CK938663
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK938663 vs. ExPASy Swiss-Prot
Match: RBX1A_ARATH (RING-box protein 1a OS=Arabidopsis thaliana GN=RBX1A PE=1 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 3.611e-56 Identity = 100/118 (84.75%), Postives = 100/118 (84.75%), Query Frame = 3 Query: 108 MATLDSDVPMIPVGEXXXXXXXXXXXXXXXRFEIKKWSAVALWAWGIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 461 MATLDSDV MIP GE RFEIKKWSAVALWAW IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH Sbjct: 1 MATLDSDVTMIPAGEASSSVAASSSNKKAKRFEIKKWSAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118
BLAST of CK938663 vs. ExPASy Swiss-Prot
Match: RBX1_SALSA (RING-box protein 1 OS=Salmo salar GN=rbx1 PE=2 SV=2) HSP 1 Score: 195.667 bits (496), Expect = 1.919e-49 Identity = 84/88 (95.45%), Postives = 86/88 (97.73%), Query Frame = 3 Query: 198 RFEIKKWSAVALWAWGIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 461 RFE+KKW+AVALWAW IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN EWEFQKYGH Sbjct: 21 RFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 108
BLAST of CK938663 vs. ExPASy Swiss-Prot
Match: RBX1_MOUSE (RING-box protein 1 OS=Mus musculus GN=Rbx1 PE=1 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 1.919e-49 Identity = 84/88 (95.45%), Postives = 86/88 (97.73%), Query Frame = 3 Query: 198 RFEIKKWSAVALWAWGIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 461 RFE+KKW+AVALWAW IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN EWEFQKYGH Sbjct: 21 RFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 108
BLAST of CK938663 vs. ExPASy Swiss-Prot
Match: RBX1_HUMAN (RING-box protein 1 OS=Homo sapiens GN=RBX1 PE=1 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 1.919e-49 Identity = 84/88 (95.45%), Postives = 86/88 (97.73%), Query Frame = 3 Query: 198 RFEIKKWSAVALWAWGIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 461 RFE+KKW+AVALWAW IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN EWEFQKYGH Sbjct: 21 RFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 108
BLAST of CK938663 vs. ExPASy Swiss-Prot
Match: RBX1B_ARATH (RING-box protein 1b OS=Arabidopsis thaliana GN=RBX1B PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.507e-49 Identity = 92/118 (77.97%), Postives = 95/118 (80.51%), Query Frame = 3 Query: 108 MATLDSDVPMIPVGEXXXXXXXXXXXXXXXRFEIKKWSAVALWAWGIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 461 MA+L+SDV M GE RFE+KKWSAVALWAW IVVDNCAICRNHIMDLCIEC ANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLD EWEFQKYGH Sbjct: 1 MASLNSDVIM---GESSSISVPSSSSKNSKRFELKKWSAVALWAWDIVVDNCAICRNHIMDLCIECLANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDVCEWEFQKYGH 115
BLAST of CK938663 vs. ExPASy Swiss-Prot
Match: RBX1A_DROME (RING-box protein 1A OS=Drosophila melanogaster GN=Roc1a PE=1 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 4.276e-49 Identity = 83/88 (94.32%), Postives = 86/88 (97.73%), Query Frame = 3 Query: 198 RFEIKKWSAVALWAWGIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 461 RFE+KKW+AVALWAW IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN EW+FQKYGH Sbjct: 21 RFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWDFQKYGH 108
BLAST of CK938663 vs. ExPASy Swiss-Prot
Match: RBX1_CAEEL (RING-box protein 1 OS=Caenorhabditis elegans GN=rbx-1 PE=1 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 5.779e-46 Identity = 78/88 (88.64%), Postives = 81/88 (92.05%), Query Frame = 3 Query: 198 RFEIKKWSAVALWAWGIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 461 RFE+KKWSAVALWAW I VDNCAICRNHIMDLCIECQANQA+ +ECTVAWG CNHAFHFHCISRWLKTRQVCPLDN EWEFQKYGH Sbjct: 23 RFEVKKWSAVALWAWDIQVDNCAICRNHIMDLCIECQANQAAGLKDECTVAWGNCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 110
BLAST of CK938663 vs. ExPASy Swiss-Prot
Match: RBX1_DICDI (RING-box protein 1 OS=Dictyostelium discoideum GN=rbx1 PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.287e-45 Identity = 76/87 (87.36%), Postives = 83/87 (95.40%), Query Frame = 3 Query: 198 RFEIKKWSAVALWAWGIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYG 458 +FE+K+W+AVALW W IVVDNCAICRNHIMDLCIECQANQAS TSEECTVAWG+CNHAFHFHCISRWLK+RQVCPLDN +WEFQKYG Sbjct: 17 KFEVKRWNAVALWIWDIVVDNCAICRNHIMDLCIECQANQASNTSEECTVAWGICNHAFHFHCISRWLKSRQVCPLDNRDWEFQKYG 103
BLAST of CK938663 vs. ExPASy Swiss-Prot
Match: RBX1_SCHPO (RING-box protein pip1 OS=Schizosaccharomyces pombe GN=pip1 PE=1 SV=2) HSP 1 Score: 178.718 bits (452), Expect = 2.428e-44 Identity = 75/88 (85.23%), Postives = 79/88 (89.77%), Query Frame = 3 Query: 198 RFEIKKWSAVALWAWGIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 461 RFEIKKW+AVALW W IVVDNCAICRNHIMDLCIECQAN SA ++ECTVAWG CNHAFHFHCISRWL TR VCPLDN EWEFQ+YGH Sbjct: 20 RFEIKKWNAVALWQWDIVVDNCAICRNHIMDLCIECQANTDSAAAQECTVAWGTCNHAFHFHCISRWLNTRNVCPLDNREWEFQRYGH 107
BLAST of CK938663 vs. ExPASy Swiss-Prot
Match: RBX1B_DROME (RING-box protein 1B OS=Drosophila melanogaster GN=Roc1b PE=1 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 1.427e-36 Identity = 63/87 (72.41%), Postives = 73/87 (83.91%), Query Frame = 3 Query: 198 RFEIKKWSAVALWAWGIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYG 458 RF +KKW A A+W W + VDNCAICRNHIM+LCIECQA+ +A +ECTVAWG CNHAFH+HCI+RWLKTR VCPLDN EW +QKYG Sbjct: 36 RFVVKKWVAHAMWGWDVAVDNCAICRNHIMNLCIECQADP-NANQDECTVAWGECNHAFHYHCIARWLKTRLVCPLDNKEWVYQKYG 121 The following BLAST results are available for this feature:
BLAST of CK938663 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938663 ID=CK938663; Name=CK938663; organism=Citrus sinensis; type=EST; length=679bpback to top |