FC921795

Overview
NameFC921795
Unique NameFC921795
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length388
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13532 contig Csv1_Contig13532:1..388. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921795 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.115e-17
Identity = 49/130 (37.69%), Postives = 74/130 (56.92%), Query Frame = 3
Query:    3 RADRCISEGLSSVMYRASFGDDASTSKKFEA----TVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIY--GRSDGPPIDWNTRVKIALCAAQGLTFLHEE 371
            R+D  + EG    ++R    +   T  K  +     V RLNP   QG +E++ ++N L  L HPNL KL+G+   D  +QR+L+YE +  GSL+  ++  G  D  P+ W  R+K+AL AA+GL FLH +
Sbjct:   62 RSDSVVGEGGFGCVFRGWLDETTLTPTKSSSGLVIAVKRLNPDGFQGHREWLTEINYLGQLSHPNLVKLIGYCLED--EQRLLVYEFMHKGSLENHLFANGNKDFKPLSWILRIKVALDAAKGLAFLHSD 189          
BLAST of FC921795 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.030e-15
Identity = 46/115 (40.00%), Postives = 68/115 (59.13%), Query Frame = 3
Query:   57 FGDDASTSKKFEATVTRLNP----------SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGP-PIDWNTRVKIALCAAQGLTFLHE 368
            F  +    K F+ T+ +L+             QG++EF+ +V TL+   HPNL KL+GF A    DQR+L+YE +  GSL+  ++    G  P+DWNTR+KIA  AA+GL +LH+
Sbjct:  108 FLGEGGFGKVFKGTIEKLDQVVAIKQLDRNGVQGIREFVVEVLTLSLADHPNLVKLIGFCAE--GDQRLLVYEYMPQGSLEDHLHVLPSGKKPLDWNTRMKIAAGAARGLEYLHD 220          
BLAST of FC921795 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 2.496e-14
Identity = 46/131 (35.11%), Postives = 71/131 (54.20%), Query Frame = 3
Query:    3 RADRCISEGLSSVMYRASFGDDASTSKK----FEATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG-PPIDWNTRVKIALCAAQGLTFLHEEGP 377
            R D  + EG    +++    + +    K        V RLN    QG +E++ ++N L  L HPNL KL+G+   +  + R+L+YE +  GSL+  ++ R     P+ WNTRV++AL AA+GL FLH   P
Sbjct:   69 RPDSVVGEGGFGCVFKGWIDESSLAPSKPGTGIVIAVKRLNQEGFQGHREWLAEINYLGQLDHPNLVKLIGYCLEE--EHRLLVYEFMTRGSLENHLFRRGTFYQPLSWNTRVRMALGAARGLAFLHNAQP 197          
BLAST of FC921795 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.487e-14
Identity = 39/87 (44.83%), Postives = 57/87 (65.52%), Query Frame = 3
Query:  117 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGP--PIDWNTRVKIALCAAQGLTFLHEE 371
            S QG +EF+N++  +++LQHPNL KL G       +Q +L+YE L +  L R ++G+ +     +DW+TR KI L  A+GLTFLHEE
Sbjct:  712 SRQGNREFVNEIGMISALQHPNLVKLYGCCVE--GNQLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLGIAKGLTFLHEE 796          
BLAST of FC921795 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.239e-13
Identity = 47/117 (40.17%), Postives = 69/117 (58.97%), Query Frame = 3
Query:   18 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGS-LDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLH 365
            I EG    +YR +  D    + K      R + S+QG +EF N++N L+++QH NL  LLG+   +  DQ++L+Y  + +GS LDRL    S    +DW TR+ IAL AA+GL +LH
Sbjct:  602 IGEGGFGSVYRGTLDDGQEVAVK-----VRSSTSTQGTREFDNELNLLSAIQHENLVPLLGY--CNEYDQQILVYPFMSNGSLLDRLYGEASKRKILDWPTRLSIALGAARGLAYLH 711          
BLAST of FC921795 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.113e-13
Identity = 45/127 (35.43%), Postives = 70/127 (55.12%), Query Frame = 3
Query:    3 RADRCISEGLSSVMYRASFGDDASTSKK----FEATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE 368
            R D  + EG    +++      + T+ +        V +L P   QG KE++ +VN L  L HPNL  L+G+ A    + R+L+YE +  GSL+  ++ R    P+ W  R+K+A+ AA+GLTFLHE
Sbjct:   87 RQDNLLGEGGFGCVFKGWIDQTSLTASRPGSGIVVAVKQLKPEGFQGHKEWLTEVNYLGQLSHPNLVLLVGYCAE--GENRLLVYEFMPKGSLENHLFRRG-AQPLTWAIRMKVAVGAAKGLTFLHE 210          
BLAST of FC921795 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 2.760e-13
Identity = 43/99 (43.43%), Postives = 61/99 (61.62%), Query Frame = 3
Query:   90 EATVTRLN-PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQ 383
            E  V RL+  S QG  EFIN+V+ +A LQH NL +LLGF  +   ++R+LIYE   + SLD  I+  +    +DW TR +I    A+GL +LHE+  F+
Sbjct:  368 EIAVKRLSMKSGQGDNEFINEVSLVAKLQHRNLVRLLGFCLQ--GEERILIYEFFKNTSLDHYIFDSNRRMILDWETRYRIISGVARGLLYLHEDSRFK 464          
BLAST of FC921795 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.031e-13
Identity = 45/117 (38.46%), Postives = 68/117 (58.12%), Query Frame = 3
Query:   18 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGS-LDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLH 365
            I EG    +YR +  D    + K  +       S+QG +EF N++N L+++QH NL  LLG+   +  DQ++L+Y  + +GS LDRL    +    +DW TR+ IAL AA+GL +LH
Sbjct:  601 IGEGGFGSVYRGTLDDGQEVAVKVRSAT-----STQGTREFDNELNLLSAIQHENLVPLLGY--CNEYDQQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLH 710          
BLAST of FC921795 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.031e-13
Identity = 44/126 (34.92%), Postives = 70/126 (55.56%), Query Frame = 3
Query:    3 RADRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGR--SDGPPIDWNTRVKIALCAAQGLTFLHEE 371
            + +R +  G    ++R +    +S     +  V ++ P+S QGV+EFI ++ +L  L+H NL  L G+  +   +  +LIY+ + +GSLD L+Y R    G  + WN R KIA   A GL +LHEE
Sbjct:  362 KENRIVGTGGFGTVFRGNLSSPSSD----QIAVKKITPNSMQGVREFIAEIESLGRLRHKNLVNLQGWCKQ--KNDLLLIYDYIPNGSLDSLLYSRPRQSGVVLSWNARFKIAKGIASGLLYLHEE 481          
BLAST of FC921795 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.049e-12
Identity = 45/129 (34.88%), Postives = 69/129 (53.49%), Query Frame = 3
Query:    3 RADRCISEGLSSVMYRASFGDDASTSKK----FEATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGR-SDGPPIDWNTRVKIALCAAQGLTFLHEE 371
            R D  I EG    +++    +   T  K        V +LN    QG +E++ ++N L  L HPNL KL+G+   D  + R+L+YE +  GSL+  ++ R +   P+ W  RV +AL AA+GL FLH +
Sbjct:   68 RPDSVIGEGGFGCVFKGWLDESTLTPTKPGTGLVIAVKKLNQEGFQGHREWLTEINYLGQLSHPNLVKLIGYCLED--EHRLLVYEFMQKGSLENHLFRRGAYFKPLPWFLRVNVALDAAKGLAFLHSD 194          
The following BLAST results are available for this feature:
BLAST of FC921795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
Y3545_ARATH4.115e-1737.69Probable receptor-like protein kinase At3g55450 OS... [more]
RLCK7_ARATH5.030e-1540.00Probable serine/threonine-protein kinase RLCKVII O... [more]
NAK_ARATH2.496e-1435.11Probable serine/threonine-protein kinase NAK OS=Ar... [more]
Y1765_ARATH9.487e-1444.83Probable LRR receptor-like serine/threonine-protei... [more]
NORK_MEDTR1.239e-1340.17Nodulation receptor kinase OS=Medicago truncatula ... [more]
APK2A_ARATH2.113e-1335.43Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
CRK41_ARATH2.760e-1343.43Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
NORK_PEA8.031e-1338.46Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
LRKA2_ARATH8.031e-1334.92Lectin-domain containing receptor kinase A4.2 OS=A... [more]
BIK1_ARATH1.049e-1234.88Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionC06052D11T7 RindPdigS Citrus sinensis cDNA clone C06052D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921795 ID=FC921795; Name=FC921795; organism=Citrus sinensis; type=EST; length=388bp
CGCGGGCAGATCGATGCATTTCAGAAGGTCTATCCTCTGTAATGTATAGG
GCTTCGTTTGGAGATGATGCTTCAACTTCAAAAAAGTTTGAAGCCACTGT
TACTCGCCTTAATCCATCCAGCCAGGGTGTGAAGGAATTTATAAATGATG
TAAACACCCTTGCATCATTGCAACATCCAAATCTCTGTAAATTGCTTGGT
TTTCATGCACGTGATGGATCGGACCAGAGAATGTTGATCTATGAGAGACT
TTTTCATGGAAGCTTGGACCGTCTTATTTATGGGAGATCAGATGGGCCTC
CAATTGATTGGAACACCAGGGTAAAAATTGCATTATGTGCTGCACAAGGT
CTTACCTTCTTGCATGAAGAAGGGCCTTTTCAGGCAAA
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