CX675549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675549 vs. ExPASy Swiss-Prot
Match: CWC22_DANRE (Pre-mRNA-splicing factor CWC22 homolog OS=Danio rerio GN=cwc22 PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 8.585e-52 Identity = 96/154 (62.34%), Postives = 122/154 (79.22%), Query Frame = -3 Query: 293 GLLGQRFCMINKVHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTHALPWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFAINFFTSIGQSGITENLREYLKNMPRLIMQQQKQV 754 GLL RFC++ K + E+FE F +QY IHRLETNKLRNVA+ FAHLL T ++PW VL +R++E+ TTSSSRIF+KILFQEL ++G+ LNERL D T+Q FE +FPRDNP+NTRFAINFFTSIG G+T+ LRE+LKN P++IM Q ++V Sbjct: 602 GLLAGRFCLLKKEYMESFEAIFQEQYETIHRLETNKLRNVARIFAHLLYTDSVPWSVLECVRMSEDTTTSSSRIFVKILFQELCAYMGLPKLNERLKDTTLQPFFEGLFPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNAPKMIMTQNQEV 755
BLAST of CX675549 vs. ExPASy Swiss-Prot
Match: CWC22_CHICK (Pre-mRNA-splicing factor CWC22 homolog OS=Gallus gallus GN=CWC22 PE=2 SV=2) HSP 1 Score: 202.216 bits (513), Expect = 2.498e-51 Identity = 99/154 (64.29%), Postives = 120/154 (77.92%), Query Frame = -3 Query: 293 GLLGQRFCMINKVHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTHALPWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFAINFFTSIGQSGITENLREYLKNMPRLIMQQQKQV 754 GLL RFCM+ K + E+FE F +QY IHRLETNKLRNVAK FAHLL T ++PW VL I L+EE TTSSSRIF+KI FQELSE++G+ LN RL D T+Q FE + PRDNP+NTRFAINFFTSIG G+T+ LRE+LKN P++IM Q++ V Sbjct: 511 GLLAGRFCMLKKEYMESFEAIFKEQYDTIHRLETNKLRNVAKMFAHLLYTDSIPWSVLECIILSEETTTSSSRIFVKIFFQELSEYMGLPNLNARLKDITLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNAPKMIMTQKQDV 664
BLAST of CX675549 vs. ExPASy Swiss-Prot
Match: CWC22_PONAB (Pre-mRNA-splicing factor CWC22 homolog OS=Pongo abelii GN=CWC22 PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 5.565e-51 Identity = 98/154 (63.64%), Postives = 119/154 (77.27%), Query Frame = -3 Query: 293 GLLGQRFCMINKVHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTHALPWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFAINFFTSIGQSGITENLREYLKNMPRLIMQQQKQV 754 GLL RFCM+ K + E+FE F +QY IHRLETNKLRNVAK FAHLL T +LPW VL I+L+EE TTSSSRIF+KI FQEL E++G+ LN RL D T+Q FE + PRDNP+NTRFAINFFTSIG G+T+ LRE+LKN P++I+ Q+ V Sbjct: 508 GLLAGRFCMLKKEYMESFEGIFKEQYDTIHRLETNKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNTPKVIVAQKPDV 661
BLAST of CX675549 vs. ExPASy Swiss-Prot
Match: CWC22_MOUSE (Pre-mRNA-splicing factor CWC22 homolog OS=Mus musculus GN=Cwc22 PE=1 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 5.565e-51 Identity = 97/153 (63.40%), Postives = 119/153 (77.78%), Query Frame = -3 Query: 296 GLLGQRFCMINKVHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTHALPWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFAINFFTSIGQSGITENLREYLKNMPRLIMQQQKQ 754 GLL RFCM+ K + E+FE F +QY IHRLETNKLRNVAK FAHLL T +LPW VL I+L+EE TTSSSRIF+KI FQEL E++G+ LN RL D T+Q FE + PRDNP+NTRFAINFFTSIG G+T+ LRE+LKN P++I+ Q+ + Sbjct: 507 GLLAGRFCMLKKEYMESFESIFKEQYDTIHRLETNKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNTPKVIVAQKPE 659
BLAST of CX675549 vs. ExPASy Swiss-Prot
Match: CWC22_HUMAN (Pre-mRNA-splicing factor CWC22 homolog OS=Homo sapiens GN=CWC22 PE=1 SV=2) HSP 1 Score: 201.06 bits (510), Expect = 5.565e-51 Identity = 98/154 (63.64%), Postives = 119/154 (77.27%), Query Frame = -3 Query: 293 GLLGQRFCMINKVHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTHALPWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFAINFFTSIGQSGITENLREYLKNMPRLIMQQQKQV 754 GLL RFCM+ K + E+FE F +QY IHRLETNKLRNVAK FAHLL T +LPW VL I+L+EE TTSSSRIF+KI FQEL E++G+ LN RL D T+Q FE + PRDNP+NTRFAINFFTSIG G+T+ LRE+LKN P++I+ Q+ V Sbjct: 508 GLLAGRFCMLKKEYMESFEGIFKEQYDTIHRLETNKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNTPKVIVAQKPDV 661
BLAST of CX675549 vs. ExPASy Swiss-Prot
Match: CWC22_XENLA (Pre-mRNA-splicing factor CWC22 homolog OS=Xenopus laevis GN=cwc22 PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.053e-49 Identity = 95/154 (61.69%), Postives = 117/154 (75.97%), Query Frame = -3 Query: 293 GLLGQRFCMINKVHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTHALPWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFAINFFTSIGQSGITENLREYLKNMPRLIMQQQKQV 754 GLL RFC++ K + E FE F +Q+ IHRLETNKLRNVAK FAHLL T +LPW VL + L+EE TTSSSRIF+KI FQEL E++G+ LN RL D T+Q F+ + P DNPKNTRFAINFFTSIG G+T+ LRE+LKN P++IM Q++ V Sbjct: 555 GLLAGRFCLLKKEYLEAFENIFKEQFETIHRLETNKLRNVAKMFAHLLYTDSLPWSVLECMNLSEETTTSSSRIFVKIFFQELCEYMGLPKLNARLKDVTLQPFFQGLLPMDNPKNTRFAINFFTSIGLGGLTDELREHLKNAPKMIMTQKQNV 708
BLAST of CX675549 vs. ExPASy Swiss-Prot
Match: CWC22_EMENI (Pre-mRNA-splicing factor cwc22 OS=Emericella nidulans GN=cwc22 PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.585e-48 Identity = 89/145 (61.38%), Postives = 114/145 (78.62%), Query Frame = -3 Query: 320 GLLGQRFCMINKVHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTHALPWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFAINFFTSIGQSGITENLREYLKNMPR 754 GL+G+RF IN++ + FE F + Y IHR ETN+LRN+A+FF H+L T AL WHVL+ I L EE+TTSSSRIFIKILFQ+L+EHLG+ L ER+TD ++ SFE +FP DNP+NTRF+IN+FTSIG +TE LRE+LKNMP+ Sbjct: 298 GLIGERFAKINRLWSDLFENAFAKYYDTIHRYETNRLRNIARFFGHMLSTDALGWHVLSVIHLNEEETTSSSRIFIKILFQDLAEHLGLPKLRERMTDELLRPSFEGLFPTDNPRNTRFSINYFTSIGFGVLTEELREFLKNMPK 442
BLAST of CX675549 vs. ExPASy Swiss-Prot
Match: CWC22_DROME (Pre-mRNA-splicing factor CWC22 homolog OS=Drosophila melanogaster GN=ncm PE=1 SV=3) HSP 1 Score: 184.111 bits (466), Expect = 7.039e-46 Identity = 87/147 (59.18%), Postives = 113/147 (76.87%), Query Frame = -3 Query: 314 GLLGQRFCMINKVHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTHALPWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFAINFFTSIGQSGITENLREYLKNMPRLI 754 GLL QRFC INK++ FE+ F Y HRL+TN+LRNV+KFFAHLL T A+ W VL I+L E+DTTSSSRIFIKILFQEL+E++G+ LN +L D + +S +FP+DNP+NTRF+INFFTSIG G+T++LR +LKN P+ + Sbjct: 764 GLLAQRFCNINKIYIPPFEEIFKDTYQTTHRLDTNRLRNVSKFFAHLLFTDAISWDVLECIQLNEDDTTSSSRIFIKILFQELAEYMGLGKLNAKLKDDVLVESIAGLFPKDNPRNTRFSINFFTSIGLGGLTDDLRRFLKNAPKSV 910
BLAST of CX675549 vs. ExPASy Swiss-Prot
Match: CWC22_ASPFU (Pre-mRNA-splicing factor cwc22 OS=Aspergillus fumigatus GN=cwc22 PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 7.039e-46 Identity = 83/145 (57.24%), Postives = 113/145 (77.93%), Query Frame = -3 Query: 320 GLLGQRFCMINKVHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTHALPWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFAINFFTSIGQSGITENLREYLKNMPR 754 GL+G+RF IN++ + FE F + Y IHR ETN+LRN+A+FF H+L T A+ WHV++ I L E++TTSSSRIFIKILFQ+L EHLG+ L ER+ D ++ SFE +FP DNP+NTRF+IN+FTSIG +TE++RE+LKN+P+ Sbjct: 481 GLIGERFAKINRLWSDLFEAAFAKYYDTIHRYETNRLRNIARFFGHMLSTDAIGWHVMSVIHLNEDETTSSSRIFIKILFQDLGEHLGLAKLQERMRDEILRPSFEGLFPLDNPRNTRFSINYFTSIGFGILTEDMREHLKNLPK 625
BLAST of CX675549 vs. ExPASy Swiss-Prot
Match: CWC22_USTMA (Pre-mRNA-splicing factor CWC22 OS=Ustilago maydis GN=CWC22 PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 9.514e-43 Identity = 75/152 (49.34%), Postives = 114/152 (75.00%), Query Frame = -3 Query: 299 GLLGQRFCMINKVHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTHALPWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFAINFFTSIGQSGITENLREYLKNMPRLIMQQQK 754 G +G+RFC +++ + F + F Y IHR ETN+LRN+A+FF HL T ++ W ++ I + EEDTTSSSRIF+KI+FQE+ + LG++ L ER +P++Q++++ +FP DNPK+TRF+IN+FTSIG +TE +REYLKN P+L++ Q++ Sbjct: 508 GNMGERFCKLHRKWADTFAQSFSNYYDTIHRYETNRLRNIARFFGHLFSTDSISWASMSVIHMNEEDTTSSSRIFVKIMFQEMQQQLGLKELAERFKEPSLQENWKGLFPTDNPKSTRFSINYFTSIGLGVLTEEMREYLKNAPKLLLAQRQ 659 The following BLAST results are available for this feature:
BLAST of CX675549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675549 ID=CX675549; Name=CX675549; organism=Citrus sinensis; type=EST; length=756bpback to top |