CX675550

Overview
NameCX675550
Unique NameCX675550
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5508 contig Csv1_Contig5508:539..1430. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX675550 vs. ExPASy Swiss-Prot
Match: SCRK2_SOLLC (Fructokinase-2 OS=Solanum lycopersicum GN=FRK2 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 6.446e-15
Identity = 60/177 (33.90%), Postives = 77/177 (43.50%), Query Frame = -2
Query:  361 LWKSRVETRELIKKAWNEADVIEVSRQELEFLLDEECYERKRNYVPQYYAESYEQTKNRRDYYHYTREEISPLWHDGLKFLFVTDGTLRIHYYSPSFDGVVVGTEDVLITPFTCDRTGSGDAVVAAILRKLTTCPEMFENQDVLQRQLRFAVAAGIIAQWTIGAVRGFPTESATQNL 891
            LW S  E ++ IK  W+ ADVI+VS  ELEFL                         N+ D      E    LWH  LK L VT G    +YY+  F G V G         T D TG+GD+ V A+L K+     + E++  L+  LRF+ A G I     GA+   PT S    L
Sbjct:  179 LWPSAEEAKKQIKSIWDSADVIKVSDVELEFLTGS----------------------NKID-----DESAMSLWHPNLKLLLVTLGEKGCNYYTKKFHGTVGGFHVK-----TVDTTGAGDSFVGALLTKIVDDQTILEDEARLKEVLRFSCACGAITTTKKGAIPALPTASEALTL 323          
BLAST of CX675550 vs. ExPASy Swiss-Prot
Match: SCRK2_ORYSJ (Fructokinase-2 OS=Oryza sativa subsp. japonica GN=FRK2 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.419e-15
Identity = 55/177 (31.07%), Postives = 75/177 (42.37%), Query Frame = -2
Query:  361 LWKSRVETRELIKKAWNEADVIEVSRQELEFLLDEECYERKRNYVPQYYAESYEQTKNRRDYYHYTREEISPLWHDGLKFLFVTDGTLRIHYYSPSFDGVVVGTEDVLITPFTCDRTGSGDAVVAAILRKLTTCPEMFENQDVLQRQLRFAVAAGIIAQWTIGAVRGFPTESATQNL 891
            LW S    R  I   W EAD I+VS  E+ FL   +  + K                            +  LW DGLK L VTDG     Y++  F G V G      +  T D TG+GDA V ++L  +     +F N++ L+  L+F+ A G I     GA+   PT +  Q L
Sbjct:  186 LWPSEDAARAGILSIWKEADFIKVSDDEVAFLTQGDANDEK---------------------------NVLSLWFDGLKLLIVTDGEKGCRYFTKDFKGSVPG-----FSVNTVDTTGAGDAFVGSLLVNVAKDDSIFHNEEKLREALKFSNACGAICTTKKGAIPALPTVAVAQEL 330          
BLAST of CX675550 vs. ExPASy Swiss-Prot
Match: SCRK2_ORYSI (Fructokinase-2 OS=Oryza sativa subsp. indica GN=FRK2 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 8.419e-15
Identity = 55/177 (31.07%), Postives = 75/177 (42.37%), Query Frame = -2
Query:  361 LWKSRVETRELIKKAWNEADVIEVSRQELEFLLDEECYERKRNYVPQYYAESYEQTKNRRDYYHYTREEISPLWHDGLKFLFVTDGTLRIHYYSPSFDGVVVGTEDVLITPFTCDRTGSGDAVVAAILRKLTTCPEMFENQDVLQRQLRFAVAAGIIAQWTIGAVRGFPTESATQNL 891
            LW S    R  I   W EAD I+VS  E+ FL   +  + K                            +  LW DGLK L VTDG     Y++  F G V G      +  T D TG+GDA V ++L  +     +F N++ L+  L+F+ A G I     GA+   PT +  Q L
Sbjct:  186 LWPSEDAARAGILSIWKEADFIKVSDDEVAFLTQGDANDEK---------------------------NVLSLWFDGLKLLIVTDGEKGCRYFTKDFKGSVPG-----FSVNTVDTTGAGDAFVGSLLVNVAKDDSIFHNEEKLREALKFSNACGAICTTKKGAIPALPTVAVAQEL 330          
BLAST of CX675550 vs. ExPASy Swiss-Prot
Match: SCRK2_MAIZE (Fructokinase-2 OS=Zea mays GN=FRK2 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.419e-15
Identity = 56/177 (31.64%), Postives = 76/177 (42.94%), Query Frame = -2
Query:  361 LWKSRVETRELIKKAWNEADVIEVSRQELEFLLDEECYERKRNYVPQYYAESYEQTKNRRDYYHYTREEISPLWHDGLKFLFVTDGTLRIHYYSPSFDGVVVGTEDVLITPFTCDRTGSGDAVVAAILRKLTTCPEMFENQDVLQRQLRFAVAAGIIAQWTIGAVRGFPTESATQNL 891
            LW S    RE I   W EAD I+VS  E+ FL   +  + K                            +  LW DGLK L VTDG     Y++  F G V G         T D TG+GDA V ++L  +     +F N++ L+  L+F+ A G I     GA+   PT +  Q+L
Sbjct:  186 LWPSPDAAREGILSIWKEADFIKVSDDEVAFLTRGDANDEK---------------------------NVLSLWFDGLKLLVVTDGDKGCRYFTKDFKGSVPG-----FKVDTVDTTGAGDAFVGSLLVNVAKDDSIFHNEEKLREALKFSNACGAICTTKKGAIPALPTVATAQDL 330          
BLAST of CX675550 vs. ExPASy Swiss-Prot
Match: SCRK1_ORYSJ (Fructokinase-1 OS=Oryza sativa subsp. japonica GN=FRK1 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.436e-14
Identity = 55/179 (30.73%), Postives = 77/179 (43.02%), Query Frame = -2
Query:  355 LWKSRVETRELIKKAWNEADVIEVSRQELEFLLDEECYERKRNYVPQYYAESYEQTKNRRDYYHYTREEISPLWHDGLKFLFVTDGTLRIHYYSPSFDGVVVGTEDVLITPFTCDRTGSGDAVVAAILRKLTTCPEMFENQDVLQRQLRFAVAAGIIAQWTIGAVRGFPTESATQNLKE 891
            LW SR E R  I   W++AD+++VS  ELEFL   +  E                            + +  LW   +K L VT G     YY+  F G V   +   +     D TG+GDA V A+LR++   P   ++Q  L+  ++FA A G I     GA+   PTE     L E
Sbjct:  175 LWPSREEARTKILSIWDQADIVKVSEVELEFLTGIDSVED---------------------------DVVMKLWRPTMKLLLVTLGDQGCKYYARDFRGAVPSYKVQQV-----DTTGAGDAFVGALLRRIVQDPSSLQDQKKLEEAIKFANACGAITATKKGAIPSLPTEVEVLKLME 321          
BLAST of CX675550 vs. ExPASy Swiss-Prot
Match: SCRK1_ORYSI (Fructokinase-1 OS=Oryza sativa subsp. indica GN=FRK1 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.449e-14
Identity = 55/179 (30.73%), Postives = 76/179 (42.46%), Query Frame = -2
Query:  355 LWKSRVETRELIKKAWNEADVIEVSRQELEFLLDEECYERKRNYVPQYYAESYEQTKNRRDYYHYTREEISPLWHDGLKFLFVTDGTLRIHYYSPSFDGVVVGTEDVLITPFTCDRTGSGDAVVAAILRKLTTCPEMFENQDVLQRQLRFAVAAGIIAQWTIGAVRGFPTESATQNLKE 891
            LW SR E R  I   W+ AD+++VS  ELEFL   +  E                            + +  LW   +K L VT G     YY+  F G V   +   +     D TG+GDA V A+LR++   P   ++Q  L+  ++FA A G I     GA+   PTE     L E
Sbjct:  175 LWPSREEARTKILSIWDHADIVKVSEVELEFLTGIDSVED---------------------------DVVMKLWRPTMKLLLVTLGDQGCKYYARDFRGAVPSYKVQQV-----DTTGAGDAFVGALLRRIVQDPSSLQDQKKLEEAIKFANACGAITATKKGAIPSLPTEVEVLKLME 321          
BLAST of CX675550 vs. ExPASy Swiss-Prot
Match: SCRK2_SOLHA (Fructokinase-2 OS=Solanum habrochaites GN=FRK2 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.199e-14
Identity = 59/177 (33.33%), Postives = 76/177 (42.94%), Query Frame = -2
Query:  361 LWKSRVETRELIKKAWNEADVIEVSRQELEFLLDEECYERKRNYVPQYYAESYEQTKNRRDYYHYTREEISPLWHDGLKFLFVTDGTLRIHYYSPSFDGVVVGTEDVLITPFTCDRTGSGDAVVAAILRKLTTCPEMFENQDVLQRQLRFAVAAGIIAQWTIGAVRGFPTESATQNL 891
            LW S  E ++ IK  W+ ADVI+VS  ELEFL                         N+ D      E    LWH  LK L VT G    +YY+  F G V G         T D TG+GD+ V A+L K+     +  ++  L+  LRF+ A G I     GA+   PT S    L
Sbjct:  179 LWPSAEEAKKQIKSIWDSADVIKVSDVELEFLTGS----------------------NKID-----DESAMSLWHPNLKLLLVTLGEKGCNYYTKKFHGTVGGFHVK-----TVDTTGAGDSFVGALLTKIVDDQTILADEARLKEVLRFSCACGAITTTKKGAIPALPTASEALTL 323          
BLAST of CX675550 vs. ExPASy Swiss-Prot
Match: SCRK1_MAIZE (Fructokinase-1 OS=Zea mays GN=FRK1 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.308e-14
Identity = 53/180 (29.44%), Postives = 78/180 (43.33%), Query Frame = -2
Query:  352 LWKSRVETRELIKKAWNEADVIEVSRQELEFLLDEECYERKRNYVPQYYAESYEQTKNRRDYYHYTREEISPLWHDGLKFLFVTDGTLRIHYYSPSFDGVVVGTEDVLITPFTCDRTGSGDAVVAAILRKLTTCPEMFENQDVLQRQLRFAVAAGIIAQWTIGAVRGFPTESATQNLKEQ 891
            LW SR E R  I   W++AD+++VS  ELEFL   +  E                            + +  LW   +K L VT G     YY+  F G V   +   +     D TG+GDA V A+L+++   P   +++  L   ++FA A G I     GA+   PTE+    L E+
Sbjct:  175 LWPSREEARTQILSIWDQADIVKVSEVELEFLTGIDSVED---------------------------DVVMKLWRPTMKLLLVTLGDQGCKYYARDFHGAVPSFKVQQV-----DTTGAGDAFVGALLQRIVKDPSSLQDEKKLVESIKFANACGAITTTKKGAIPSLPTEAEVLQLIEK 322          
BLAST of CX675550 vs. ExPASy Swiss-Prot
Match: SCRK4_ARATH (Probable fructokinase-4 OS=Arabidopsis thaliana GN=At3g59480 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.588e-13
Identity = 58/180 (32.22%), Postives = 79/180 (43.89%), Query Frame = -2
Query:  361 LWKSRVETRELIKKAWNEADVIEVSRQELEFLLDEECYERKRNYVPQYYAESYEQTKNRRDYYHYTREEISPLWHDGLKFLFVTDGTLRIHYYSPSFDGVVVGTEDVLITPF---TCDRTGSGDAVVAAILRKLTTCPEMFENQDVLQRQLRFAVAAGIIAQWTIGAVRGFPTESATQNL 891
            LW S+ E ++ I   W++A+VI+VS +EL FL   +  +                            E    LWH  LK L VT G     YY+ SF G V         PF     D TG+GD+ V A+L K+     + E++  L+  LR A A G I     GA+   PTES  Q+L
Sbjct:  178 LWPSKEEAQKQILSIWDKAEVIKVSDEELMFLTGSDKVDD---------------------------ETALSLWHSNLKLLLVTLGEKGCRYYTKSFRGSV--------DPFHVDAVDTTGAGDSFVGALLCKIVDDRAVLEDEARLREVLRLANACGAITTTKKGAIPALPTESEVQSL 322          
BLAST of CX675550 vs. ExPASy Swiss-Prot
Match: SCRK2_ARATH (Probable fructokinase-2 OS=Arabidopsis thaliana GN=At1g06030 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.074e-13
Identity = 58/182 (31.87%), Postives = 79/182 (43.41%), Query Frame = -2
Query:  349 LWKSRVETRELIKKAWNEADVIEVSRQELEFLLDEECYERKRNYVPQYYAESYEQTKNRRDYYHYTREEISPLWHDGLKFLFVTDGTLRIHYYSPSFDGVVVGTEDVLITPFTCDRTGSGDAVVAAILRKLTTCPEMFENQDVLQRQLRFAVAAGIIAQWTIGAVRGFPTE-SATQNLKEQV 891
            LW S  E R+ I   W++AD+I+VS  ELEFL   +  +                            E    LWH  LK L VT G     YY+  F G V       +     D TG+GD+ V A+L ++     + E ++ L++ LRFA A G I     GA+   PT+  A   LK QV
Sbjct:  179 LWPSPEEARKQIMSIWDKADIIKVSDVELEFLTGNKTIDD---------------------------ETAMSLWHPNLKLLLVTLGENGCRYYTKDFHGSVETFHVDAV-----DTTGAGDSFVGALLNQIVDDQSVLEEEERLRKVLRFANACGAITTTKKGAIPALPTDCEALSFLKIQV 328          
The following BLAST results are available for this feature:
BLAST of CX675550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
SCRK2_SOLLC6.446e-1533.90Fructokinase-2 OS=Solanum lycopersicum GN=FRK2 PE=... [more]
SCRK2_ORYSJ8.419e-1531.07Fructokinase-2 OS=Oryza sativa subsp. japonica GN=... [more]
SCRK2_ORYSI8.419e-1531.07Fructokinase-2 OS=Oryza sativa subsp. indica GN=FR... [more]
SCRK2_MAIZE8.419e-1531.64Fructokinase-2 OS=Zea mays GN=FRK2 PE=1 SV=1[more]
SCRK1_ORYSJ1.436e-1430.73Fructokinase-1 OS=Oryza sativa subsp. japonica GN=... [more]
SCRK1_ORYSI2.449e-1430.73Fructokinase-1 OS=Oryza sativa subsp. indica GN=FR... [more]
SCRK2_SOLHA3.199e-1433.33Fructokinase-2 OS=Solanum habrochaites GN=FRK2 PE=... [more]
SCRK1_MAIZE9.308e-1429.44Fructokinase-1 OS=Zea mays GN=FRK1 PE=1 SV=1[more]
SCRK4_ARATH1.588e-1332.22Probable fructokinase-4 OS=Arabidopsis thaliana GN... [more]
SCRK2_ARATH2.074e-1331.87Probable fructokinase-2 OS=Arabidopsis thaliana GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_63A08_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-63A08-A15-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675550 ID=CX675550; Name=CX675550; organism=Citrus sinensis; type=EST; length=892bp
TTTTTTTGAGGAGAACAACTGAAGAATCTGCCCGTTAAAAGTATACATTG
AAAACGTACAGGAGAAATTGAGAATTGGAGAGAGATGTATTTCAATTACA
AAAAGAATGGTGTCTCGTTCATCCCTTGGCTACAAAACCCACAATATCAG
CAAAGAGTCGTTAATCAAATGGAACTTCAAGATGAATAGGTTGAATCTCA
ACAAAGTTGATTAATGTACATGATGCAGCCTTTTATCCAGGAAATCCACC
CCTTCTTAATTGGATACAAATTTTTCATAATCTGCCTGTGGAATTACATC
ATCATGATCCATATCTGTAACTCTTAACTACCACATTGAAGGTACATAGA
CCTGTTCTTTCAGATTTTGTGTTGCACTTTCTGTAGGAAAACCTCTGACC
GCACCAATTGTCCACTGCGCTATGATCCCTGCTGCAACTGCAAAGCGAAG
CTGCCTTTGCAATACATCTTGATTTTCAAACATCTCAGGGCAAGTCGTCA
GCTTTCTCAAAATGGCAGCAACCACAGCATCACCAGAACCAGTCCTATCA
CAAGTGAAAGGTGTTATCAGCACATCTTCTGTTCCAACCACCACACCATC
AAATGACGGGGAATAATAATGAATCCGAAGAGTTCCGTCAGTTACAAACA
AAAATTTAAGTCCATCATGCCACAATGGAGAGATTTCCTCACGAGTATAA
TGATAATAATCCCGCCGGTTCTTAGTTTGTTCATAACTTTCCGCATAATA
TTGTGGAACATAATTTCTTTTCCTCTCATAACACTCTTCATCTAAAAGAA
ATTCCAGCTCTTGCCTTGACACCTCAATAACATCTGCCTCATTCCATGCT
TTCTTAATCAGTTCCCTGGTCTCAACACGTGATTTCCACAAA
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