLAST of CK938768 vs. ExPASy Swiss-Prot
Match: CPR4_CAEEL (Cathepsin B-like cysteine proteinase 4 OS=Caenorhabditis elegans GN=cpr-4 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.004e-58
Identity = 120/267 (44.94%), Postives = 153/267 (57.30%), Query Frame = 2
Query:   35 VPVKTHD-KSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCI--HFGMNLSLSVNXXXXXXXXXXXXXXXXXYPISAWRYFVHHGVVTEE-------CDPYF-----DSTG-CSHPGC-EPAYPTPKCVRKCVKKNQ--LWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 778
            V V  HD     +P +FDAR+ WP C +I+ I DQ  CGSCWAF A EA SDRFCI  +  +N  LS                   YPI+AW+Y V  G  T         C PY      ++ G  + P C +  Y TP CV KC  KN    +   KH+  +AY +      I AEI  +GPVE +FTVYEDF  YK+GVY H TG  +GGHA++++GWGT D+G  YW++AN WN +WG +GYF+I RG+NECGIE  VV G+P
Sbjct:   69 VEVVKHDINEDTIPATFDARTQWPNCMSINNIRDQSDCGSCWAFAAAEAASDRFCIASNGAVNTLLSAEDVLSCCSNCGYGCEGG-YPINAWKYLVKSGFCTGGSYEAQFGCKPYSLAPCGETVGNVTWPSCPDDGYDTPACVNKCTNKNYNVAYTADKHFGSTAYAVGKKVSQIQAEIIAHGPVEAAFTVYEDFYQYKTGVYVHTTGQELGGHAIRILGWGT-DNGTPYWLVANSWNVNWGENGYFRIIRGTNECGIEHAVVGGVP 333          
The following BLAST results are available for this feature:
BLAST of CK938768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
CATB_MACFA5.652e-6546.69Cathepsin B OS=Macaca fascicularis GN=CTSB PE=2 SV... [more]
CATB_PONAB7.382e-6546.69Cathepsin B OS=Pongo abelii GN=CTSB PE=2 SV=1[more]
CATB_HUMAN9.641e-6546.69Cathepsin B OS=Homo sapiens GN=CTSB PE=1 SV=3[more]
CATB_RAT2.010e-6245.00Cathepsin B OS=Rattus norvegicus GN=Ctsb PE=1 SV=2[more]
CATB_PIG3.429e-6245.85Cathepsin B OS=Sus scrofa GN=CTSB PE=1 SV=1[more]
CATB_BOVIN2.903e-6144.27Cathepsin B OS=Bos taurus GN=CTSB PE=1 SV=5[more]
CATB_CHICK2.458e-6044.02Cathepsin B OS=Gallus gallus GN=CTSB PE=2 SV=1[more]
CATB_MOUSE3.210e-6043.41Cathepsin B OS=Mus musculus GN=Ctsb PE=1 SV=2[more]
CPR6_CAEEL9.339e-6044.98Cathepsin B-like cysteine proteinase 6 OS=Caenorha... [more]
CPR4_CAEEL3.004e-5844.94Cathepsin B-like cysteine proteinase 4 OS=Caenorha... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004438_E07 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IIIF_E07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938768 ID=CK938768; Name=CK938768; organism=Citrus sinensis; type=EST; length=797bp
GGGCAAGCCAACACCTAAAGGGCTGCTCTTGGGTGTCCCTGTTAAAACTC
ATGACAAATCCTTGAAGTTGCCTAAAAGCTTTGATGCAAGGTCCGCTTGG
CCACAATGCAGCACCATTAGTAGGATCCTAGATCAGGGCCATTGTGGTTC
TTGTTGGGCTTTTGGTGCTGTTGAAGCGCTATCTGATCGTTTCTGCATCC
ATTTTGGCATGAACCTATCTCTATCAGTTAATGATCTTTTAGCCTGCTGT
GGCTTTTTGTGTGGAGATGGTTGTGACGGGGGTTATCCAATTTCTGCATG
GCGATACTTTGTCCACCATGGTGTTGTTACCGAAGAGTGTGATCCCTACT
TTGATAGTACTGGCTGTTCCCACCCTGGTTGTGAGCCGGCATATCCTACT
CCAAAGTGTGTGAGGAAGTGCGTCAAGAAAAACCAGCTTTGGAGGAATTC
AAAGCACTACAGTATTAGTGCATATAGAATCAATTCTGATCCAGAGGACA
TAATGGCAGAAATTTACAAGAATGGACCAGTTGAAGTTTCCTTCACAGTT
TATGAGGATTTTGCTCACTACAAATCTGGGGTCTACAAACACATCACAGG
CGATGTAATGGGGGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTG
ATGATGGCGAGGATTACTGGATTCTCGCTAATCAGTGGAATAGAAGCTGG
GGTGCGGATGGTTACTTCAAGATTAAAAGAGGATCAAATGAGTGTGGTAT
TGAAGAGGATGTGGTTGCTGGTTTGCCTTCATCCAAAAATCTTGTCA
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